|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3381926..3383416+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21605-T1 ID=CAN33_21605-T1|Name=CAN33_21605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1491bp|location=Sequence derived from alignment at NKJJ01000011.1:3381926..3383416+ (Aspergillus niger FDAARGOS_311)
ATGAACGATCAGCTGCCCATGCAGATTCGCTCGCGGAGGTCACACAATAA
GTCCCGCGCAGGATGTCAGAATTGTAAGAAACGCCGTGTCAAGGTAGGCC
TCCAAGCTGCATCTGCCCGGTGGAAATCGGATGAACGCTTTCAACCCTCT
GCAGTACTATATATACTACTTCTCTTCTACTAGTACTATATGGACTATAG
AGCATTTTCCACCACAATGTTGTCTATTTTTCGTGCTTTGGCTTGCTTTA
TCCCCAAATCTGCCACATATGCACCCCTCTCCGGTCATACTGACTCTCCC
CAGTGTGATGAGAAAAAGCCACAATGCACCAAATGTGTGCGACATTCGAT
CGAATGTGATTTTGCTTCCCCGGCCTCGTCGACCTCCCCAGATCCAACCC
GCCGATTCCGGTTTCGACCATCCAAATATCAACCCGGTTCACGAACATCA
CCTCCAAGCACTCATACAGAAGCTGTAAGCAGCTCAGCTGCATCCGCATC
TACCGGAGTGCAATGTGATCTCGCCGGCAGTGGCCTTTCCGGCGGCATCT
CCTTTGCCGATCTGAAGCTCTACCACCATTTTGTGACCTCGACCTACAAA
ACCTTGACAGACGAGAAAATGGACCACAAACGCGTCTGGTCACATCATGT
TCCGCAATGGGGTATCTCGTTCCCCTCCATCATGCATCTAATCCTGGCGC
TGTCGGCGCTGCATCTGGCGCATGGGGATCCCGCCTCGCGCACGCAGTTC
ATCGCTCAAGCGGACGATCACTTCACCTTTGGCGTCCGATCGGTGTCTGC
TGTTCTGTGTCTGCTCAACATGGAAAACTGTCAGCTGATCTACATGTCTG
CAGCATTGATTTGCCTGGTGTATTTCGGTCGTGGACCCCGTCATGGCGAG
TATCTGGTGTTCAGTGACACCGGTCAGTCCGAGTGGCTCGTTCTGTTGCA
TGGTGTGCATTCTATCATCTCGCAAAATCATGATCGTGTCTTCACCGGAG
TTCTAGAGCCGATACCGGACAATAGTATCGGTGGGGTGAGTGCCGAGTTG
CAGGCAGAACTGGACGAGCATCTGCAGCAGGTTCGACAAGTCCAGGCGTT
TATTCTGTCCAATGTTACCGATGAAGGGTCCCGAGCTATGTTTGAAGCTA
CCCTAAATGACCTGCGCTCGGCGTTCGAGGAAATATATAAGATGCGCAGC
GCTGGGAAGGATGGCATCTGTCTGATGCATCTGGTGATAGGGTGGGTGTA
CCGTCTACGGGAGGAGATGATTTCCCTGTTGGAGCAGAAGGACCGATACG
CATTGGTTGTCTTTGGGCATTGGAGCATCTTACTGGTGTATATGCGGTCA
TCGTGGCTGATGCAGGGATGGGATGCGCATGTGCTACATGGGGTGCGCAC
GTCCTTGGGAGAGGAAGACCAGCACTGGCTTGCGTGGCCGATCCAGGTGA
TTGAAGGGGGAGCATCTACACTTACTACTTCTCTACTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3381926..3383416+ >CAN33_21605-T1 ID=CAN33_21605-T1|Name=CAN33_21605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2562bp|location=Sequence derived from alignment at NKJJ01000011.1:3381926..3383416+ (Aspergillus niger FDAARGOS_311)
ATGAACGATCAGCTGCCCATGCAGATTCGCTCGCGGAGGTCACACAATAA
GTCCCGCGCAGGATGTCAGAATTGTAAGAAACGCCGTGTCAAGTGTGATG
AGAAAAAGCCACAATGCACCAAATGTGTGCGACATTCGATCGAATGTGAT
TTTGCTTCCCCGGCCTCGTCGACCTCCCCAGATCCAACCCGCCGATTCCG
GTTTCGACCATCCAAATATCAACCCGGTTCACGAACATCACCTCCAAGCA
