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CAN33_22100-T1, CAN33_22100-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22100-T1
Unique NameCAN33_22100-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:197304..198716-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22100-T1 ID=CAN33_22100-T1|Name=CAN33_22100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1413bp|location=Sequence derived from alignment at NKJJ01000002.1:197304..198716- (Aspergillus niger FDAARGOS_311)
ATGAATGCGACTGACGTACTGGCACGTGATGTCCAAGATTGCCGGATCGG
GAACAACCACAACTCGCCTGTGCCTTGAGGAAAGAAATACTCTCGTCAAT
TGTTGTTTTTTATGCTACATTCTTGCTCTACTTCTTTTGGCAGGATAAAA
TCTGCGAGTTTGAGAATCTTATCATTTTAGATTCGCGACTTTAGTATCCC
AGCCAACCAGCAGCACAAGAACAAACAAATCAAAGCCGACGACCTGCGAA
TCTCCGCAGGATCGCCGCCGACAGAAACGCATCCCGTCACTTCTCCTACC
TTTTCTACGTTTACTCGGTCGCAGATCCCAAACATGATGATGGAAGACGA
AGATGATGATTTTTATGACCCCGCCGATGCGGTGCCTGTAACTCAGCATC
AAAACGGGTCTCAGCATCCCCAGGCAGATTCAGGACCCCACGACGCCAAT
GATGCGGAAGAGGAGGAGATAGAGGTGGAAGAAGATGAGGTATGCGCATG
GCGACAACTAATCTATCTTGTTACTGTCGCTAACTCTCGCGTAGGATGAC
TTCAATATTATTACCGAAGCACCAGCAGACGCACCCCCTCCGGAAGTGTA
AGTCCGCTACCTCTGTTCAACGCATTTCACCTTGTTAATTTATTGAACAG
CCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCT
CTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCT
AAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCC
TCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATG
TCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACA
GACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGG
CTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGG
CCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAG
AAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCACC
AATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGC
CTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATG
CAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCAT
GGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAAC
CCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGT
GGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGG
GAGAAGGTGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:197304..198716-

>CAN33_22100-T1 ID=CAN33_22100-T1|Name=CAN33_22100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3588bp|location=Sequence derived from alignment at NKJJ01000002.1:197304..198716- (Aspergillus niger FDAARGOS_311)
CCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCT
CTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCT
AAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCC
TCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATG
TCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACA
GACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGG
CTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGG
CCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAG
AAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCACC
AATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGC
CTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATG
CAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCAT
GGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAAC
CCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGT
GGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGG
GAGAAGGTGGTAAGATGACTTCAATATTATTACCGAAGCACCAGCAGACG
CACCCCCTCCGGAAGTGCAGATTCAGGACCCCACGACGCCAATGATGCGG
AAGAGGAGGAGATAGAGGTGGAAGAAGATGAGATGAATGCGACTGACCCC
ACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCTCTG
CAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCTAAA
CTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCCTCA
GAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATGTCC
ACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACAGAC
ATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGGCTC
CGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGGCCA
GCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAGAAG
AAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCACCAAT
GCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGCCTC
CTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATGCAA
GGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCATGGA
TCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAACCCG
GCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGTGGT
GGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGGGAG
AAGGTGGTAAGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCAC
CCCCTCCGGAAGTGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAG
AGGAGGAGATAGAGGTGGAAGAAGATGAGATGAATGCGACTGACCCCACA
TCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCTCTGCAG
ATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCTAAACTT
GAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCCTCAGAA
GCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATGTCCACG
CGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACAGACATG
GACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGGCTCCGA
CATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGGCCAGCT
ATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAGAAGAAA
CAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCACCAATGCC
CGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGCCTCCTA
TGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATGCAAGGC
ATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCATGGATCC
TATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAACCCGGCG
CAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGTGGTGGC
CAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGGGAGAAG
GTGGTAAGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCC
CTCCGGAAGTGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGAGG
AGGAGATAGAGGTGGAAGAAGATGAGATGAATGCGACTGACCCCACATCC
TCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCTCTGCAGATG
TCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCTAAACTTGAA
TCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCCTCAGAAGCC
CGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATGTCCACGCGA
ACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACAGACATGGAC
ACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGGCTCCGACAT
TACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGGCCAGCTATG
TGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAGAAGAAACAA
TTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCACCAATGCCCGG
AGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGCCTCCTATGC
CCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATGCAAGGCATG
CTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCATGGATCCTAT
GGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAACCCGGCGCAG
GCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGTGGTGGCCAG
CCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGGGAGAAGGTG
GTAAGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCCCTC
CGGAAGTGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGAGGAGG
AGATAGAGGTGGAAGAAGATGAGATGAATGCGACTGAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FIP1CAN33_22100Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22100-T1CAN33_22100-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22100-T1.cdsCAN33_22100-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22100-T1.exon4CAN33_22100-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_22100-T1.exon3CAN33_22100-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_22100-T1.exon2CAN33_22100-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22100-T1.exon1CAN33_22100-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264OAU
DBxrefInterPro:IPR007854
DBxrefPFAM:PF05182
Productcleavage polyadenylation factor subunit fip1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:197304..198716 -
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