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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:198781..200004+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22105-T1 ID=CAN33_22105-T1|Name=CAN33_22105-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1224bp|location=Sequence derived from alignment at NKJJ01000002.1:198781..200004+ (Aspergillus niger FDAARGOS_311)
ATGTCACAATCCGAACAGCCGAGCCATAGCTCGACTCCACGCTCGTTTAC
CAGCCAGACTGCGTCAGCAGAAGATCTGCTTAAATCGCAGACAGTTGGTC
TCGTCCATCTTTCCGACTTTCGCAAACGTCGCGCCGAGGTCTTGGAGCAA
AAAGAGCGCGAAGCCCATGACAAATCCCTAGGAAGATTCACCTCCAGAAG
TGCAACTCCTTCGACTGGTGAAGTGACTGACGGGTAAGTTAAAGCGCATC
TCCAGGAAATCCCGGCTTGTAACTGATCGCAAAGCGTAAAGCAACTCGAC
GCCACGCAGCGAGGGCCCGCCGAAGAAGAAGAAAAAGAAGCCTATCACCA
AAAGTAAACTTTCATTCGGCGATGATGATGAGGAGGAAGAGAACGATAGC
ACCGCTGATGTAGCGGCAACGCCGCGGGATTCGAGTATTCCCCGCTCTGC
TTCCAGGACCCCCGCCGACGACAGCTCTGCGCCCTCATCGCGTCGCATTA
CGCCGAACCCAAATGCCCCGCCTCCTCCGAAAGCAATGACAAAAGCTGCA
TTGAAGGCAGAGGCAGAGGCACGGGATGCGCTCCGCAAGGAGTTCCTTGC
CATGCAGGAAGCCGTGAAGAATACAGAGATATTAATCCCCTTTATATTCT
TCGATGGGACCAACATACCTGCAGGGACAGTCAGGGTCAAGAAAGGCGAT
CACGTTTGGTTGTTCTTGGACCGCTGTCGAAAGGTTGGAGCAGAATTGGG
TGTTGGCGGTAACAGCGGAGCATCCAAGGCTCGCAAAGACAATCGTCGCG
AGTGGGCTCGAGTCAGTGTTGATGACCTCATGTTGGTCAAAGGAGAAATC
ATCGTTCCACATGTATGTGTTCCACTATCCCGCATGGCTGTATACGCTGA
CTGGTACAGCATTACGAACTTTATTATTTCATCGCCAACAGTGTACCCGA
TTTCACAAAGGCGGGTGGTCTGTTGTTCGATTATTCCAACAAACCACCTC
CGGCGCCTTCAACAGACGATCCTTTATCGCGCCCGGAAAGCAGCCAACTA
GAGGGTGCTGATAAAGATCCCTCTTTGACCAAAGTGGTTGATAGACGATG
GTATGAGCGGAACAAACACATCTTTCCGGCTAGTCTTTGGCGAGAATATG
AACCAGGGCCCGAGTTTGAGGAGAAGATGCGGACGACGAGGCGTGATGCT
TCTGGAAATACGTTCTTTTTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:198781..200004+ >CAN33_22105-T1 ID=CAN33_22105-T1|Name=CAN33_22105-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3168bp|location=Sequence derived from alignment at NKJJ01000002.1:198781..200004+ (Aspergillus niger FDAARGOS_311)
ATGTCACAATCCGAACAGCCGAGCCATAGCTCGACTCCACGCTCGTTTAC
CAGCCAGACTGCGTCAGCAGAAGATCTGCTTAAATCGCAGACAGTTGGTC
TCGTCCATCTTTCCGACTTTCGCAAACGTCGCGCCGAGGTCTTGGAGCAA
AAAGAGCGCGAAGCCCATGACAAATCCCTAGGAAGATTCACCTCCAGAAG
TGCAACTCCTTCGACTGGTGAAGTGACTGACGGTAAACTTTCATTCGGCG
ATGATGATGAGGAGGAAGAGAACGATAGCACCGCTGATGTAGCGGCAACG
CCGCGGGATTCGAGTATTCCCCGCTCTGCTTCCAGGACCCCCGCCGACGA
CAGCTCTGCGCCCTCATCGCGTCGCATTACGCCGAACCCAAATGCCCCGC
CTCCTCCGAAAGCAATGACAAAAGCTGCATTGAAGGCAGAGGCAGAGGCA
CGGGATGCGCTCCGCAAGGAGTTCCTTGCCATGCAGGAAGCCGTGAAGAA
TACAGAGATATTAATCCCCTTTATATTCTTCGATGGGACCAACATACCTG
CAGGGACAGTCAGGGTCAAGAAAGGCGATCACGTTTGGTTGTTCTTGGAC
CGCTGTCGAAAGGTTGGAGCAGAATTGGGTGTTGGCGGTAACAGCGGAGC
ATCCAAGGCTCGCAAAGACAATCGTCGCGAGTGGGCTCGAGTCAGTGTTG
ATGACCTCATGTTGGTCAAAGGAGAAATCATCGTTCCACATCATTACGAA
