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CAN33_21655-T1, CAN33_21655-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_21655-T1
Unique NameCAN33_21655-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:3408343..3410022+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_21655-T1 ID=CAN33_21655-T1|Name=CAN33_21655-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1680bp|location=Sequence derived from alignment at NKJJ01000011.1:3408343..3410022+ (Aspergillus niger FDAARGOS_311)
ATGGTTCACATTCAAGACCTCCCTCGGGAGCTGCTTCTGCATATTTTCTC
CTCTGTTGCCCACAGCGATCCTTCCAACCCACTGGATCAGAACACCAAGT
CTTCCGATGAAAACGTCAAGACTCAAACCCAACAACCTCCTGCCGATAGA
CTGTTCCCACGCCCTCCTTGGGTCGCTGAGGATAAAGATGATGAGACCGA
TGAGGAGAATCCCGAGGATGATTGGGAGGGAGGGAGCACATAGATCTAGG
ACGTGATCGACGTGTACAATCTGTGTCGGGTGTGCCGCTTATTCCGCGAC
CTCGCCCAGCCCCTGCTGTTCGAGCATGTTGATCTGTCTGGCTTCCCTGG
TGACATGCGGAACCTCGTTCTTCTTACCCGCACCGTCCTTTGCCGTCCCA
GCCTAGGCGAACATATCCGCAGCCTCTCCGTCCTTCCAGACCACGATCAT
CACGTCTTTGGTAAAAGCCCAAAGCCCCTGACCGCCGACGACCGAAAGCT
CTTTAGCTCCTCCATACGCGATATCGGCTTAGCCAAGGAGGACGAGCGCG
ACTGGATGAGTGCTTTGAAGAAGGAGGAACTTGACTACAGTCTTATGGTC
CTCTTGCTCATCTTGAAAGCTCCAAATCTCCGCTTGTTGACAGTGGCGGG
AGGTTACTTTGCCATGAAGCCACTCGAACAACTCTGGAAGCGCCATCCCG
CCGTATTGTCAAAACTCGAGGACCTGTGGTTTGAGGGTGACGATCTCCTC
AAGGGCTATCCGCTTACTATTTACGAGGAGATGATCAGTCGGCCTCAGCT
ACGCTCGTTAAATATTGAAGAAGCCCACCTCAGTGACGACCTATTTCCCG
CCTGTTGGACTCCACAATCGTTAACCACGAGCCGGATCAGCCTACGCCTC
TGCCACATCGATGCCCCCTCTGTCACCAAGTTACTTCGCGCATGCCGCAC
AGTGACTCACTTCATCTACGACAACTTTACCATCGACCCTGAGGACCAGC
CTCATAACCTCCGCCCCGTTCGCGAAGCCACCGCTCCCGAGTTATGCGCC
GCGCTCCTCCCCCACAAGGACACCCTAGAATGCCTGACAGTGACCTTCAA
CCGCGAACCCCAGGGACGAGAGAACATCGATGATTACGTGGCCCGCCAGG
CGAAGATCGGCCCGCTGCGCGACTTCTCCGTGCTCCGGCGACTCACCGTT
CAGCAAGCGTTCCTGCCGCTGCAGCCCCAGTTCCCTCCCACCCTCGAACA
GCTCACTGTCGACGACTGCAACGTCTCCGTCCGTGGGTTGGCCGAGCATC
TGGCTAAGGAACATCGACAGGGACGCCTTCCCGCACTCAAGCGCGTCGAA
ATGCTCGCCGTGGATATTACCGACCCCATCAAACTTCCGGGTCAGCAGAT
CCCATTTGGCCAGACGCCGGAGCAGTCTTACACAAGCATTAAGGATCTGT
TCAAGGACACGTCCGTCGATTTCACCATCACTCCTTATCCGGATTGTCCG
CAGAACCTCGCGGGCGACTCCGACCTCGACGACTACTCTGATGATGACCC
TTACGATATGACAGATGAATATGGCTTACTGGGTCTCCGCGAAGGGGGTA
