You are here

Home

CAN33_21550-T1, CAN33_21550-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_21550-T1
Unique NameCAN33_21550-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:3360088..3361352-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_21550-T1 ID=CAN33_21550-T1|Name=CAN33_21550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1265bp|location=Sequence derived from alignment at NKJJ01000011.1:3360088..3361352- (Aspergillus niger FDAARGOS_311)
ATGACTGTATCCGAAACATCAGTTATCCCTCGCGGATCATGGGTCCTGGT
TACGGGAGCGAATAGCTTGGTTGGGTCCAATGTGGCCGATCGGCTGCTTA
GTCGCGGGTATCGTGTGAGGGGAACCGTGCGGAATGCGCAGAGGCACCAA
TGGCTCGGAGATCATTTCCGTCACAAGTATGGAACTGACAGCTTCGAGCT
GGTCCAAATCCAAGACATACAGCGTCCGGGTGCTTTTGACGAAGCGATGA
AAGGTCCGTACACCACTGAATCATCCCCTACGGATATCTCACTGGTCAAA
CGCTAATGCTTAACCGTGCAATTTATAGGCATGTCAGGAGTAGCACATGT
AGTAACCATTTTTGCTGGTCCAAACGATGGTCCAGAGGAGGTATTCAATT
CCATCAAACAATTGGATTACAATATTCTTGCCTCCGCGGCCGCTGAGCCC
AGCGTGAAGCGCTTTGTCTACACCTCCTCCTGCCAAGCGGCTAACACAAT
GAGCCTCGATGATCTGAATGGCAAGACCGTGATCACGTCAGAAACTTGGA
ATGAAACTGCCATACAACGAGCCAAAACGGGGTCTCCTGAGGAATGGAGA
CGGGGATTCGACATATACAGCGCAAGCAAGGCCTTGGGCGAGCAAGGAGT
CTGGGAATGGGTGAAAGAGCACAAGCCTGGGTTCGTGACAAATACCGGTA
TGCACATCTCTCCGTGCACAGGATATTCTTCCAACACACTAAATCATATT
GTCCAGTTCTACCCTCGTTGTGCTACGGTGCCTCTCTCGATCCACAACAC
CAAGGGTTTCCTTCCACACTACTATGGCCAGCAGCTATCATCAAGAATGA
ATGGGCCTCAGTTTCTCAACACGTGAACGCCACTATCCCAGATGGTACGC
ATGAACCATATCCGTATCCCCAACCATTACGAGAATGCCGACTAATTCAC
CCTGAAGGAGGGTACTGTGTGGGCATTGAAGATGTCTCACTTCTACATGT
CGCGGCTTTGGCCAACCCTACCGTCCAAAATGAACGCTTGTTCGCGTATG
GCTGGCCATTCTTCTGGAATGATCTGGCTACCATCTATCGAGGTATATTT
CCTAATCGCGAGCTGCCGACAGATCTGCCTGCCCGGGATAAGGACGCGGA
CTTGTTAGACGTTAGACCTTCGAAGCGGTCGGAAGATCTACTGAAAGAGA
TGGGCAAGCCTGGGTGGAGTAGTCTAAAGGAGATTATTGTGGCTAATGCA
TATGGTCTGGTTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:3360088..3361352-

>CAN33_21550-T1 ID=CAN33_21550-T1|Name=CAN33_21550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4272bp|location=Sequence derived from alignment at NKJJ01000011.1:3360088..3361352- (Aspergillus niger FDAARGOS_311)
GAGGGTACTGTGTGGGCATTGAAGATGTCTCACTTCTACATGTCGCGGCT
TTGGCCAACCCTACCGTCCAAAATGAACGCTTGTTCGCGTATGGCTGGCC
ATTCTTCTGGAATGATCTGGCTACCATCTATCGAGGTATATTTCCTAATC
GCGAGCTGCCGACAGATCTGCCTGCCCGGGATAAGGACGCGGACTTGTTA
GACGTTAGACCTTCGAAGCGGTCGGAAGATCTACTGAAAGAGATGGGCAA
GCCTGGGTGGAGTAGTCTAAAGGAGATTATTGTGGCTAATGCATATGGTC
TGGTTTGATTCTACCCTCGTTGTGCTACGGTGCCTCTCTCGATCCACAAC
