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CAN33_21480-T1, CAN33_21480-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_21480-T1
Unique NameCAN33_21480-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:3326763..3328101+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_21480-T1 ID=CAN33_21480-T1|Name=CAN33_21480-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1339bp|location=Sequence derived from alignment at NKJJ01000011.1:3326763..3328101+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCAAAAGACGACCTCAAGGCTCACGCGGCCTCCAACGAAGACTT
CTACGCCCTCCTCGACATTTCCCCCGCAGCTGCAGAATCAGAAATCCGTC
GCGCCTACCGCCGAACTGCACTGAAATATCACCCCGACAAAATCGCGAAC
CCCACACCTGCAGACATCGACAAGTTCCATCTGCTCCAGATTGCCTACGA
TGTTCTCTCCGATCCGTCGGTGCGGCAGCTCTACGATAATGCGCGTGAAG
CGCGCCAGCGCAAGCAGCGCGAGCGGGATATGATGGATGCAGCGAAGAGG
AAGATGAGGGAGGACTTGGAGGCTAGGGAGCGCGCGGGGCTGCGGCGATG
GGCGGCGCTGGTGCGCAACGCGGTGTGAAGCGGCCGTGGATGGGGAGCGG
CGCTGATGATGATGCTGAAGCTAAGTTGCAGAGAGAGATTGAGCGGATTG
CGGAGGATGGACGAAGGCGACGACGCGAGGCGGAGGAACGGCTGAAGCAG
GAAATGGAGGAGGAAGAGAAGTTGATGCGCCAGGAGGAGGAAGAGGCACA
ACGGGCGGCGGACAGGAGTAGTCAGAAGGTTGATCGCTCGAAAGAAGGCG
GTACAAATGTGCCGGAGTTAGAACGAGGTGTCAAGGTGCGCTGGGTACGT
GAAGGACGCGGGCTGGACCTGGATAAAGATCGGTTGATCTCTCTGTTCTC
GTCTTACGGCAAGATCGAAAATATCCTGCTCCTTAAAGACAAACGACAAC
GTCTCGGGGATAATCGCGAGAAAAAGACGGTTGCGACAGGTGTGGTGATA
TTCGCTTCCATTGTCAGTGCCCACGCTGCTGTTCTGGATAGTGAGAAGAA
GGTGCGTCAGAGTGTTGGGCAAGCGGATAGCGACTGGTCTGCCGTCGAAT
CCGTCTTCTGGGCGTCTGGCAGTCAACCCGACCTGAGCGTTGAATCCAAC
GGCTATTCTACTGCTTCCACCCCCTCCGAACAGGGCACCGCAGCACCCAA
CTCTTCCGGGCCAGTTCCTTCAGCTGCTCCTCCCAAACCGTCTTTCAACT
TTGCTGGGTTGAAGTCAGCAGCGTCTGATGCCTCCAGCAAGAATCCCGGA
AAGGCACCATCTTTCGGTTCCTTTGCTGCTGGCGCGGCAGCAAAGTCGGC
GAAACCTGCGCCTGCTGGCTCGACCAATGGCTCGAGCGCTCCGAGCATGG
CGGAGTTGACGTTGATGCGGCTAAGAAATGCGCAACGTGAGAAGGAACGC
AAGGCCCTTGAAGAGCAGCTTCGGAAGGAAGATGAAGCTGCAGATGTGGC
TGAGGCCGAAACTAAAGTATAGATGCGATATTTCCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:3326763..3328101+

>CAN33_21480-T1 ID=CAN33_21480-T1|Name=CAN33_21480-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3114bp|location=Sequence derived from alignment at NKJJ01000011.1:3326763..3328101+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCAAAAGACGACCTCAAGGCTCACGCGGCCTCCAACGAAGACTT
CTACGCCCTCCTCGACATTTCCCCCGCAGCTGCAGAATCAGAAATCCGTC
GCGCCTACCGCCGAACTGCACTGAAATATCACCCCGACAAAATCGCGAAC
CCCACACCTGCAGACATCGACAAGTTCCATCTGCTCCAGATTGCCTACGA
TGTTCTCTCCGATCCGTCGGTGCGGCAGCTCTACGATAATGCGCGTGAAG
CGCGCCAGCGCAAGCAGCGCGAGCGGGATATGATGGATGCAGCGAAGAGG
AAGATGAGGGAGGACTTGGAGGCTAGGGAGCGCGCGGGGCTGCGGCGATG
GGCGGCGCTGAAGGTTGATCGCTCGAAAGAAGGCGGTACAAATGTGCCGG
AGTTAGAACGAGGTGTCAAGGTGCGCTGGGTACGTGAAGGACGCGGGCTG
GACCTGGATAAAGATCGGTTGATCTCTCTGTTCTCGTCTTACGGCAAGAT
CGAAAATATCCTGCTCCTTAAAGACAAACGACAACGTCTCGGGGATAATC
GCGAGAAAAAGACGGTTGCGACAGGTGTGGTGATATTCGCTTCCATTGTC
AGTGCCCACGCTGCTGTTCTGGATAGTGAGAAGAAGGTGCGTCAGAGTGT
TGGGCAAGCGGATAGCGACTGGTCTGCCGTCGAATCCGTCTTCTGGGCGT
CTGGCAGTCAACCCGACCTGAGCGTTGAATCCAACGGCTATTCTACTGCT
TCCACCCCCTCCGAACAGGGCACCGCAGCACCCAACTCTTCCGGGCCAGT