ACAGCCTCTTCCAGGCGATGCTCATGCAAGCGATGCGGGCACAGGAGGAC
CATTACATGGATGATGAGTTCGACGAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:3408343..3410022+

>CAN33_21655-T1 ID=CAN33_21655-T1|Name=CAN33_21655-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3204bp|location=Sequence derived from alignment at NKJJ01000011.1:3408343..3410022+ (Aspergillus niger FDAARGOS_311)
ATGGTTCACATTCAAGACCTCCCTCGGGAGCTGCTTCTGCATATTTTCTC
CTCTGTTGCCCACAGCGATCCTTCCAACCCACTGGATCAGAACACCAAGT
CTTCCGATGAAAACGTCAAGACTCAAACCCAACAACCTCCTGCCGATAGA
CTGTTCCCACGCCCTCCTTGGGACGTGATCGACGTGTACAATCTGTGTCG
GGTGTGCCGCTTATTCCGCGACCTCGCCCAGCCCCTGCTGTTCGAGCATG
TTGATCTGTCTGGCTTCCCTGGTGACATGCGGAACCTCGTTCTTCTTACC
CGCACCGTCCTTTGCCGTCCCAGCCTAGGCGAACATATCCGCAGCCTCTC
CGTCCTTCCAGACCACGATCATCACGTCTTTGGTAAAAGCCCAAAGCCCC
TGACCGCCGACGACCGAAAGCTCTTTAGCTCCTCCATACGCGATATCGGC
TTAGCCAAGGAGGACGAGCGCGACTGGATGAGTGCTTTGAAGAAGGAGGA
ACTTGACTACAGTCTTATGGTCCTCTTGCTCATCTTGAAAGCTCCAAATC
TCCGCTTGTTGACAGTGGCGGGAGGTTACTTTGCCATGAAGCCACTCGAA
CAACTCTGGAAGCGCCATCCCGCCGTATTGTCAAAACTCGAGGACCTGTG
GTTTGAGGGTGACGATCTCCTCAAGGGCTATCCGCTTACTATTTACGAGG
AGATGATCAGTCGGCCTCAGCTACGCTCGTTAAATATTGAAGAAGCCCAC
CTCAGTGACGACCTATTTCCCGCCTGTTGGACTCCACAATCGTTAACCAC
GAGCCGGATCAGCCTACGCCTCTGCCACATCGATGCCCCCTCTGTCACCA
AGTTACTTCGCGCATGCCGCACAGTGACTCACTTCATCTACGACAACTTT
ACCATCGACCCTGAGGACCAGCCTCATAACCTCCGCCCCGTTCGCGAAGC
CACCGCTCCCGAGTTATGCGCCGCGCTCCTCCCCCACAAGGACACCCTAG
AATGCCTGACAGTGACCTTCAACCGCGAACCCCAGGGACGAGAGAACATC
GATGATTACGTGGCCCGCCAGGCGAAGATCGGCCCGCTGCGCGACTTCTC
CGTGCTCCGGCGACTCACCGTTCAGCAAGCGTTCCTGCCGCTGCAGCCCC
AGTTCCCTCCCACCCTCGAACAGCTCACTGTCGACGACTGCAACGTCTCC
GTCCGTGGGTTGGCCGAGCATCTGGCTAAGGAACATCGACAGGGACGCCT
TCCCGCACTCAAGCGCGTCGAAATGCTCGCCGTGGATATTACCGACCCCA
TCAAACTTCCGGGTCAGCAGATCCCATTTGGCCAGACGCCGGAGCAGTCT
TACACAAGCATTAAGGATCTGTTCAAGGACACGTCCGTCGATTTCACCAT
CACTCCTTATCCGGATTGTCCGCAGAACCTCGCGGGCGACTCCGACCTCG
ACGACTACTCTGATGATGACCCTTACGATATGACAGATGAATATGGCTTA
CTGGGTCTCCGCGAAGGGGGTAACAGCCTCTTCCAGGCGATGCTCATGCA
AGCGATGCGGGCACAGGAGGACCATTACATGGATGATGAGTTCGACGAGT
GAATGGTTCACATTCAAGACCTCCCTCGGGAGCTGCTTCTGCATATTTTC
TCCTCTGTTGCCCACAGCGATCCTTCCAACCCACTGGATCAGAACACCAA
