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CAN33_22080-T1, CAN33_22080-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22080-T1
Unique NameCAN33_22080-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:185490..186260-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22080-T1 ID=CAN33_22080-T1|Name=CAN33_22080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=771bp|location=Sequence derived from alignment at NKJJ01000002.1:185490..186260- (Aspergillus niger FDAARGOS_311)
ATGGTCCGCCTAAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGA
TCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCAATAAGAACCCTCTAT
CCAAATCAAAGTCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGAT
GCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACT
CATGTTTGGCGATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGG
GTATTAGTGGTATGTTTTCCTTCTCCTCTAGCTCTATTCCTCTTTGAATT
GGGTTTTTTTGCCTGCTGGGTTGTGATAATGAGACTAATTACTTGTTTGA
TGAATATCCAGTGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTC
GGTGTCCTCGCGCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATG
TCGCAGGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGC
TTGTGTGTTTCGGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGG
AGGAGGCGATTCGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCG
GAGGAGAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGC
TGGGGAGGAGAGTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGA
TGATGGAGAGTGAGGATGATGATTGATTTGAGTACGAACGGGATTTACGT
TTGATATGTTGGAAGGCATAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:185490..186260-

>CAN33_22080-T1 ID=CAN33_22080-T1|Name=CAN33_22080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1773bp|location=Sequence derived from alignment at NKJJ01000002.1:185490..186260- (Aspergillus niger FDAARGOS_311)
GCATAGTGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTCGGTGT
CCTCGCGCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATGTCGCA
GGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGCTTGTG
TGTTTCGGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGGAGGAG
GCGATTCGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCGGAGGA
GAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGCTGGGG
AGGAGAGTACGCCGGTTACTGGGGAGGATGTGATGGTCCGCCTAAAACAC
CGCTACATCCTCCTCGACATCCTCTACCCCGATCCCTCAACATGGCCCCC
AGCCGCCTCCCGCACCAATAAGAACCCTCTATCCAAATCAAAGTCGCAAG
CACAGCTACAAATCCATTCGCCCACATCCGATGCCCTAACACCGGGCCTG
CTAGCGAAAATGGTCAGAGAGGAAGTCTCACTCATGTTTGGCGATTACGG
CGTCGGTAGATTGGGTGGTGCGGGCGCGGGGGGTATTAGTGGCATAGTGA
AATACCTCTCCCCTGCTACTTCGACGGCTATTATTCGGTGTCCTCGCGCG
TCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATGTCGCAGGTTCCGGG
GTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGCTTGTGTGTTTCGGG
TTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGGAGGAGGCGATTCGG
AGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCGGAGGAGAGTGGGGT
TTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGCTGGGGAGGAGAGTA
CGCCGGTTACTGGGGAGGATGTGATGGTCCGCCTAAAACACCGCTACATC
CTCCTCGACATCCTCTACCCCGATCCCTCAACATGGCCCCCAGCCGCCTC
CCGCACCAATAAGAACCCTCTATCCAAATCAAAGTCGCAAGCACAGCTAC
AAATCCATTCGCCCACATCCGATGCCCTAACACCGGGCCTGCTAGCGAAA
ATGGTCAGAGAGGAAGTCTCACTCATGTTTGGCGATTACGGCGTCGGTAG
ATTGGGTGGTGCGGGCGCGGGGGGTATTAGTGGCATAGTGAAATACCTCT
CCCCTGCTACTTCGACGGCTATTATTCGGTGTCCTCGCGCGTCGTTCCGG
CTTGTGTGGACGGCGCTGACCTGCATGTCGCAGGTTCCGGGGTTTAGTGA
GGGTGGGTCGAAGAGGACGACGAGAGCTTGTGTGTTTCGGGTTATTAGGG
TGTCCGGGACGATGCGGAAGGCGGAGGAGGAGGCGATTCGGAGGGCGAGG
AGGGAGATTGTGCGGTTGAGGGAGGCGGAGGAGAGTGGGGTTTTGGAGGG
GTTGTTGGGGGGTTTAGTGGATGTGGCTGGGGAGGAGAGTACGCCGGTTA
CTGGGGAGGATGTGATGGTCCGCCTAAAACACCGCTACATCCTCCTCGAC
ATCCTCTACCCCGATCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCAA
TAAGAACCCTCTATCCAAATCAAAGTCGCAAGCACAGCTACAAATCCATT
CGCCCACATCCGATGCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAGA
GAGGAAGTCTCACTCATGTTTGGCGATTACGGCGTCGGTAGATTGGGTGG
TGCGGGCGCGGGGGGTATTAGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0016070RNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004540ribonuclease activity
GO:0004526ribonuclease P activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22080CAN33_22080Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22080-T1CAN33_22080-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22080-T1.cdsCAN33_22080-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22080-T1.exon3CAN33_22080-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_22080-T1.exon2CAN33_22080-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22080-T1.exon1CAN33_22080-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR002759
DBxrefInterPro:IPR016819
DBxrefInterPro:IPR038085
DBxrefPFAM:PF01900
ProductRpp14/Pop5 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:185490..186260 -
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