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CAN33_2205-T1, CAN33_2205-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2205-T1
Unique NameCAN33_2205-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1347435..1348700+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2205-T1 ID=CAN33_2205-T1|Name=CAN33_2205-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1266bp|location=Sequence derived from alignment at NKJJ01000004.1:1347435..1348700+ (Aspergillus niger FDAARGOS_311)
ATGCCCTTGATGCCCTCACGCCAGATTTATCTCCCCACGGAAATTGTGGT
GGAGATTATCTCTTACGCCGCCGCAGATGATGGCCATCGCCAGTCCACTC
TCTATGCCTGCTGCCTTGTCTCTCGCCAATGGTACTCAGTAGCCATCCCA
TATCTCTATGAGAAGCCGCGCGTGAGCGCCGGGACCGCTTTCAAGAGTTT
TACCGACACAATCTGCCCGACGATCGGCGCACGAAAGAACAAGATACATT
TGGGCAGTCTAGTCCACAAATTGGACCTCAGTGGGCTCGTCTATCATAGC
TCAAACAGTTTGACAGCACGACTGCTGGGAAGGGTGAAAGAGAATTTAGA
AGTCTTTCTGGCCCCAAGGATCTCCTTTGCGTAAGTACAAAACAACATGC
TCGTTGTGCATGCCTTCCGTCTGTCTTCGCCCACTTCAGAATACTTGATA
CTAACACTATAGAACAGCATCAACAGCCTTCCGGCTCTCTCCAAATGTAC
AAACATCAGACACCTCGACTTATCGCTAGTCGGCGATCCGGTCCCTTTTC
CCAACCTCAAGAAAGCGATCAGCAACCTCCGCAAATTAACCACCCTTCGT
CTTCCGCGCTCAACCTCCATCACCACCTACGACGACTCTGCAGCCACGAT
AGAATGGCCTCCTAACCTCCAGCGTCTACAATTCAGTGGCCACTACCGTT
CCATACCCATGTCCTCCTTTCCTTGGCCTCGCACATTGACTACCCTCACT
CTAAAGAACTGCGCCGATCTCTCCATGTCCAGCCTTGGCAGCCTAATGAG
CAACCCCCAACTAGCCACCCTCAAACGCTTCATCGTCTCCGGCTCCAACC
GTAACCTGCAACCAGAATCCATCAATGCCATCCCAGTTTTCCTCCCTGAA
TTATCCTCTCTCAGTATCCCTGGCGATCTAGTCAATGATTCCTTCTTCGA
TATCCTCAGCCACATGCACCCCCCACTACCTCTCGAGGATATCGAGTTTG
GATTCCCAAGTCTAGACGCCAACGTGACCTTCAGCACGAGCTCGTTAATC
ACGGCGATGGAATACGGCCTAGCAAACCTCCGATCGGTGGGTTTCTCGGA
GCTCTTCTGCACCAACCAGCGAATTCTGGAAGACACGGAGATCGATGACT
TCATTCATAGCCGGTTCTCGAAGAAGGAGCGGAGAAATTCCAAATCGTCT
TTCAAGAATGGAGTTGAGAAGAGCGATTATGTGGATGATGATACGATTGG
CGTTTATTACATATGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1347435..1348700+

>CAN33_2205-T1 ID=CAN33_2205-T1|Name=CAN33_2205-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2358bp|location=Sequence derived from alignment at NKJJ01000004.1:1347435..1348700+ (Aspergillus niger FDAARGOS_311)
ATGCCCTTGATGCCCTCACGCCAGATTTATCTCCCCACGGAAATTGTGGT
GGAGATTATCTCTTACGCCGCCGCAGATGATGGCCATCGCCAGTCCACTC
TCTATGCCTGCTGCCTTGTCTCTCGCCAATGGTACTCAGTAGCCATCCCA
TATCTCTATGAGAAGCCGCGCGTGAGCGCCGGGACCGCTTTCAAGAGTTT
TACCGACACAATCTGCCCGACGATCGGCGCACGAAAGAACAAGATACATT
TGGGCAGTCTAGTCCACAAATTGGACCTCAGTGGGCTCGTCTATCATAGC
TCAAACAGTTTGACAGCACGACTGCTGGGAAGGGTGAAAGAGAATTTAGA
AGTCTTTCTGGCCCCAAGGATCTCCTTTGCCATCAACAGCCTTCCGGCTC
TCTCCAAATGTACAAACATCAGACACCTCGACTTATCGCTAGTCGGCGAT