GTCTTCCGATGAAAACGTCAAGACTCAAACCCAACAACCTCCTGCCGATA
GACTGTTCCCACGCCCTCCTTGGGACGTGATCGACGTGTACAATCTGTGT
CGGGTGTGCCGCTTATTCCGCGACCTCGCCCAGCCCCTGCTGTTCGAGCA
TGTTGATCTGTCTGGCTTCCCTGGTGACATGCGGAACCTCGTTCTTCTTA
CCCGCACCGTCCTTTGCCGTCCCAGCCTAGGCGAACATATCCGCAGCCTC
TCCGTCCTTCCAGACCACGATCATCACGTCTTTGGTAAAAGCCCAAAGCC
CCTGACCGCCGACGACCGAAAGCTCTTTAGCTCCTCCATACGCGATATCG
GCTTAGCCAAGGAGGACGAGCGCGACTGGATGAGTGCTTTGAAGAAGGAG
GAACTTGACTACAGTCTTATGGTCCTCTTGCTCATCTTGAAAGCTCCAAA
TCTCCGCTTGTTGACAGTGGCGGGAGGTTACTTTGCCATGAAGCCACTCG
AACAACTCTGGAAGCGCCATCCCGCCGTATTGTCAAAACTCGAGGACCTG
TGGTTTGAGGGTGACGATCTCCTCAAGGGCTATCCGCTTACTATTTACGA
GGAGATGATCAGTCGGCCTCAGCTACGCTCGTTAAATATTGAAGAAGCCC
ACCTCAGTGACGACCTATTTCCCGCCTGTTGGACTCCACAATCGTTAACC
ACGAGCCGGATCAGCCTACGCCTCTGCCACATCGATGCCCCCTCTGTCAC
CAAGTTACTTCGCGCATGCCGCACAGTGACTCACTTCATCTACGACAACT
TTACCATCGACCCTGAGGACCAGCCTCATAACCTCCGCCCCGTTCGCGAA
GCCACCGCTCCCGAGTTATGCGCCGCGCTCCTCCCCCACAAGGACACCCT
AGAATGCCTGACAGTGACCTTCAACCGCGAACCCCAGGGACGAGAGAACA
TCGATGATTACGTGGCCCGCCAGGCGAAGATCGGCCCGCTGCGCGACTTC
TCCGTGCTCCGGCGACTCACCGTTCAGCAAGCGTTCCTGCCGCTGCAGCC
CCAGTTCCCTCCCACCCTCGAACAGCTCACTGTCGACGACTGCAACGTCT
CCGTCCGTGGGTTGGCCGAGCATCTGGCTAAGGAACATCGACAGGGACGC
CTTCCCGCACTCAAGCGCGTCGAAATGCTCGCCGTGGATATTACCGACCC
CATCAAACTTCCGGGTCAGCAGATCCCATTTGGCCAGACGCCGGAGCAGT
CTTACACAAGCATTAAGGATCTGTTCAAGGACACGTCCGTCGATTTCACC
ATCACTCCTTATCCGGATTGTCCGCAGAACCTCGCGGGCGACTCCGACCT
CGACGACTACTCTGATGATGACCCTTACGATATGACAGATGAATATGGCT
TACTGGGTCTCCGCGAAGGGGGTAACAGCCTCTTCCAGGCGATGCTCATG
CAAGCGATGCGGGCACAGGAGGACCATTACATGGATGATGAGTTCGACGA
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_21655CAN33_21655Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21655-T1.exon1CAN33_21655-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_21655-T1.exon2CAN33_21655-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21655-T1.cdsCAN33_21655-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21655-T1CAN33_21655-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
ProductF-box-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:3408343..3410022 +
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