ACCAAGGGTTTCCTTCCACACTACTATGGCCAGCAGCTATCATCAAGAAT
GAATGGGCCTCAGTTTCTCAACACGTGAACGCCACTATCCCAGATGGCAT
GTCAGGAGTAGCACATGTAGTAACCATTTTTGCTGGTCCAAACGATGGTC
CAGAGGAGGTATTCAATTCCATCAAACAATTGGATTACAATATTCTTGCC
TCCGCGGCCGCTGAGCCCAGCGTGAAGCGCTTTGTCTACACCTCCTCCTG
CCAAGCGGCTAACACAATGAGCCTCGATGATCTGAATGGCAAGACCGTGA
TCACGTCAGAAACTTGGAATGAAACTGCCATACAACGAGCCAAAACGGGG
TCTCCTGAGGAATGGAGACGGGGATTCGACATATACAGCGCAAGCAAGGC
CTTGGGCGAGCAAGGAGTCTGGGAATGGGTGAAAGAGCACAAGCCTGGGT
TCGTGACAAATACCGATGACTGTATCCGAAACATCAGTTATCCCTCGCGG
ATCATGGGTCCTGGTTACGGGAGCGAATAGCTTGGTTGGGTCCAATGTGG
CCGATCGGCTGCTTAGTCGCGGGTATCGTGTGAGGGGAACCGTGCGGAAT
GCGCAGAGGCACCAATGGCTCGGAGATCATTTCCGTCACAAGTATGGAAC
TGACAGCTTCGAGCTGGTCCAAATCCAAGACATACAGCGTCCGGGTGCTT
TTGACGAAGCGATGAAAGGAGGGTACTGTGTGGGCATTGAAGATGTCTCA
CTTCTACATGTCGCGGCTTTGGCCAACCCTACCGTCCAAAATGAACGCTT
GTTCGCGTATGGCTGGCCATTCTTCTGGAATGATCTGGCTACCATCTATC
GAGGTATATTTCCTAATCGCGAGCTGCCGACAGATCTGCCTGCCCGGGAT
AAGGACGCGGACTTGTTAGACGTTAGACCTTCGAAGCGGTCGGAAGATCT
ACTGAAAGAGATGGGCAAGCCTGGGTGGAGTAGTCTAAAGGAGATTATTG
TGGCTAATGCATATGGTCTGGTTTGATTCTACCCTCGTTGTGCTACGGTG
CCTCTCTCGATCCACAACACCAAGGGTTTCCTTCCACACTACTATGGCCA
GCAGCTATCATCAAGAATGAATGGGCCTCAGTTTCTCAACACGTGAACGC
CACTATCCCAGATGGCATGTCAGGAGTAGCACATGTAGTAACCATTTTTG
CTGGTCCAAACGATGGTCCAGAGGAGGTATTCAATTCCATCAAACAATTG
GATTACAATATTCTTGCCTCCGCGGCCGCTGAGCCCAGCGTGAAGCGCTT
TGTCTACACCTCCTCCTGCCAAGCGGCTAACACAATGAGCCTCGATGATC
TGAATGGCAAGACCGTGATCACGTCAGAAACTTGGAATGAAACTGCCATA
CAACGAGCCAAAACGGGGTCTCCTGAGGAATGGAGACGGGGATTCGACAT
ATACAGCGCAAGCAAGGCCTTGGGCGAGCAAGGAGTCTGGGAATGGGTGA
AAGAGCACAAGCCTGGGTTCGTGACAAATACCGATGACTGTATCCGAAAC
ATCAGTTATCCCTCGCGGATCATGGGTCCTGGTTACGGGAGCGAATAGCT
TGGTTGGGTCCAATGTGGCCGATCGGCTGCTTAGTCGCGGGTATCGTGTG
AGGGGAACCGTGCGGAATGCGCAGAGGCACCAATGGCTCGGAGATCATTT
CCGTCACAAGTATGGAACTGACAGCTTCGAGCTGGTCCAAATCCAAGACA
TACAGCGTCCGGGTGCTTTTGACGAAGCGATGAAAGGAGGGTACTGTGTG
GGCATTGAAGATGTCTCACTTCTACATGTCGCGGCTTTGGCCAACCCTAC
CGTCCAAAATGAACGCTTGTTCGCGTATGGCTGGCCATTCTTCTGGAATG
ATCTGGCTACCATCTATCGAGGTATATTTCCTAATCGCGAGCTGCCGACA
GATCTGCCTGCCCGGGATAAGGACGCGGACTTGTTAGACGTTAGACCTTC
GAAGCGGTCGGAAGATCTACTGAAAGAGATGGGCAAGCCTGGGTGGAGTA
GTCTAAAGGAGATTATTGTGGCTAATGCATATGGTCTGGTTTGATTCTAC
CCTCGTTGTGCTACGGTGCCTCTCTCGATCCACAACACCAAGGGTTTCCT
TCCACACTACTATGGCCAGCAGCTATCATCAAGAATGAATGGGCCTCAGT
TTCTCAACACGTGAACGCCACTATCCCAGATGGCATGTCAGGAGTAGCAC
ATGTAGTAACCATTTTTGCTGGTCCAAACGATGGTCCAGAGGAGGTATTC
AATTCCATCAAACAATTGGATTACAATATTCTTGCCTCCGCGGCCGCTGA
GCCCAGCGTGAAGCGCTTTGTCTACACCTCCTCCTGCCAAGCGGCTAACA
