You are here

Home

CAN33_21825-T1, CAN33_21825-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_21825-T1
Unique NameCAN33_21825-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:38696..39699+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_21825-T1 ID=CAN33_21825-T1|Name=CAN33_21825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1004bp|location=Sequence derived from alignment at NKJJ01000002.1:38696..39699+ (Aspergillus niger FDAARGOS_311)
ATGTCGGACGTTTACGCTGAAAACCTGCAGCGCGATGCTGAGGAGTCTCG
GAGGTATACCCCCCATGTCGGCACATATGTGTAAGAATTCTTAACACTGA
CCACCGTAAAGGCTAGATGAGCAATTTGATCTCCTGAGCGAGTATGCCTT
CCCCAAGCCCAAGATGGTTCGTTGATCGGAGCTGACATACACCTAGGAAT
CTTGGTTACCTCATCCACCCGGGGATCCTGCGTTCGCTCAGGCAGAGCAA
CAGTTCTCCCATCAAGATCGCTGATCTGGCCACCGGGACGGCACGCTTCC
TACGGCAGGTGGCTGAAAGTACCGACCCCATTCTGGCAAATGCCGTGCTT
GATGGGAGCGATCTTTCCGCTTCACAGTTTCCTGCCCCAAGCAGTCTCCC
GTCTAACATCCATCTACGGGTGCAGGACGTCCGAGCCCCCGTGCCGCGTG
AGTGGGAAGGATGCTACGACCTGGTGCATGTCCGCCAAATTGCTGCGGGG
CTGGCGCCAGATGAATGGCTGCCCGTCGTGGCCAACCTCGCGCGGCTGCT
GAAGCCAGGCGGGGCGATACAGTGGGAGGAATGCAACTTCTCTAATGTGG
TGCACTTGCGGGGTGGAGAAGGGGACGGTATGTCCTGTACGGTGGGGGCG
GCCCGGAGCCTAGGCCAGATGTTCCGGACAGGGCTGATGACCCATTTCTG
TCATGGTTGGGATCGTCTCGACACTGCCATGGCGGCTGCTGGGCTGGAAC
GCATTGTTGCTGACATGGTGGGTTCTGATCGTGTTCCGCATACGAGACGC
GCTCTGACCCTCAATGGCATGCACGTCATTTCTCGCTGGGCGATTGCCAA
GGCTCAAGCCGGGAACCTGCGTGATCCTGCCGGTCGCCTGGTGTCCTTGG
ATGAGGTGCAGGCCTTGGCTGACCAAGCCATGCGCGACATTGAGTCTGGC
TGTTACGTGCGCTTTGACATTCATGCGGCTTGGGGGTTTAAACCTATGGC
TTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:38696..39699+

