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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:306108..307572+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22300-T1 ID=CAN33_22300-T1|Name=CAN33_22300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1465bp|location=Sequence derived from alignment at NKJJ01000002.1:306108..307572+ (Aspergillus niger FDAARGOS_311)
ATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGGACATTCGGGG
AGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTCAGCCCCATTG
AACCCGAGGCTCCTAAATGGGACAAGGTATGGATCTCTCACGACTAGACG
TCGACTCTCGCTGGGGTTCCTCATCCCCCCCGCTCACTCCTCCGCCAGGC
CTTGCAGAATCAATCCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCC
GCAAGAAGTCCCCGCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACT
TGGCTTTTGCCTCTCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGAT
CAACCCGACGGAATCCAATCCCATGCATAGCGCCATCTTTTTGTCTTATC
CTCTGCCTCCAAAGGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCC
AAGGATATTACCTTTGTCTCATTCTACACGATTGTTCTGTCGTTTACTCG
AGAATTCCTGATGCAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGA
TCCGAGGCCGGGGCAAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCG
ATCTACTTTGCCATCTTCGGTCCATTCGGTCTGTACGTCATGAGCCGGTC
GGATATCTGGTACTTCAACACTACGGCCATGTTCGAAGGGTTCCCCCACC
GGGAGCACGAAGGGTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTAC
TGGGCTCAGCAGGCGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAA
GGATTTCAAGGAGCTGGTTGGACACCACATCATCACTCTGGCTCTGATCG
GATTGAGTTATCGCTTCCACTTCACCTACATGGGTATCGCCGTCTACATC
ACGCACGACATCTCTGACTTCTTCCTTGCTGTGAGTGATCCGATTCGAAG
TCCACACTTTTTCTGTTCTTCATGCTGATCGAGTTGCCGTGCAGACCTCC
AAGACCTTGAACTACCTCGACCACATCATCACTGTCCCTTACTTTGGTAT
GTTTGTGGGCATGTGGATCTACCTTCGCCACTATCTGAACCTTAAGATCC
TCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGACCTTTTGAGCTGAAC
TGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAGTACATCACTTTTGC
CCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTCTGGCTCTTCCTGATCC
TGCGCATCCTGAAGAACTACATTTTCAACAGCATCAAGAAGGACGAGAGA
AGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCCCTGTGCCGGACACGGA
CACCCACGCGACCCTTGCGACCGGCGTCGAGGGAGCCACCGTGACTGCAC
GTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAGCCCGTC
AACTCCAAGAACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:306108..307572+ >CAN33_22300-T1 ID=CAN33_22300-T1|Name=CAN33_22300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4680bp|location=Sequence derived from alignment at NKJJ01000002.1:306108..307572+ (Aspergillus niger FDAARGOS_311)
ATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGGACATTCGGGG
AGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTCAGCCCCATTG
AACCCGAGGCTCCTAAATGGGACAAGGCCTTGCAGAATCAATCCGCCGAT
AAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCGTCG
CTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCATGC
TCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCAATCCC
ATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCCCGG
TGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCTCAT
TCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGCCTT
ATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGACTGC
CCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCGGTC
CATTCGGTCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCAACACT
ACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTTCAA
GGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTGTCC
TGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTTGGA
CACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCACTT
CACCTACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGACTTCT
TCCTTGCTACCTCCAAGACCTTGAACTACCTCGACCACATCATCACTGTC
CCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTATCT
GAACCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGAC
CTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAG
TACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGGAGCCACCGTGAC
TGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAGC
CCGTCAACTCCAAGAACTGAATGGCTCGTGTACGGAGAAGGTCGAGTAAC
CTGGGGGCGGACATTCGGGGAGACACCACCGCTCCCGCCATGTCCACCAT
GAACGAAGTCAGCCCCATTGAACCCGAGGCTCCTAAATGGGACAAGGCCT
TGCAGAATCAATCCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCCGC
AAGAAGTCCCCGCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACTTG
GCTTTTGCCTCTCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGATCA
ACCCGACGGAATCCAATCCCATGCATAGCGCCATCTTTTTGTCTTATCCT
CTGCCTCCAAAGGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCCAA
GGATATTACCTTTGTCTCATTCTACACGATTGTTCTGTCGTTTACTCGAG
AATTCCTGATGCAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGATC
CGAGGCCGGGGCAAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCGAT
CTACTTTGCCATCTTCGGTCCATTCGGTCTGTACGTCATGAGCCGGTCGG
ATATCTGGTACTTCAACACTACGGCCATGTTCGAAGGGTTCCCCCACCGG
GAGCACGAAGGGTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTACTG
GGCTCAGCAGGCGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGG
ATTTCAAGGAGCTGGTTGGACACCACATCATCACTCTGGCTCTGATCGGA
TTGAGTTATCGCTTCCACTTCACCTACATGGGTATCGCCGTCTACATCAC
GCACGACATCTCTGACTTCTTCCTTGCTACCTCCAAGACCTTGAACTACC
TCGACCACATCATCACTGTCCCTTACTTTGGTATGTTTGTGGGCATGTGG
ATCTACCTTCGCCACTATCTGAACCTTAAGATCCTCTGGGCTGTGTTGAC
CGAGTTCCGCACGGTCGGACCTTTTGAGCTGAACTGGGAGACTCAACAGT
ACAAGTGCTGGATCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGTCTG
CAAGCCGGAGCCACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCA
GGTGCTGGTCAACGGCAAGCCCGTCAACTCCAAGAACTGAATGGCTCGTG
TACGGAGAAGGTCGAGTAACCTGGGGGCGGACATTCGGGGAGACACCACC
GCTCCCGCCATGTCCACCATGAACGAAGTCAGCCCCATTGAACCCGAGGC
TCCTAAATGGGACAAGGCCTTGCAGAATCAATCCGCCGATAAACTCTCCA
AGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCGTCGCTTCAAGGAT
GTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCATGCTCATCGTTCT
TCTGTCGCTGTACGCGATCAACCCGACGGAATCCAATCCCATGCATAGCG
CCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCCCGGTGGTCCGATC
ATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCTCATTCTACACGAT
TGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGCCTTATTCGGCCTT
TCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGACTGCCCGTTTCATG
GAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCGGTCCATTCGGTCT
GTACGTCATGAGCCGGTCGGATATCTGGTACTTCAACACTACGGCCATGT
TCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTTCAAGGCATTCTAT
CTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTGTCCTGATGTTGCA
GTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTTGGACACCACATCA
TCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCACTTCACCTACATG
GGTATCGCCGTCTACATCACGCACGACATCTCTGACTTCTTCCTTGCTAC
CTCCAAGACCTTGAACTACCTCGACCACATCATCACTGTCCCTTACTTTG
GTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTATCTGAACCTTAAG
ATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGACCTTTTGAGCT
GAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAGTACATCACTT
TTGCCCTGTTGGCCAGTCTGCAAGCCGGAGCCACCGTGACTGCACGTGGC
AAGGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAGCCCGTCAACTC
CAAGAACTGAATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGG
ACATTCGGGGAGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTC
AGCCCCATTGAACCCGAGGCTCCTAAATGGGACAAGGCCTTGCAGAATCA
ATCCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCC
CGCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCT
CTCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGA
ATCCAATCCCATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAA
AGGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACC
TTTGTCTCATTCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGAT
GCAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGG
GCAAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCC
ATCTTCGGTCCATTCGGTCTGTACGTCATGAGCCGGTCGGATATCTGGTA
CTTCAACACTACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAG
GGTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAG
GCGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGA
GCTGGTTGGACACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATC
GCTTCCACTTCACCTACATGGGTATCGCCGTCTACATCACGCACGACATC
TCTGACTTCTTCCTTGCTACCTCCAAGACCTTGAACTACCTCGACCACAT
CATCACTGTCCCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTC
GCCACTATCTGAACCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGC
ACGGTCGGACCTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTG
GATCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGGAG
CCACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTC
AACGGCAAGCCCGTCAACTCCAAGAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013599 |
| DBxref | InterPro:IPR016439 |
| DBxref | InterPro:IPR006634 |
| DBxref | PFAM:PF03798 |
| DBxref | PFAM:PF08390 |
| Product | TLC domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:306108..307572 + |
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