CAATGAGCCTCGATGATCTGAATGGCAAGACCGTGATCACGTCAGAAACT
TGGAATGAAACTGCCATACAACGAGCCAAAACGGGGTCTCCTGAGGAATG
GAGACGGGGATTCGACATATACAGCGCAAGCAAGGCCTTGGGCGAGCAAG
GAGTCTGGGAATGGGTGAAAGAGCACAAGCCTGGGTTCGTGACAAATACC
GATGACTGTATCCGAAACATCAGTTATCCCTCGCGGATCATGGGTCCTGG
TTACGGGAGCGAATAGCTTGGTTGGGTCCAATGTGGCCGATCGGCTGCTT
AGTCGCGGGTATCGTGTGAGGGGAACCGTGCGGAATGCGCAGAGGCACCA
ATGGCTCGGAGATCATTTCCGTCACAAGTATGGAACTGACAGCTTCGAGC
TGGTCCAAATCCAAGACATACAGCGTCCGGGTGCTTTTGACGAAGCGATG
AAAGGAGGGTACTGTGTGGGCATTGAAGATGTCTCACTTCTACATGTCGC
GGCTTTGGCCAACCCTACCGTCCAAAATGAACGCTTGTTCGCGTATGGCT
GGCCATTCTTCTGGAATGATCTGGCTACCATCTATCGAGGTATATTTCCT
AATCGCGAGCTGCCGACAGATCTGCCTGCCCGGGATAAGGACGCGGACTT
GTTAGACGTTAGACCTTCGAAGCGGTCGGAAGATCTACTGAAAGAGATGG
GCAAGCCTGGGTGGAGTAGTCTAAAGGAGATTATTGTGGCTAATGCATAT
GGTCTGGTTTGATTCTACCCTCGTTGTGCTACGGTGCCTCTCTCGATCCA
CAACACCAAGGGTTTCCTTCCACACTACTATGGCCAGCAGCTATCATCAA
GAATGAATGGGCCTCAGTTTCTCAACACGTGAACGCCACTATCCCAGATG
GCATGTCAGGAGTAGCACATGTAGTAACCATTTTTGCTGGTCCAAACGAT
GGTCCAGAGGAGGTATTCAATTCCATCAAACAATTGGATTACAATATTCT
TGCCTCCGCGGCCGCTGAGCCCAGCGTGAAGCGCTTTGTCTACACCTCCT
CCTGCCAAGCGGCTAACACAATGAGCCTCGATGATCTGAATGGCAAGACC
GTGATCACGTCAGAAACTTGGAATGAAACTGCCATACAACGAGCCAAAAC
GGGGTCTCCTGAGGAATGGAGACGGGGATTCGACATATACAGCGCAAGCA
AGGCCTTGGGCGAGCAAGGAGTCTGGGAATGGGTGAAAGAGCACAAGCCT
GGGTTCGTGACAAATACCGATGACTGTATCCGAAACATCAGTTATCCCTC
GCGGATCATGGGTCCTGGTTACGGGAGCGAATAGCTTGGTTGGGTCCAAT
GTGGCCGATCGGCTGCTTAGTCGCGGGTATCGTGTGAGGGGAACCGTGCG
GAATGCGCAGAGGCACCAATGGCTCGGAGATCATTTCCGTCACAAGTATG
GAACTGACAGCTTCGAGCTGGTCCAAATCCAAGACATACAGCGTCCGGGT
GCTTTTGACGAAGCGATGAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662obsolete coenzyme binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_21550CAN33_21550Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21550-T1CAN33_21550-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21550-T1.cdsCAN33_21550-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21550-T1.exon4CAN33_21550-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_21550-T1.exon3CAN33_21550-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_21550-T1.exon2CAN33_21550-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_21550-T1.exon1CAN33_21550-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001509
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
ProductNAD dependent epimerase/dehydratase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:3360088..3361352 -
Powered by Drupal