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CAN33_22435-T1, CAN33_22435-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22435-T1
Unique NameCAN33_22435-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:386118..388193+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22435-T1 ID=CAN33_22435-T1|Name=CAN33_22435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2076bp|location=Sequence derived from alignment at NKJJ01000002.1:386118..388193+ (Aspergillus niger FDAARGOS_311)
ATGCCTCCCAAAGTAGCCATCCTCGATGACTACCAAAACATCTCTCCCCG
GCACTTTGCCCACCTGACCTCCCGCGTTGACATCAGCTACTTCCCCGACA
CACTCAACCCGCGCGACCCCGCCCAACACAAGCAACTCATCCAGCGCCTG
TACCCATTCGAGATCATTGTCACCCAGCGCGAACGCACCCCCTTTTCCAA
GGAGACACTATCCGCGCTACCTAACCTTAAGCTCCTCCTCACCACCGGCA
CGCGCAACCTCGCCCTAGACGCTGCCTACTGCGCGGAGCGGGGCATCCCC
GTCGCAGGCACAAAGTACCGCCTCACCGGTGTCCACTCCACAGTGCAACA
CACGTGGGCACTGATCCTCGGAGCAGCGCGACATATTGCACGTGACGATG
CAGCCATAAAACGCGGCGAATGGCAGGGATCACTTGGTCTGTCGCTGGCG
GGCAGAACGCTCGGGTTGCTCGGTGTCGGGAAGCTCGGGGCGCAGGTGGG
GCGGGTAGCAGTCCAGGCATTCGGGATGAAGGTGATTGCCTGGTCGACGA
ACCTGACGCAGGAAAAGGCAGATGAGCAGGCAGAGGCGATGGGATTACCT
GCAGGTAGCTTTGAGGCTATTCCTCAGAAGTTGGAATTCTTCCGGCAGGC
GGATGTGGTGAGTTTGCATAATGTGTTGTCGGAGCGGAGTCGGGGGATCG
TGGGGCGGGAGGAGCTCGGAGCCATGAAGAAGTCGGCCCTCCTTGTGAAC
ACGTCACGCGGCCCGTTGGTGGAGGAGACGGCGTTGCTCGAGACGTTAAA
CCGGGGTGGGATTGCCGCGGCGGCGTTGGATGTGTTTGAGACCGAGCCGT
TGCCGGGGGATAGTCCGTGGAGAACGACGGCGTGGGGAAGGACGGGCGGA
GTGAGGTGCTCTTGACGCCGCATATGGGATATGTGGATGAACAGATCCAT
GGATGGTATGAAGAGGTGGCGCAGAACCTGGAACGGTGGTTGAATGGACA
GGAGTTTACGGTGCGGTTGAATTGAGTTTGGCTGATTCTGGTCGTCTTTG
TTGGATGTTCAATAGGAGCGGGGATGTGTGGAATGGCGTGGAATGATGTC
GATAATTAAAACTGCTAACTACCTATCTACTTTATTGAGCCCAAAAATTA
GACTAGGAAACTCATGCACGCATCAAGAATAGGACTGCACTCTAATGCAG
GCCACCAAGTACTATTACGTGATGAACCTCGGCTGATCCACCAGATAACC
ATAAACAAGGTGCCTGTTCCGTGATCATTCCCGCCCTCCCACTGTAAGCT
CCATGACTCTGCCAATAGTCCTGCGTCACCATCTGCTGCCAGATCCACTC
GTCCGCAGACATCCTCGGCCGGTGCAATATGCTTGAGATCCTTTACGCCG
ATACTTAAGTAGGGGAGGATTTGCCCGTCCTTAGTCCCAGGGACGCTCTC
ACTTCTTTCCTACCTACCTGCCTATCTACCTACAATACAACCTACATTAC
TACTACAGTCACTTCTATTCCTCCATCTACCTCTCCTCCAACATGTCAAC
