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CAN33_22500-T1, CAN33_22500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22500-T1
Unique NameCAN33_22500-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:438424..439483+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22500-T1 ID=CAN33_22500-T1|Name=CAN33_22500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1060bp|location=Sequence derived from alignment at NKJJ01000002.1:438424..439483+ (Aspergillus niger FDAARGOS_311)
ATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCAT
CAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCC
AGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTC
GCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTT
CCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTG
GTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGAC
CTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTTCGTCCTCCAT
ATAATTCTCCACATAGTTCGCCAGATGGGTCAACATACTAACTCTCCATA
GGTGGTGGTGCCTGGCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCG
TCGTCCCGCCGAGGTCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAG
ACCTAGCGAACCCCAACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACC
TCGACCCTGTTGTCCAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAA
CGCCACCAGCGTGGAGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACC
CCAAGGAAGTCCGCATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACA
CTCCACCACGACGACCACTCCTGCATGGACCCTAACACCATCAACGCTCC
CGTGATCATCAGTACCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGG
CCAAGAGACTCGTCTCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGC
GGCTTGGACATGAACTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGA
GGTCACCAAGGGTTTGATCATCGGTGGTATGGAGCTGTCGGAGATCGATG
GCTTCAACCGCATGGGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTC
AAGGCTGCCGAGGAGGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTG
CGCTGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:438424..439483+

>CAN33_22500-T1 ID=CAN33_22500-T1|Name=CAN33_22500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1992bp|location=Sequence derived from alignment at NKJJ01000002.1:438424..439483+ (Aspergillus niger FDAARGOS_311)
ATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCAT
CAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCC
AGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTC
GCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTT
CCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTG
GTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGAC
CTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGGTGGTGCCTG
GCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGG
TCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCC
AACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTC
CAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGG
AGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGC
ATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGA
CCACTCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTA
CCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTC
TCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAA
CTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTT
TGATCATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATG
GGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGA
GGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAAATGT
CTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCATCAAG
TCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCCAGAC
CCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTCGCTC
CCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTTCCAG
GATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTGGTTC
CTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGACCTGA
AGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGGTGGTGCCTGGCTT
GGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGGTCTT
CCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCCAACT
ACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTCCAAG
GTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGGAGGA
CCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGCATTG
CCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGACCAC
TCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTACCAC
CGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTCTCCA
TGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAACTCG
GCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTTTGAT
CATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATGGGTC
CTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGAGGCG
CTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009228thiamine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22500CAN33_22500Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22500-T1.exon1CAN33_22500-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_22500-T1.exon2CAN33_22500-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22500-T1.cdsCAN33_22500-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22500-T1CAN33_22500-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027495
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002922
DBxrefPFAM:PF01946
DBxrefPFAM:PF13450
ProductThi4 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:438424..439483 +
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