TCCTTCAGCTGCTCCTCCCAAACCGTCTTTCAACTTTGCTGGGTTGAAGT
CAGCAGCGTCTGATGCCTCCAGCAAGAATCCCGGAAAGGCACCATCTTTC
GGTTCCTTTGCTGCTGGCGCGGCAGCAAAGTCGGCGAAACCTGCGCCTGC
TGGCTCGACCAATGGCTCGAGCGCTCCGAGCATGGCGGAGTTGACGTTGA
TGCGGCTAAGAAATGCGCAACATGCGATATTTCCTTAAATGGCCTCAAAA
GACGACCTCAAGGCTCACGCGGCCTCCAACGAAGACTTCTACGCCCTCCT
CGACATTTCCCCCGCAGCTGCAGAATCAGAAATCCGTCGCGCCTACCGCC
GAACTGCACTGAAATATCACCCCGACAAAATCGCGAACCCCACACCTGCA
GACATCGACAAGTTCCATCTGCTCCAGATTGCCTACGATGTTCTCTCCGA
TCCGTCGGTGCGGCAGCTCTACGATAATGCGCGTGAAGCGCGCCAGCGCA
AGCAGCGCGAGCGGGATATGATGGATGCAGCGAAGAGGAAGATGAGGGAG
GACTTGGAGGCTAGGGAGCGCGCGGGGCTGCGGCGATGGGCGGCGCTGAA
GGTTGATCGCTCGAAAGAAGGCGGTACAAATGTGCCGGAGTTAGAACGAG
GTGTCAAGGTGCGCTGGGTACGTGAAGGACGCGGGCTGGACCTGGATAAA
GATCGGTTGATCTCTCTGTTCTCGTCTTACGGCAAGATCGAAAATATCCT
GCTCCTTAAAGACAAACGACAACGTCTCGGGGATAATCGCGAGAAAAAGA
CGGTTGCGACAGGTGTGGTGATATTCGCTTCCATTGTCAGTGCCCACGCT
GCTGTTCTGGATAGTGAGAAGAAGGTGCGTCAGAGTGTTGGGCAAGCGGA
TAGCGACTGGTCTGCCGTCGAATCCGTCTTCTGGGCGTCTGGCAGTCAAC
CCGACCTGAGCGTTGAATCCAACGGCTATTCTACTGCTTCCACCCCCTCC
GAACAGGGCACCGCAGCACCCAACTCTTCCGGGCCAGTTCCTTCAGCTGC
TCCTCCCAAACCGTCTTTCAACTTTGCTGGGTTGAAGTCAGCAGCGTCTG
ATGCCTCCAGCAAGAATCCCGGAAAGGCACCATCTTTCGGTTCCTTTGCT
GCTGGCGCGGCAGCAAAGTCGGCGAAACCTGCGCCTGCTGGCTCGACCAA
TGGCTCGAGCGCTCCGAGCATGGCGGAGTTGACGTTGATGCGGCTAAGAA
ATGCGCAACATGCGATATTTCCTTAAATGGCCTCAAAAGACGACCTCAAG
GCTCACGCGGCCTCCAACGAAGACTTCTACGCCCTCCTCGACATTTCCCC
CGCAGCTGCAGAATCAGAAATCCGTCGCGCCTACCGCCGAACTGCACTGA
AATATCACCCCGACAAAATCGCGAACCCCACACCTGCAGACATCGACAAG
TTCCATCTGCTCCAGATTGCCTACGATGTTCTCTCCGATCCGTCGGTGCG
GCAGCTCTACGATAATGCGCGTGAAGCGCGCCAGCGCAAGCAGCGCGAGC
GGGATATGATGGATGCAGCGAAGAGGAAGATGAGGGAGGACTTGGAGGCT
AGGGAGCGCGCGGGGCTGCGGCGATGGGCGGCGCTGAAGGTTGATCGCTC
GAAAGAAGGCGGTACAAATGTGCCGGAGTTAGAACGAGGTGTCAAGGTGC
GCTGGGTACGTGAAGGACGCGGGCTGGACCTGGATAAAGATCGGTTGATC
TCTCTGTTCTCGTCTTACGGCAAGATCGAAAATATCCTGCTCCTTAAAGA
CAAACGACAACGTCTCGGGGATAATCGCGAGAAAAAGACGGTTGCGACAG
GTGTGGTGATATTCGCTTCCATTGTCAGTGCCCACGCTGCTGTTCTGGAT
AGTGAGAAGAAGGTGCGTCAGAGTGTTGGGCAAGCGGATAGCGACTGGTC
TGCCGTCGAATCCGTCTTCTGGGCGTCTGGCAGTCAACCCGACCTGAGCG
TTGAATCCAACGGCTATTCTACTGCTTCCACCCCCTCCGAACAGGGCACC
GCAGCACCCAACTCTTCCGGGCCAGTTCCTTCAGCTGCTCCTCCCAAACC
GTCTTTCAACTTTGCTGGGTTGAAGTCAGCAGCGTCTGATGCCTCCAGCA
AGAATCCCGGAAAGGCACCATCTTTCGGTTCCTTTGCTGCTGGCGCGGCA
GCAAAGTCGGCGAAACCTGCGCCTGCTGGCTCGACCAATGGCTCGAGCGC
TCCGAGCATGGCGGAGTTGACGTTGATGCGGCTAAGAAATGCGCAACATG
CGATATTTCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_21480CAN33_21480Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21480-T1.exon1CAN33_21480-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_21480-T1.exon2CAN33_21480-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_21480-T1.exon3CAN33_21480-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21480-T1.cdsCAN33_21480-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21480-T1CAN33_21480-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
ProductDnaJ domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:3326763..3328101 +
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