CTTTATTATTTCATCGCCAACAGTGTACCCGATTTCACAAAGGCGGGTGG
TCTGTTGTTCGATTATTCCAACAAACCACCTCCGGCGCCTTCAACAGACG
ATCCTTTATCGCGCCCGGAAAGCAGCCAACTAGAGGGTGCTGATAAAGAT
CCCTCTTTGACCAAAGTGGTTGATAGACGATGGTATGAGCGGAACAAACA
CATCTTTCCGGCTAGTCTTTGGCGAGAATATGAACCAGGGCCCGAGTTTG
AGGAGAAGATGCGGACGACGAGGCGTGATGCTTCTGGAAATACGTTCTTT
TTCTAAATGTCACAATCCGAACAGCCGAGCCATAGCTCGACTCCACGCTC
GTTTACCAGCCAGACTGCGTCAGCAGAAGATCTGCTTAAATCGCAGACAG
TTGGTCTCGTCCATCTTTCCGACTTTCGCAAACGTCGCGCCGAGGTCTTG
GAGCAAAAAGAGCGCGAAGCCCATGACAAATCCCTAGGAAGATTCACCTC
CAGAAGTGCAACTCCTTCGACTGGTGAAGTGACTGACGGTAAACTTTCAT
TCGGCGATGATGATGAGGAGGAAGAGAACGATAGCACCGCTGATGTAGCG
GCAACGCCGCGGGATTCGAGTATTCCCCGCTCTGCTTCCAGGACCCCCGC
CGACGACAGCTCTGCGCCCTCATCGCGTCGCATTACGCCGAACCCAAATG
CCCCGCCTCCTCCGAAAGCAATGACAAAAGCTGCATTGAAGGCAGAGGCA
GAGGCACGGGATGCGCTCCGCAAGGAGTTCCTTGCCATGCAGGAAGCCGT
GAAGAATACAGAGATATTAATCCCCTTTATATTCTTCGATGGGACCAACA
TACCTGCAGGGACAGTCAGGGTCAAGAAAGGCGATCACGTTTGGTTGTTC
TTGGACCGCTGTCGAAAGGTTGGAGCAGAATTGGGTGTTGGCGGTAACAG
CGGAGCATCCAAGGCTCGCAAAGACAATCGTCGCGAGTGGGCTCGAGTCA
GTGTTGATGACCTCATGTTGGTCAAAGGAGAAATCATCGTTCCACATCAT
TACGAACTTTATTATTTCATCGCCAACAGTGTACCCGATTTCACAAAGGC
GGGTGGTCTGTTGTTCGATTATTCCAACAAACCACCTCCGGCGCCTTCAA
CAGACGATCCTTTATCGCGCCCGGAAAGCAGCCAACTAGAGGGTGCTGAT
AAAGATCCCTCTTTGACCAAAGTGGTTGATAGACGATGGTATGAGCGGAA
CAAACACATCTTTCCGGCTAGTCTTTGGCGAGAATATGAACCAGGGCCCG
AGTTTGAGGAGAAGATGCGGACGACGAGGCGTGATGCTTCTGGAAATACG
TTCTTTTTCTAAATGTCACAATCCGAACAGCCGAGCCATAGCTCGACTCC
ACGCTCGTTTACCAGCCAGACTGCGTCAGCAGAAGATCTGCTTAAATCGC
AGACAGTTGGTCTCGTCCATCTTTCCGACTTTCGCAAACGTCGCGCCGAG
GTCTTGGAGCAAAAAGAGCGCGAAGCCCATGACAAATCCCTAGGAAGATT
CACCTCCAGAAGTGCAACTCCTTCGACTGGTGAAGTGACTGACGGTAAAC
TTTCATTCGGCGATGATGATGAGGAGGAAGAGAACGATAGCACCGCTGAT
GTAGCGGCAACGCCGCGGGATTCGAGTATTCCCCGCTCTGCTTCCAGGAC
CCCCGCCGACGACAGCTCTGCGCCCTCATCGCGTCGCATTACGCCGAACC
CAAATGCCCCGCCTCCTCCGAAAGCAATGACAAAAGCTGCATTGAAGGCA
GAGGCAGAGGCACGGGATGCGCTCCGCAAGGAGTTCCTTGCCATGCAGGA
AGCCGTGAAGAATACAGAGATATTAATCCCCTTTATATTCTTCGATGGGA
CCAACATACCTGCAGGGACAGTCAGGGTCAAGAAAGGCGATCACGTTTGG
TTGTTCTTGGACCGCTGTCGAAAGGTTGGAGCAGAATTGGGTGTTGGCGG
TAACAGCGGAGCATCCAAGGCTCGCAAAGACAATCGTCGCGAGTGGGCTC
GAGTCAGTGTTGATGACCTCATGTTGGTCAAAGGAGAAATCATCGTTCCA
CATCATTACGAACTTTATTATTTCATCGCCAACAGTGTACCCGATTTCAC
AAAGGCGGGTGGTCTGTTGTTCGATTATTCCAACAAACCACCTCCGGCGC
CTTCAACAGACGATCCTTTATCGCGCCCGGAAAGCAGCCAACTAGAGGGT
GCTGATAAAGATCCCTCTTTGACCAAAGTGGTTGATAGACGATGGTATGA
GCGGAACAAACACATCTTTCCGGCTAGTCTTTGGCGAGAATATGAACCAG
GGCCCGAGTTTGAGGAGAAGATGCGGACGACGAGGCGTGATGCTTCTGGA
AATACGTTCTTTTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007005 |
| DBxref | PFAM:PF04921 |
| Product | XAP5 circadian clock regulator family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:198781..200004 + |
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