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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3334499..3335443- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21500-T1 ID=CAN33_21500-T1|Name=CAN33_21500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=945bp|location=Sequence derived from alignment at NKJJ01000011.1:3334499..3335443- (Aspergillus niger FDAARGOS_311)
ATGCCACAGACTGGTCCCTGCAAATTGCTGCTCCCCCTTTCGTACGGCGT
CTCCTCCACTGTGCTATTGCACATGCTGCACCGGCAGTTAGAGGCACTAC
GCTCAAAAAAACATGGTCCCGCGGGCTTCGAAATCCTCGTCCTCGTCGTT
GAGCCTTCGACAATCTCCCCCGTTCCTCCGCACGAAGAAGGCTTTGCACT
CGCGCAGCAGACCTTCCCGCTCTGTTCCTTCACCCGGCTCCCCTTCCACA
GTATCTTCGAGCTTGACCCGGATGTCCATCAAATCATGTCGCAGTATGCC
GGGGAGCACTTCACAGATGACACCTCGCTGTCCGATGAGGAGCGTTTGAA
TCGCTTCCGCAGGTCGATTACAACAGCCACATCCAAGTCCGATGTCGACC
AAATTTTGTTGAACAAACTTGTCGTTGCTTTCGCAAAGAAAATGGAATGC
CGCGGCATAGTATGGGGTGACTCGGATAGCAAGCTCGCTGCAAAGACCCT
CGCCAACGTCGCGAAAGGACGCGGCTCTGCAGTGACGTGGCAGGTGTGCG
ATGGAATGTCGCCTTTTGGCCTAGAATTCAACTTCCCGCTTCGGGACGTG
TTCACGGCAGAGATACGCACCTATGCCACCCTCTTTCCCGAGCTGGCTGG
CATCATCGTTCATGACGAGCCTCCCTCAGAGAATACGCTTACCAAGAATC
TGTCGATCGATGAGCTGATGATCCGTTATGTCAGCACTCAGGGTGAGAAA
TACCCCGGCGTCATGTTGAACGTAACTAGGACTGCCAGTAAGCTCCAGTC
GTCTGGTACATCTATCGGCGGACTGCAGTGCAATTTCTGCGGGGCCTTCA
TGACTACAAATGAGAATATCACGGGCGAACAAGGCAACGAACAGCTTCAA
TTCTGCTATGCCTGTGCTCGGTCCCAACCCGAATTGAGCTGTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3334499..3335443- >CAN33_21500-T1 ID=CAN33_21500-T1|Name=CAN33_21500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=945bp|location=Sequence derived from alignment at NKJJ01000011.1:3334499..3335443- (Aspergillus niger FDAARGOS_311)
ATGCCACAGACTGGTCCCTGCAAATTGCTGCTCCCCCTTTCGTACGGCGT
CTCCTCCACTGTGCTATTGCACATGCTGCACCGGCAGTTAGAGGCACTAC
GCTCAAAAAAACATGGTCCCGCGGGCTTCGAAATCCTCGTCCTCGTCGTT
GAGCCTTCGACAATCTCCCCCGTTCCTCCGCACGAAGAAGGCTTTGCACT
CGCGCAGCAGACCTTCCCGCTCTGTTCCTTCACCCGGCTCCCCTTCCACA
GTATCTTCGAGCTTGACCCGGATGTCCATCAAATCATGTCGCAGTATGCC
GGGGAGCACTTCACAGATGACACCTCGCTGTCCGATGAGGAGCGTTTGAA
TCGCTTCCGCAGGTCGATTACAACAGCCACATCCAAGTCCGATGTCGACC
AAATTTTGTTGAACAAACTTGTCGTTGCTTTCGCAAAGAAAATGGAATGC
CGCGGCATAGTATGGGGTGACTCGGATAGCAAGCTCGCTGCAAAGACCCT
CGCCAACGTCGCGAAAGGACGCGGCTCTGCAGTGACGTGGCAGGTGTGCG
ATGGAATGTCGCCTTTTGGCCTAGAATTCAACTTCCCGCTTCGGGACGTG
TTCACGGCAGAGATACGCACCTATGCCACCCTCTTTCCCGAGCTGGCTGG
CATCATCGTTCATGACGAGCCTCCCTCAGAGAATACGCTTACCAAGAATC
TGTCGATCGATGAGCTGATGATCCGTTATGTCAGCACTCAGGGTGAGAAA
TACCCCGGCGTCATGTTGAACGTAACTAGGACTGCCAGTAAGCTCCAGTC
GTCTGGTACATCTATCGGCGGACTGCAGTGCAATTTCTGCGGGGCCTTCA
TGACTACAAATGAGAATATCACGGGCGAACAAGGCAACGAACAGCTTCAA
TTCTGCTATGCCTGTGCTCGGTCCCAACCCGAATTGAGCTGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000049 | tRNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034227 | tRNA thio-modification |
| GO:0002098 | tRNA wobble uridine modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019407 |
| DBxref | InterPro:IPR014729 |
| Product | cytoplasmic tRNA 2-thiolation protein 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3334499..3335443 - |
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