CTCATACAGAAGCTGTAAGCAGCTCAGCTGCATCCGCATCTACCGGAGTG
CAATGTGATCTCGCCGGCAGTGGCCTTTCCGGCGGCATCTCCTTTGCCGA
TCTGAAGCTCTACCACCATTTTGTGACCTCGACCTACAAAACCTTGACAG
ACGAGAAAATGGACCACAAACGCGTCTGGTCACATCATGTTCCGCAATGG
GGTATCTCGTTCCCCTCCATCATGCATCTAATCCTGGCGCTGTCGGCGCT
GCATCTGGCGCATGGGGATCCCGCCTCGCGCACGCAGTTCATCGCTCAAG
CGGACGATCACTTCACCTTTGGCGTCCGATCGGTGTCTGCTGTTCTGTGT
CTGCTCAACATGGAAAACTGTCAGCTGATCTACATGTCTGCAGCATTGAT
TTGCCTGGTGTATTTCGGTCGTGGACCCCGTCATGGCGAGTATCTGGTGT
TCAGTGACACCGGTCAGTCCGAGTGGCTCGTTCTGTTGCATGGTGTGCAT
TCTATCATCTCGCAAAATCATGATCGTGTCTTCACCGGAGTTCTAGAGCC
GATACCGGACAATAGTATCGGTGGGGTGAGTGCCGAGTTGCAGGCAGAAC
TGGACGAGCATCTGCAGCAGGTTCGACAAGTCCAGGCGTTTATTCTGTCC
AATGTTACCGATGAAGGGTCCCGAGCTATGTTTGAAGCTACCCTAAATGA
CCTGCGCTCGGCGTTCGAGGAAATATATAAGATGCGCAGCGCTGGGAAGG
ATGGCATCTGTCTGATGCATCTGGTGATAGGGTGGGTGTACCGTCTACGG
GAGGAGATGATTTCCCTGTTGGAGCAGAAGGACCGATACGCATTGGTTGT
CTTTGGGCATTGGAGCATCTTACTGGTGTATATGCGGTCATCGTGGCTGA
TGCAGGGATGGGATGCGCATGTGCTACATGGGGTGCGCACGTCCTTGGGA
GAGGAAGACCAGCACTGGCTTGCGTGGCCGATCCAGGTGATTGAAGGGGG
AGCATCTACACTTACTACTTCTCTACTGTGAATGAACGATCAGCTGCCCA
TGCAGATTCGCTCGCGGAGGTCACACAATAAGTCCCGCGCAGGATGTCAG
AATTGTAAGAAACGCCGTGTCAAGTGTGATGAGAAAAAGCCACAATGCAC
CAAATGTGTGCGACATTCGATCGAATGTGATTTTGCTTCCCCGGCCTCGT
CGACCTCCCCAGATCCAACCCGCCGATTCCGGTTTCGACCATCCAAATAT
CAACCCGGTTCACGAACATCACCTCCAAGCACTCATACAGAAGCTGTAAG
CAGCTCAGCTGCATCCGCATCTACCGGAGTGCAATGTGATCTCGCCGGCA
GTGGCCTTTCCGGCGGCATCTCCTTTGCCGATCTGAAGCTCTACCACCAT
TTTGTGACCTCGACCTACAAAACCTTGACAGACGAGAAAATGGACCACAA
ACGCGTCTGGTCACATCATGTTCCGCAATGGGGTATCTCGTTCCCCTCCA
TCATGCATCTAATCCTGGCGCTGTCGGCGCTGCATCTGGCGCATGGGGAT
CCCGCCTCGCGCACGCAGTTCATCGCTCAAGCGGACGATCACTTCACCTT
TGGCGTCCGATCGGTGTCTGCTGTTCTGTGTCTGCTCAACATGGAAAACT
GTCAGCTGATCTACATGTCTGCAGCATTGATTTGCCTGGTGTATTTCGGT
CGTGGACCCCGTCATGGCGAGTATCTGGTGTTCAGTGACACCGGTCAGTC
CGAGTGGCTCGTTCTGTTGCATGGTGTGCATTCTATCATCTCGCAAAATC
ATGATCGTGTCTTCACCGGAGTTCTAGAGCCGATACCGGACAATAGTATC
GGTGGGGTGAGTGCCGAGTTGCAGGCAGAACTGGACGAGCATCTGCAGCA
GGTTCGACAAGTCCAGGCGTTTATTCTGTCCAATGTTACCGATGAAGGGT
CCCGAGCTATGTTTGAAGCTACCCTAAATGACCTGCGCTCGGCGTTCGAG
GAAATATATAAGATGCGCAGCGCTGGGAAGGATGGCATCTGTCTGATGCA
TCTGGTGATAGGGTGGGTGTACCGTCTACGGGAGGAGATGATTTCCCTGT
TGGAGCAGAAGGACCGATACGCATTGGTTGTCTTTGGGCATTGGAGCATC
TTACTGGTGTATATGCGGTCATCGTGGCTGATGCAGGGATGGGATGCGCA
TGTGCTACATGGGGTGCGCACGTCCTTGGGAGAGGAAGACCAGCACTGGC
TTGCGTGGCCGATCCAGGTGATTGAAGGGGGAGCATCTACACTTACTACT
TCTCTACTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3381926..3383416 + |
|