CACAATGACAACCACAACCACCACCACCACAGCAACAACACAAGAACCCA
CCCCCTCCCACCCCACCCTAATCCAAGTCAACCGCAGCCCGATCCCTTTC
GCCAGCGGCGCATACAGTCTCGTCTCCGCACCCGCCGGCTCCGTCCTATG
CAAAATCACCGGAACCACCCCGTCCAAGAAAGCCTACACATCCGTGCAAA
CTGGACGAGACAGCCACATCGAGCTGAACTCCGACCTCGTGTACTGCAAC
CACTCGTGCGATCCGACGGTCAACTTCGACATGCATAAGATGGAGGTGCG
GGTTGTGGATAATCGCGACTTAAAGGCGGGGGAGCCGTTGACGTTCTTTT
ACCCTTCGACGGAATGGGAGATGGATCAGCCGTTTGAGTGCACGTGTGGC
AGTGGGGAGAAATGTAAGGGACAGATTGATGGGGCGAAGAATTTGAGTAC
GGAGGTGTTAGGCGAGTATTGGTTAAATCCGCATATTGAGGAGATGGTGG
CTGAGAGGGAGGCGGGGAATCAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:386118..388193+

>CAN33_22435-T1 ID=CAN33_22435-T1|Name=CAN33_22435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2622bp|location=Sequence derived from alignment at NKJJ01000002.1:386118..388193+ (Aspergillus niger FDAARGOS_311)
ATGCCTCCCAAAGTAGCCATCCTCGATGACTACCAAAACATCTCTCCCCG
GCACTTTGCCCACCTGACCTCCCGCGTTGACATCAGCTACTTCCCCGACA
CACTCAACCCGCGCGACCCCGCCCAACACAAGCAACTCATCCAGCGCCTG
TACCCATTCGAGATCATTGTCACCCAGCGCGAACGCACCCCCTTTTCCAA
GGAGACACTATCCGCGCTACCTAACCTTAAGCTCCTCCTCACCACCGGCA
CGCGCAACCTCGCCCTAGACGCTGCCTACTGCGCGGAGCGGGGCATCCCC
GTCGCAGGCACAAAGTACCGCCTCACCGGTGTCCACTCCACAGTGCAACA
CACGTGGGCACTGATCCTCGGAGCAGCGCGACATATTGCACGTGACGATG
CAGCCATAAAACGCGGCGAATGGCAGGGATCACTTGGTCTGTCGCTGGCG
GGCAGAACGCTCGGGTTGCTCGGTGTCGGGAAGCTCGGGGCGCAGGTGGG
GCGGGTAGCAGTCCAGGCATTCGGGATGAAGGTGATTGCCTGGTCGACGA
ACCTGACGCAGGAAAAGGCAGATGAGCAGGCAGAGGCGATGGGATTACCT
GCAGGTAGCTTTGAGGCTATTCCTCAGAAGTTGGAATTCTTCCGGCAGGC
GGATGTGGTGAGTTTGCATAATGTGTTGTCGGAGCGGAGTCGGGGGATCG
TGGGGCGGGAGGAGCTCGGAGCCATGAAGAAGTCGGCCCTCCTTGTGAAC
ACGTCACGCGGCCCGTTGGTGGAGGAGACGGCGTTGCTCGAGACGTTAAA
CCGGGGTGGGATTGCCGCGGCGGCGTTGGATGTGTTTGAGACCGAGCCGT
TGCCGGGGGATATCAACCGCAGCCCGATCCCTTTCGCCAGCGGCGCATAC
AGTCTCGTCTCCGCACCCGCCGGCTCCGTCCTATGCAAAATCACCGGAAC
CACCCCGTCCAAGAAAGCCTACACATCCGTGCAAACTGGACGAGACAGCC
ACATCGAGCTGAACTCCGACCTCGTGTACTGCAACCACTCGTGCGATCCG
ACGGTCAACTTCGACATGCATAAGATGGAGGTGCGGGTTGTGGATAATCG
CGACTTAAAGGCGGGGGAGCCGTTGACGTTCTTTTACCCTTCGACGGAAT
GGGAGATGGATCAGCCGTTTGAGTGCACGTGTGGCAGTGGGGAGAAATGT
AAGGGACAGATTGATGGGGCGAAGAATTTGAGTACGGAGGTGTTAGGCGA
