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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:341729..342260- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22355-T1 ID=CAN33_22355-T1|Name=CAN33_22355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=532bp|location=Sequence derived from alignment at NKJJ01000002.1:341729..342260- (Aspergillus niger FDAARGOS_311)
ATGACTGTTATTGCTCCCGCTGAATGGAAGGTGGGCCAGTTCCAGCCGTG
CTCGAGCGTGGACGGAGATATGGAGAAGTGATCTACCATACCCGGAACGT
AATGGCCTACTACTACGCTGGCTGGGTAAGTACCTATTCTTTCCACCAAG
CTAACGGTTTTGATGACCCATCCATTTCAAACAGCACTCCTTTCAATACC
GAACAGGCTGTCCAGCAATGTATCGATGCTGGAGTGATTGCTGATAAGAT
TGTCTGCGTTATGCCCTTGTACGGGCGATCTTTCATCGGTACTGATGGAC
TGGGAAAGCCGTTCACCGGTGTCGGGAACGGATCCTGGGAAGCAGGGGTC
CGGGACTACAAGGATCTGCCGCACCATGGTGTCAAAGAATATGTGCTCGA
CCGTGCAATTGCAAGCTATAGCTATGATCTGACCGTGAGGATGTTGACTA
GATATACCCCGCGATCCATGGGGCAAAAGGTTCACTATATCGCTTCAAGG
GGCTTGGGCGGGGTGATGTGGTGGGAGAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:341729..342260- >CAN33_22355-T1 ID=CAN33_22355-T1|Name=CAN33_22355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1125bp|location=Sequence derived from alignment at NKJJ01000002.1:341729..342260- (Aspergillus niger FDAARGOS_311)
TAGCACTCCTTTCAATACCGAACAGGCTGTCCAGCAATGTATCGATGCTG
GAGTGATTGCTGATAAGATTGTCTGCGTTATGCCCTTGTACGGGCGATCT
TTCATCGGTACTGATGGACTGGGAAAGCCGTTCACCGGTGTCGGGAACGG
ATCCTGGGAAGCAGGGGTCCGGGACTACAAGGATCTGCCGCACCATGGTG
TCAAAGAATATGTGCTCGACCGTGCAATTGCAAGCTATAGCTATGATCTG
ACCGTGAGGATGTTGACTAGATATACCCCGCGATCCATGGGGCAAAAGAT
GACTGTTATTGCTCCCGCTGAATGGAAGGTGGGCCAGTTCCAGCCGTGCT
CGAGCGTGGACGGAGATATGGAGAATAGCACTCCTTTCAATACCGAACAG
GCTGTCCAGCAATGTATCGATGCTGGAGTGATTGCTGATAAGATTGTCTG
CGTTATGCCCTTGTACGGGCGATCTTTCATCGGTACTGATGGACTGGGAA
AGCCGTTCACCGGTGTCGGGAACGGATCCTGGGAAGCAGGGGTCCGGGAC
TACAAGGATCTGCCGCACCATGGTGTCAAAGAATATGTGCTCGACCGTGC
AATTGCAAGCTATAGCTATGATCTGACCGTGAGGATGTTGACTAGATATA
CCCCGCGATCCATGGGGCAAAAGATGACTGTTATTGCTCCCGCTGAATGG
AAGGTGGGCCAGTTCCAGCCGTGCTCGAGCGTGGACGGAGATATGGAGAA
TAGCACTCCTTTCAATACCGAACAGGCTGTCCAGCAATGTATCGATGCTG
GAGTGATTGCTGATAAGATTGTCTGCGTTATGCCCTTGTACGGGCGATCT
TTCATCGGTACTGATGGACTGGGAAAGCCGTTCACCGGTGTCGGGAACGG
ATCCTGGGAAGCAGGGGTCCGGGACTACAAGGATCTGCCGCACCATGGTG
TCAAAGAATATGTGCTCGACCGTGCAATTGCAAGCTATAGCTATGATCTG
ACCGTGAGGATGTTGACTAGATATACCCCGCGATCCATGGGGCAAAAGAT
GACTGTTATTGCTCCCGCTGAATGGAAGGTGGGCCAGTTCCAGCCGTGCT
CGAGCGTGGACGGAGATATGGAGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001223 |
| DBxref | InterPro:IPR029070 |
| Product | Glycosyl hydrolases family 18 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:341729..342260 - |
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