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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3427302..3428253- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21695-T1 ID=CAN33_21695-T1|Name=CAN33_21695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=952bp|location=Sequence derived from alignment at NKJJ01000011.1:3427302..3428253- (Aspergillus niger FDAARGOS_311)
ATGTCACTCCCATTTCAGGTGGTGGAGGAGGCTAATCAGCCCTTTCTGAA
GAGCTGCCGTCACGGTGACTTGGCCCAAGTCAAGGAACATCAGAAGGCCA
AGGCTCTAGACCAAGAGGTTCTGACCTTGGGCTTGAGGGAAGCTGCCCAG
GGCGATCATGTCGAAATTATGCGCTATCTACTGAATGCAGGCGCCAAACC
CCAGTCTCCCACCGTCGTGGATGAAGTACACTCGGCTGAGGCAGTCAAGG
CTTTGCTAGACAACGGTCTTACTTTTGAGACTCAGCTACACCCTCTAGGT
ACAGTGCCTCTTGTGTGGGTATCCCTTTGCTTGCCTGTTGTTGATCACAC
GGACTAACCAGAGAAACAGACACATTGTAAAGAAGAACGACCAACGGCTC
GTTCACTGGTGCCTGGAACAAGGCGCCGACCCCACCTTCGGCTGCCCGAA
TGTCCTGTCATTCAATGACCTTGAGAAGCCTGATCAGTCTCCTACGAAGG
GCTCAGGGGCAGTCCTTGGCATGGCATCCCGTCGAAGTAGCCCAGAGATT
GTTGACCTCCTTCTTGATCATGGAGCCAACATCCACAACAGTAATGTCCT
ACATTATGCTGCATGTAGGAGAGGCGGACTGGCCATTCCAATGATGGAGC
ACCTGATACAGCGTGGGGCCGACGTGAATGAATTCGGTTATCCTGCATTC
CTACATTTCGGTGGCACTCCCCTTCATGCGGCCAGCTACCAAGGCAATCT
CCTGGCCGTGAAGTGGCTCCTGGAGCATGGCGCAAACCCCGGCGTGGAAG
ATGCGCAAAGTAGTAAGCCGCTTGATCTAGCAGCTCTGGAGGAGGAATAC
GAAATATGTGATTTTCTCTATGAATGGTCGCCATTGGACGACTTTGGCAA
GGGTGAGAATGGTCGCTCAGGCCAGCCGAAAGCGAACAGCTCCAGAGCAT
GA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3427302..3428253- >CAN33_21695-T1 ID=CAN33_21695-T1|Name=CAN33_21695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1794bp|location=Sequence derived from alignment at NKJJ01000011.1:3427302..3428253- (Aspergillus niger FDAARGOS_311)
ACACATTGTAAAGAAGAACGACCAACGGCTCGTTCACTGGTGCCTGGAAC
AAGGCGCCGACCCCACCTTCGGCTGCCCGAATGTCCTGTCATTCAATGAC
CTTGAGAAGCCTGATCAGTCTCCTACGAAGGGCTCAGGGGCAGTCCTTGG
CATGGCATCCCGTCGAAGTAGCCCAGAGATTGTTGACCTCCTTCTTGATC
ATGGAGCCAACATCCACAACAGTAATGTCCTACATTATGCTGCATGTAGG
AGAGGCGGACTGGCCATTCCAATGATGGAGCACCTGATACAGCGTGGGGC
CGACGTGAATGAATTCGGTTATCCTGCATTCCTACATTTCGGTGGCACTC
CCCTTCATGCGGCCAGCTACCAAGGCAATCTCCTGGCCGTGAAGTGGCTC
CTGGAGCATGGCGCAAACCCCGGCGTGGAAGATGCGCAAAGTAGTAAGCC
GCTTGATCTAGCAGCTCTGGAGGAGGAATACGAAATATGTGATTTTCTCT
ATGAATGGTCGCCATTGGACGACTTTGGCAAGGGTGAGAATGGTCGCTCA
GGCCAGCCGAAAGCGAACAGCTCCAGAGCATGAATGTCACTCCCATTTCA
GGTGGTGGAGGAGGCTAATCAGCCCTTTCTGAAGAGCTGCCGTCACGGTG
ACTTGGCCCAAGTCAAGGAACATCAGAAGGCCAAGGCTCTAGACCAAGAG
GTTCTGACCTTGGGCTTGAGGGAAGCTGCCCAGGGCGATCATGTCGAAAT
TATGCGCTATCTACTGAATGCAGGCGCCAAACCCCAGTCTCCCACCGTCG
TGGATGAAGTACACTCGGCTGAGGCAGTCAAGGCTTTGCTAGACAACGGT
CTTACTTTTGAGACTCAGCTACACCCTCTAGGTACAGTGCCTCTTGTACA
CATTGTAAAGAAGAACGACCAACGGCTCGTTCACTGGTGCCTGGAACAAG
GCGCCGACCCCACCTTCGGCTGCCCGAATGTCCTGTCATTCAATGACCTT
GAGAAGCCTGATCAGTCTCCTACGAAGGGCTCAGGGGCAGTCCTTGGCAT
GGCATCCCGTCGAAGTAGCCCAGAGATTGTTGACCTCCTTCTTGATCATG
GAGCCAACATCCACAACAGTAATGTCCTACATTATGCTGCATGTAGGAGA
GGCGGACTGGCCATTCCAATGATGGAGCACCTGATACAGCGTGGGGCCGA
CGTGAATGAATTCGGTTATCCTGCATTCCTACATTTCGGTGGCACTCCCC
TTCATGCGGCCAGCTACCAAGGCAATCTCCTGGCCGTGAAGTGGCTCCTG
GAGCATGGCGCAAACCCCGGCGTGGAAGATGCGCAAAGTAGTAAGCCGCT
TGATCTAGCAGCTCTGGAGGAGGAATACGAAATATGTGATTTTCTCTATG
AATGGTCGCCATTGGACGACTTTGGCAAGGGTGAGAATGGTCGCTCAGGC
CAGCCGAAAGCGAACAGCTCCAGAGCATGAATGTCACTCCCATTTCAGGT
GGTGGAGGAGGCTAATCAGCCCTTTCTGAAGAGCTGCCGTCACGGTGACT
TGGCCCAAGTCAAGGAACATCAGAAGGCCAAGGCTCTAGACCAAGAGGTT
CTGACCTTGGGCTTGAGGGAAGCTGCCCAGGGCGATCATGTCGAAATTAT
GCGCTATCTACTGAATGCAGGCGCCAAACCCCAGTCTCCCACCGTCGTGG
ATGAAGTACACTCGGCTGAGGCAGTCAAGGCTTTGCTAGACAACGGTCTT
ACTTTTGAGACTCAGCTACACCCTCTAGGTACAGTGCCTCTTGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3427302..3428253 - |
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