GTATTGGTTAAATCCGCATATTGAGGAGATGGTGGCTGAGAGGGAGGCGG
GGAATCAGTAGATGCCTCCCAAAGTAGCCATCCTCGATGACTACCAAAAC
ATCTCTCCCCGGCACTTTGCCCACCTGACCTCCCGCGTTGACATCAGCTA
CTTCCCCGACACACTCAACCCGCGCGACCCCGCCCAACACAAGCAACTCA
TCCAGCGCCTGTACCCATTCGAGATCATTGTCACCCAGCGCGAACGCACC
CCCTTTTCCAAGGAGACACTATCCGCGCTACCTAACCTTAAGCTCCTCCT
CACCACCGGCACGCGCAACCTCGCCCTAGACGCTGCCTACTGCGCGGAGC
GGGGCATCCCCGTCGCAGGCACAAAGTACCGCCTCACCGGTGTCCACTCC
ACAGTGCAACACACGTGGGCACTGATCCTCGGAGCAGCGCGACATATTGC
ACGTGACGATGCAGCCATAAAACGCGGCGAATGGCAGGGATCACTTGGTC
TGTCGCTGGCGGGCAGAACGCTCGGGTTGCTCGGTGTCGGGAAGCTCGGG
GCGCAGGTGGGGCGGGTAGCAGTCCAGGCATTCGGGATGAAGGTGATTGC
CTGGTCGACGAACCTGACGCAGGAAAAGGCAGATGAGCAGGCAGAGGCGA
TGGGATTACCTGCAGGTAGCTTTGAGGCTATTCCTCAGAAGTTGGAATTC
TTCCGGCAGGCGGATGTGGTGAGTTTGCATAATGTGTTGTCGGAGCGGAG
TCGGGGGATCGTGGGGCGGGAGGAGCTCGGAGCCATGAAGAAGTCGGCCC
TCCTTGTGAACACGTCACGCGGCCCGTTGGTGGAGGAGACGGCGTTGCTC
GAGACGTTAAACCGGGGTGGGATTGCCGCGGCGGCGTTGGATGTGTTTGA
GACCGAGCCGTTGCCGGGGGATATCAACCGCAGCCCGATCCCTTTCGCCA
GCGGCGCATACAGTCTCGTCTCCGCACCCGCCGGCTCCGTCCTATGCAAA
ATCACCGGAACCACCCCGTCCAAGAAAGCCTACACATCCGTGCAAACTGG
ACGAGACAGCCACATCGAGCTGAACTCCGACCTCGTGTACTGCAACCACT
CGTGCGATCCGACGGTCAACTTCGACATGCATAAGATGGAGGTGCGGGTT
GTGGATAATCGCGACTTAAAGGCGGGGGAGCCGTTGACGTTCTTTTACCC
TTCGACGGAATGGGAGATGGATCAGCCGTTTGAGTGCACGTGTGGCAGTG
GGGAGAAATGTAAGGGACAGATTGATGGGGCGAAGAATTTGAGTACGGAG
GTGTTAGGCGAGTATTGGTTAAATCCGCATATTGAGGAGATGGTGGCTGA
GAGGGAGGCGGGGAATCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22435CAN33_22435Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22435-T1.exon1CAN33_22435-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_22435-T1.exon2CAN33_22435-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22435-T1.cdsCAN33_22435-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22435-T1CAN33_22435-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029753
DBxrefInterPro:IPR006140
DBxrefInterPro:IPR006139
DBxrefInterPro:IPR001214
DBxrefPFAM:PF02826
DBxrefPFAM:PF00389
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:386118..388193 +
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