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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:230420..233369+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22165-T1 ID=CAN33_22165-T1|Name=CAN33_22165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2950bp|location=Sequence derived from alignment at NKJJ01000002.1:230420..233369+ (Aspergillus niger FDAARGOS_311)
ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGC
TGCGCAGTCCCTGAACACCACTTCATCGATCGCCGCCCATTCCTCATTGT
CCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG
GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGT
TGGGCTGCAAGATATGGCGACACGATTTTGGGGGGCAGCTCCTGGGACGG
GGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC
AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTT
CTCCGACATCCTCCAGGCAGTCATGAAATTTAGTGGTTTCTTCTCGTATC
TGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGTAAATACCCACTGG
CCCCGGCTAGTCGTTGTTGTGAAAATGGTCAGGCTAACCTATCAAGGCTC
TCATATTGAACAGGATTACCATATATGCTTCCACTAGAAGACACCTTAAT
CTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTTCCCATTGTCCTCTT
TATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCC
CGGAATACTCTACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTC
GACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTAAGCTCCACCCTTTT
GCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTC
CTGTAAATGCCTCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCG
GTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAGACCGTGTCTTGCGC
TTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAAC
ACTCGCTTGCATTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGT
CTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCTAAAGATATCGCTGG
GGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAG
AGCGAATGAATGTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGT
TGCAACAGTCTGACCTCAAACGTTCTAGATGTCATTGGCAGACAAAGTCG
TTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTA
TGGCATGGGGCTTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTGGTT
CTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTTCCGCACCTTCTAAT
CCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTA
TCACAGCATTTTCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGA
GAAAGATTCTCTCTAGCACATGAGAATATGCAGGGCGCCAGCCAGATTCA
GAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGA
TCGGTTACACGGCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAA
GGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTAGAACAGGACAGGCT
GGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTG
ACCCTTCCGGGGATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATT
CCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCGCGCGAAAAGAAGAT
CGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAG
GCGGTGTGGGTACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCC
TTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGGATTTCTTACGGTTT
GGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGA
AATCCGCGGTAGGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAAC
CGCATGGATACTCTAGACTTTTGGATTTTGACAGATGATGGAGTTTTAGA
GATGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAG
AAAGGAATCAGGCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGAT
GAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCCTGGGGCAATCAGGA
CCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGA
GCGTCATATCGATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAA
TCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCCTTTCCAGGTCGTTT
CTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCT
TGGCACGACTGCTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGC
ATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGTCGGATAATGACCCG
TCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAA
GCTCACGATTGGCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGC
AAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAAAACCTCATCCTTTC
GCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGG
AATCGGGCGCCTCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGC
CAGACCAACCCACGGTCCATCATCACCTGGCCATGTCGGTGTCTCTGTAT
TTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTG
TGACATGCCGCCAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAA
back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:230420..233369+ >CAN33_22165-T1 ID=CAN33_22165-T1|Name=CAN33_22165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5778bp|location=Sequence derived from alignment at NKJJ01000002.1:230420..233369+ (Aspergillus niger FDAARGOS_311)
ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGC
TGCGCAGTCCCTGAACACCACTTCATCGATCGCCGCCCATTCCTCATTGT
CCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG
GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGT
TGGGCTGCAAGATATGGCGACACGATTTTGGGGGGCAGCTCCTGGGACGG
GGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC
AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTT
CTCCGACATCCTCCAGGCAGTCATGAAATTTAGTGGTTTCTTCTCGTATC
TGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGCTCTCATATTGAAC
AGGATTACCATATATGCTTCCACTAGAAGACACCTTAATCTGGATTGGAC
TAGGCGATTGGCTCTGCGGATTGTTCCCATTGTCCTCTTTATAACTCAAA
TCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCT
ACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGG
AGGCGGTGGCTTTTTGCATTCCCTAAGCTCCACCCTTTTGCCTTGGGAAA
CAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCC
TCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACG
CCTCTGCCTCAGTCACTTTGTCGAGACCGTGTCTTGCGCTTTGCAGGGAC
GAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCA
TTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATT
TGGGTTGTCCAAGCAAAGCAGTTCTAAAGATATCGCTGGGGAGGGCGGGC
AATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAAT
GTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGTTGCAACAGTCT
GACCTCAAACGTTCTAGATGTCATTGGCAGACAAAGTCGTTACCGCTTGG
TGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGC
TTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTGGTTCTGAAATTTCC
GACTGTCTGCATTGTAGGGTTCGTTCCGCACCTTCTAATCCTGCTAGGAA
TTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTT
TCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTC
TCTAGCACATGAGAATATGCAGGGCGCCAGCCAGATTCAGAATATTCGTC
TTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACG
GCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGT
TTCCGCGCGCAGGATGACTTGGCTAGAACAGGACAGGCTGGCCGAAATAG
AGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGG
GATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATTCCCGAGTCAAC
CGTGGAATGGGAGAGCGGATACTCGCGCGAAAAGAAGATCGAGAAGCCCA
AGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGT
ACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGG
CATCTTCTATCTCGTCCTGAAGTGGATTTCTTACGGTTTGGACAAGCTTC
TTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTA
GGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATAC
TCTAGACTTTTGGATTTTGACAGATGATGGAGTTTTAGAGATGCCTGACG
ATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAG
GCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGATGAGAAACTCTA
CGGTTGGTGGAAAGTGGGAGGCTCCTGGGGCAATCAGGACCAGACCTCTG
ACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCG
ATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCG
TCGCACTCCCACTCAAGAAGACCCCTTTCCAGGTCGTTTCTCCCGAGAAA
GTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTG
CTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGC
TCACCTGGCTGCCGGCCGTGAGGGTCGGATAATGACCCGTCGGCAGTTCC
AGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTG
GCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGCAAGCCTACCTC
CGAGGAAGAAGCTGAGCTTCTCGAAAACCTCATCCTTTCGCGAAGAGCCG
AGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCC
TCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCC
ACGGTCCATCATCACCTGGCCATGTCGGTGTCTCTGTATTTGCGAAGATT
GCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGC
CAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAAATGTCCATACT
GCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCC
TGAACACCACTTCATCGATCGCCGCCCATTCCTCATTGTCCTCGTCGTCG
CGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAGGCAGAGGCTTT
TACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAG
ATATGGCGACACGATTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCT
GAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTCAGAGACGGCGT
TGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCC
TCCAGGCAGTCATGAAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGT
TGGTCGTTAACCTGCTTTACCGTGGCTCTCATATTGAACAGGATTACCAT
ATATGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGG
CTCTGCGGATTGTTCCCATTGTCCTCTTTATAACTCAAATCTACGCCCTT
CTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCTACGATACGCTA
TGGTACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCT
TTTTGCATTCCCTAAGCTCCACCCTTTTGCCTTGGGAAACAGACGAGCAG
TCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCCTCGGACATATC
ATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCA
GTCACTTTGTCGAGACCGTGTCTTGCGCTTTGCAGGGACGAGCAGTCGTC
ACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCATTTGCAGAGGC
GGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCA
AGCAAAGCAGTTCTAAAGATATCGCTGGGGAGGGCGGGCAATCTACCCTG
CATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAATGTCACCCCCGA
GTTATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACG
TTCTAGATGTCATTGGCAGACAAAGTCGTTACCGCTTGGTGAATACCGCT
TTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGCTTGTTCGGTAG
TTCGGCAGTTGGAAGCGACAATGTGGTTCTGAAATTTCCGACTGTCTGCA
TTGTAGGGTTCGTTCCGCACCTTCTAATCCTGCTAGGAATTATCGCCTGC
GTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTTTCGCTACCTAC
GCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATG
AGAATATGCAGGGCGCCAGCCAGATTCAGAATATTCGTCTTAACTGGCAC
GAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACGGCTTTAACGGC
TGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCA
GGATGACTTGGCTAGAACAGGACAGGCTGGCCGAAATAGAGTCTCATCGC
AAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGGGATATGTGCTC
TGAGAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGG
AGAGCGGATACTCGCGCGAAAAGAAGATCGAGAAGCCCAAGCCAGGCTCC
AGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGTACCTTCAGGGG
CGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATC
TCGTCCTGAAGTGGATTTCTTACGGTTTGGACAAGCTTCTTTCCCGGATG
GGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTAGGGTCACCAAA
GGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTT
GGATTTTGACAGATGATGGAGTTTTAGAGATGCCTGACGATCATGAATTC
GATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAGGCCGCTGGCTG
GGAGGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGA
AAGTGGGAGGCTCCTGGGGCAATCAGGACCAGACCTCTGACTATACACCG
TCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCGATGTCGACAAC
GGCCGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCA
CTCAAGAAGACCCCTTTCCAGGTCGTTTCTCCCGAGAAAGTACTCCGGCT
CATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTGCTGGATCCTCG
CGATCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTG
CCGGCCGTGAGGGTCGGATAATGACCCGTCGGCAGTTCCAGAAGCACGTT
GAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTGGCACGGCCTTC
CACATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAG
CTGAGCTTCTCGAAAACCTCATCCTTTCGCGAAGAGCCGAGATGTCATCC
GCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCCTCGGGTCTTGG
TCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCA
TCACCTGGCCATGTCGGTGTCTCTGTATTTGCGAAGATTGCCGTGTCAGT
CTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGCCAGGACGTTGC
AGGCTATGTCCGGCTATGGGTCCCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013083 |
| DBxref | PFAM:PF13920 |
| Product | Zinc finger C3HC4 type (RING finger) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:230420..233369 + |
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