CCGGTCCCTTTTCCCAACCTCAAGAAAGCGATCAGCAACCTCCGCAAATT
AACCACCCTTCGTCTTCCGCGCTCAACCTCCATCACCACCTACGACGACT
CTGCAGCCACGATAGAATGGCCTCCTAACCTCCAGCGTCTACAATTCAGT
GGCCACTACCGTTCCATACCCATGTCCTCCTTTCCTTGGCCTCGCACATT
GACTACCCTCACTCTAAAGAACTGCGCCGATCTCTCCATGTCCAGCCTTG
GCAGCCTAATGAGCAACCCCCAACTAGCCACCCTCAAACGCTTCATCGTC
TCCGGCTCCAACCGTAACCTGCAACCAGAATCCATCAATGCCATCCCAGT
TTTCCTCCCTGAATTATCCTCTCTCAGTATCCCTGGCGATCTAGTCAATG
ATTCCTTCTTCGATATCCTCAGCCACATGCACCCCCCACTACCTCTCGAG
GATATCGAGTTTGGATTCCCAAGTCTAGACGCCAACGTGACCTTCAGCAC
GAGCTCGTTAATCACGGCGATGGAATACGGCCTAGCAAACCTCCGATCGG
TGGGTTTCTCGGAGCTCTTCTGCACCAACCAGCGAATTCTGGAAGACACG
GAGATCGATGACTTCATTCATAGCCGGTTCTCGAAGAAGGAGCGGAGAAA
TTCCAAATCGTCTTTCAAGAATGGAGTTGAGAAGAGCGATTATGTGGATG
ATGATACGATTGGCGTTTATTACATATGAATGCCCTTGATGCCCTCACGC
CAGATTTATCTCCCCACGGAAATTGTGGTGGAGATTATCTCTTACGCCGC
CGCAGATGATGGCCATCGCCAGTCCACTCTCTATGCCTGCTGCCTTGTCT
CTCGCCAATGGTACTCAGTAGCCATCCCATATCTCTATGAGAAGCCGCGC
GTGAGCGCCGGGACCGCTTTCAAGAGTTTTACCGACACAATCTGCCCGAC
GATCGGCGCACGAAAGAACAAGATACATTTGGGCAGTCTAGTCCACAAAT
TGGACCTCAGTGGGCTCGTCTATCATAGCTCAAACAGTTTGACAGCACGA
CTGCTGGGAAGGGTGAAAGAGAATTTAGAAGTCTTTCTGGCCCCAAGGAT
CTCCTTTGCCATCAACAGCCTTCCGGCTCTCTCCAAATGTACAAACATCA
GACACCTCGACTTATCGCTAGTCGGCGATCCGGTCCCTTTTCCCAACCTC
AAGAAAGCGATCAGCAACCTCCGCAAATTAACCACCCTTCGTCTTCCGCG
CTCAACCTCCATCACCACCTACGACGACTCTGCAGCCACGATAGAATGGC
CTCCTAACCTCCAGCGTCTACAATTCAGTGGCCACTACCGTTCCATACCC
ATGTCCTCCTTTCCTTGGCCTCGCACATTGACTACCCTCACTCTAAAGAA
CTGCGCCGATCTCTCCATGTCCAGCCTTGGCAGCCTAATGAGCAACCCCC
AACTAGCCACCCTCAAACGCTTCATCGTCTCCGGCTCCAACCGTAACCTG
CAACCAGAATCCATCAATGCCATCCCAGTTTTCCTCCCTGAATTATCCTC
TCTCAGTATCCCTGGCGATCTAGTCAATGATTCCTTCTTCGATATCCTCA
GCCACATGCACCCCCCACTACCTCTCGAGGATATCGAGTTTGGATTCCCA
AGTCTAGACGCCAACGTGACCTTCAGCACGAGCTCGTTAATCACGGCGAT
GGAATACGGCCTAGCAAACCTCCGATCGGTGGGTTTCTCGGAGCTCTTCT
GCACCAACCAGCGAATTCTGGAAGACACGGAGATCGATGACTTCATTCAT
AGCCGGTTCTCGAAGAAGGAGCGGAGAAATTCCAAATCGTCTTTCAAGAA
TGGAGTTGAGAAGAGCGATTATGTGGATGATGATACGATTGGCGTTTATT
ACATATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2205CAN33_2205Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2205-T1.exon1CAN33_2205-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2205-T1.exon2CAN33_2205-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2205-T1.cdsCAN33_2205-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2205-T1CAN33_2205-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR032675
DBxrefPFAM:PF12937
ProductF-box-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1347435..1348700 +
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