You are here

Home

CAN33_22385-T1, CAN33_22385-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22385-T1
Unique NameCAN33_22385-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:361109..361564-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22385-T1 ID=CAN33_22385-T1|Name=CAN33_22385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=456bp|location=Sequence derived from alignment at NKJJ01000002.1:361109..361564- (Aspergillus niger FDAARGOS_311)
ATGAGGAACGCGATTGATCTGGTTGGCTTCCAAATCCCATAAGTCGTCAA
TCGAAGGACAGGCTATGCTAACGCTACATAGGCCGGCTATACGCTTTCGC
TTCACAATCAGCTTGAAACAGCGAGAGTCGACCGTGAACTGCGCGATTTG
ACCAGCAGCCTAAAGCGCTTGCAGGAGGACAACTTGGATGATAGCGCCGC
AGTCAAAGTAATCACATTCGTGTCGGCAATCTACTTACCAGGCTCTTTCA
TCGTAAGCCTATATGGAATGAATTTCTTCGTCTTCGATGAGGATTCACGC
CAGATTGTCATTGCCAAGGACTTCTGGGTATTTCTCGCCACCTGGCTGCC
GCTGACCCTGGTCACAGGGTTGATATATGTGTTGATTGTATGGTTCGATG
CTTGGTGGAAAAGGAAGCCGTTCCGCTTTTTGAGCGTCCGGGGAAGCGCG
ACGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:361109..361564-

>CAN33_22385-T1 ID=CAN33_22385-T1|Name=CAN33_22385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=792bp|location=Sequence derived from alignment at NKJJ01000002.1:361109..361564- (Aspergillus niger FDAARGOS_311)
GCCGGCTATACGCTTTCGCTTCACAATCAGCTTGAAACAGCGAGAGTCGA
CCGTGAACTGCGCGATTTGACCAGCAGCCTAAAGCGCTTGCAGGAGGACA
ACTTGGATGATAGCGCCGCAGTCAAAGTAATCACATTCGTGTCGGCAATC
TACTTACCAGGCTCTTTCATCGTAAGCCTATATGGAATGAATTTCTTCGT
CTTCGATGAGGATTCACGCCAGATTGTCATTGCCAAGGACTTCTGGGTAT
TTCTCGCCACCTGGCTGCCGCTGACCCTGGTCACAGGGTTGATATATGTG
TTGATTGTATGGTTCGATGCTTGGTGGAAAAGGAAGCCGTTCCGCTTTTT
GAGCGTCCGGGGAAGCGCGACGTGAATGAGGAACGCGATTGATCTGGCCG
GCTATACGCTTTCGCTTCACAATCAGCTTGAAACAGCGAGAGTCGACCGT
GAACTGCGCGATTTGACCAGCAGCCTAAAGCGCTTGCAGGAGGACAACTT
GGATGATAGCGCCGCAGTCAAAGTAATCACATTCGTGTCGGCAATCTACT
TACCAGGCTCTTTCATCGTAAGCCTATATGGAATGAATTTCTTCGTCTTC
GATGAGGATTCACGCCAGATTGTCATTGCCAAGGACTTCTGGGTATTTCT
CGCCACCTGGCTGCCGCTGACCCTGGTCACAGGGTTGATATATGTGTTGA
TTGTATGGTTCGATGCTTGGTGGAAAAGGAAGCCGTTCCGCTTTTTGAGC
GTCCGGGGAAGCGCGACGTGAATGAGGAACGCGATTGATCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22385CAN33_22385Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22385-T1CAN33_22385-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22385-T1.cdsCAN33_22385-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22385-T1.exon2CAN33_22385-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22385-T1.exon1CAN33_22385-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR002523
ProductCorA-like Mg2 transporter protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:361109..361564 -
Powered by Drupal