>CAN33_21825-T1 ID=CAN33_21825-T1|Name=CAN33_21825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2673bp|location=Sequence derived from alignment at NKJJ01000002.1:38696..39699+ (Aspergillus niger FDAARGOS_311)
ATGTCGGACGTTTACGCTGAAAACCTGCAGCGCGATGCTGAGGAGTCTCG
GAGGCTAGATGAGCAATTTGATCTCCTGAGCGAGAATCTTGGTTACCTCA
TCCACCCGGGGATCCTGCGTTCGCTCAGGCAGAGCAACAGTTCTCCCATC
AAGATCGCTGATCTGGCCACCGGGACGGCACGCTTCCTACGGCAGGTGGC
TGAAAGTACCGACCCCATTCTGGCAAATGCCGTGCTTGATGGGAGCGATC
TTTCCGCTTCACAGTTTCCTGCCCCAAGCAGTCTCCCGTCTAACATCCAT
CTACGGGTGCAGGACGTCCGAGCCCCCGTGCCGCGTGAGTGGGAAGGATG
CTACGACCTGGTGCATGTCCGCCAAATTGCTGCGGGGCTGGCGCCAGATG
AATGGCTGCCCGTCGTGGCCAACCTCGCGCGGCTGCTGAAGCCAGGCGGG
GCGATACAGTGGGAGGAATGCAACTTCTCTAATGTGGTGCACTTGCGGGG
TGGAGAAGGGGACGGTATGTCCTGTACGGTGGGGGCGGCCCGGAGCCTAG
GCCAGATGTTCCGGACAGGGCTGATGACCCATTTCTGTCATGGTTGGGAT
CGTCTCGACACTGCCATGGCGGCTGCTGGGCTGGAACGCATTGTTGCTGA
CATGGTGGGTTCTGATCGTGTTCCGCATACGAGACGCGCTCTGACCCTCA
ATGGCATGCACGTCATTTCTCGCTGGGCGATTGCCAAGGCTCAAGCCGGG
AACCTGCGTGATCCTGCCGGTCGCCTGGTGTCCTTGGATGAGGTGCAGGC
CTTGGCTGACCAAGCCATGCGCGACATTGAGTCTGGCTGTTACGTGCGCT
TTGACATTCATGCGGCTTGGGGGTTTAAACCTATGGCTTGAATGTCGGAC
GTTTACGCTGAAAACCTGCAGCGCGATGCTGAGGAGTCTCGGAGGCTAGA
TGAGCAATTTGATCTCCTGAGCGAGAATCTTGGTTACCTCATCCACCCGG
GGATCCTGCGTTCGCTCAGGCAGAGCAACAGTTCTCCCATCAAGATCGCT
GATCTGGCCACCGGGACGGCACGCTTCCTACGGCAGGTGGCTGAAAGTAC
CGACCCCATTCTGGCAAATGCCGTGCTTGATGGGAGCGATCTTTCCGCTT
CACAGTTTCCTGCCCCAAGCAGTCTCCCGTCTAACATCCATCTACGGGTG
CAGGACGTCCGAGCCCCCGTGCCGCGTGAGTGGGAAGGATGCTACGACCT
GGTGCATGTCCGCCAAATTGCTGCGGGGCTGGCGCCAGATGAATGGCTGC
CCGTCGTGGCCAACCTCGCGCGGCTGCTGAAGCCAGGCGGGGCGATACAG
TGGGAGGAATGCAACTTCTCTAATGTGGTGCACTTGCGGGGTGGAGAAGG
GGACGGTATGTCCTGTACGGTGGGGGCGGCCCGGAGCCTAGGCCAGATGT
TCCGGACAGGGCTGATGACCCATTTCTGTCATGGTTGGGATCGTCTCGAC
ACTGCCATGGCGGCTGCTGGGCTGGAACGCATTGTTGCTGACATGGTGGG
TTCTGATCGTGTTCCGCATACGAGACGCGCTCTGACCCTCAATGGCATGC
ACGTCATTTCTCGCTGGGCGATTGCCAAGGCTCAAGCCGGGAACCTGCGT
GATCCTGCCGGTCGCCTGGTGTCCTTGGATGAGGTGCAGGCCTTGGCTGA
CCAAGCCATGCGCGACATTGAGTCTGGCTGTTACGTGCGCTTTGACATTC
ATGCGGCTTGGGGGTTTAAACCTATGGCTTGAATGTCGGACGTTTACGCT
GAAAACCTGCAGCGCGATGCTGAGGAGTCTCGGAGGCTAGATGAGCAATT
TGATCTCCTGAGCGAGAATCTTGGTTACCTCATCCACCCGGGGATCCTGC
GTTCGCTCAGGCAGAGCAACAGTTCTCCCATCAAGATCGCTGATCTGGCC
ACCGGGACGGCACGCTTCCTACGGCAGGTGGCTGAAAGTACCGACCCCAT
TCTGGCAAATGCCGTGCTTGATGGGAGCGATCTTTCCGCTTCACAGTTTC
CTGCCCCAAGCAGTCTCCCGTCTAACATCCATCTACGGGTGCAGGACGTC
CGAGCCCCCGTGCCGCGTGAGTGGGAAGGATGCTACGACCTGGTGCATGT
CCGCCAAATTGCTGCGGGGCTGGCGCCAGATGAATGGCTGCCCGTCGTGG
CCAACCTCGCGCGGCTGCTGAAGCCAGGCGGGGCGATACAGTGGGAGGAA
TGCAACTTCTCTAATGTGGTGCACTTGCGGGGTGGAGAAGGGGACGGTAT
GTCCTGTACGGTGGGGGCGGCCCGGAGCCTAGGCCAGATGTTCCGGACAG
GGCTGATGACCCATTTCTGTCATGGTTGGGATCGTCTCGACACTGCCATG
GCGGCTGCTGGGCTGGAACGCATTGTTGCTGACATGGTGGGTTCTGATCG
TGTTCCGCATACGAGACGCGCTCTGACCCTCAATGGCATGCACGTCATTT
CTCGCTGGGCGATTGCCAAGGCTCAAGCCGGGAACCTGCGTGATCCTGCC
GGTCGCCTGGTGTCCTTGGATGAGGTGCAGGCCTTGGCTGACCAAGCCAT
GCGCGACATTGAGTCTGGCTGTTACGTGCGCTTTGACATTCATGCGGCTT
GGGGGTTTAAACCTATGGCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_21825CAN33_21825Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21825-T1.exon1CAN33_21825-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_21825-T1.exon2CAN33_21825-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_21825-T1.exon3CAN33_21825-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21825-T1.cdsCAN33_21825-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21825-T1CAN33_21825-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:38696..39699 +
Powered by Drupal