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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:546179..547155- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22645-T1 ID=CAN33_22645-T1|Name=CAN33_22645-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=977bp|location=Sequence derived from alignment at NKJJ01000002.1:546179..547155- (Aspergillus niger FDAARGOS_311)
ATGGCAGATAACAAGCGCCACAGTGTGGGAGTAAGAACATCTGCACAGGG
ATCGTCTGGCGCAACTGCAGGCCAGGGAATGGCTGGTGCCATGGTGCCTT
TGGAGGTGGCACTGAGCCGTGCAATTGGCGCACGGTAAGCCTCGACCTAT
GATAGCACTGCTGAGCAGAATTTCCATTTGTGCAGCAAGCACTAGCACCT
GTATTCCTTTGCCAGAATGCCTCTGGACGAATGCCTACAGGGATTTCAAG
GTTCATACTGACGTTGTTGTGTTGTACAGTGTTCGTATCAGTACATCTCC
GGTTGCCTCCACCATTGAGGGGACTCTGTTCACAGCCTGTCCGATCACGA
ACCTCGTTGCCATCAATATTGCCGAAGAAGGCAAGTCACAGACCGGCGAT
TACCATGTCATCCCCGTGTCGCGCATACAATCTTTCCAAGTTCTCTCTCT
GCCTCCGTCCAGCACCGATGGGGCTCCTTTCTCTGATGCCGTGCCGCCTT
TGCACGCACTTGATATTCGTGCTCTGAAGGCGCGGGAGGCTGCTGCTGTC
GGCAAGCTGCAGGAAGGTGAAGCACGGCGAGGCAAGGGAGTCACCAAGGA
GGCACAGGATCTCTTTGACGCATTCAGTCGCACAATGCCGGCCAGGTGGG
ATGGAACCAAGATTATTGTAGCCGATGCTGTCTCCATTGCGGCCCCTTAC
CGCCCAGATGACTGCAGGCCGCTCGTGGCGGGTGACACGGCTGCTCTTTC
TCGAGTACGCATGGTGGTAAGTTGGCCTTATACCGACGAGACGGGATACA
TCTGACATTTGGATAGCTCGAGATGGAGCGCAAGAAGATCGAACTGCGCA
ACGCGAGTGCAACTATTGGTACAGTCTACCCACCCATCCATCTACAGACG
GACTCGCTCGATGAAACATGGCGACTAACCATCTAATTTCAGGGGCCGGT
GCTGCTGGACAACGTAAAGGAGGCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:546179..547155- >CAN33_22645-T1 ID=CAN33_22645-T1|Name=CAN33_22645-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2832bp|location=Sequence derived from alignment at NKJJ01000002.1:546179..547155- (Aspergillus niger FDAARGOS_311)
GGGCCGGTGCTGCTGGACAACGTAAAGGAGGCTGACTCGAGATGGAGCGC
AAGAAGATCGAACTGCGCAACGCGAGTGCAACTATTGTGTTCGTATCAGT
ACATCTCCGGTTGCCTCCACCATTGAGGGGACTCTGTTCACAGCCTGTCC
GATCACGAACCTCGTTGCCATCAATATTGCCGAAGAAGGCAAGTCACAGA
CCGGCGATTACCATGTCATCCCCGTGTCGCGCATACAATCTTTCCAAGTT
CTCTCTCTGCCTCCGTCCAGCACCGATGGGGCTCCTTTCTCTGATGCCGT
GCCGCCTTTGCACGCACTTGATATTCGTGCTCTGAAGGCGCGGGAGGCTG
CTGCTGTCGGCAAGCTGCAGGAAGGTGAAGCACGGCGAGGCAAGGGAGTC
ACCAAGGAGGCACAGGATCTCTTTGACGCATTCAGTCGCACAATGCCGGC
CAGGTGGGATGGAACCAAGATTATTGTAGCCGATGCTGTCTCCATTGCGG
CCCCTTACCGCCCAGATGACTGCAGGCCGCTCGTGGCGGGTGACACGGCT
GCTCTTTCTCGAGTACGCATGGTGATGGCAGATAACAAGCGCCACAGTGT
GGGAGTAAGAACATCTGCACAGGGATCGTCTGGCGCAACTGCAGGCCAGG
GAATGGCTGGTGCCATGGTGCCTTTGGAGGTGGCACTGAGCCGTGCAATT
GGCGCACGGGGCCGGTGCTGCTGGACAACGTAAAGGAGGCTGACTCGAGA
TGGAGCGCAAGAAGATCGAACTGCGCAACGCGAGTGCAACTATTGTGTTC
GTATCAGTACATCTCCGGTTGCCTCCACCATTGAGGGGACTCTGTTCACA
GCCTGTCCGATCACGAACCTCGTTGCCATCAATATTGCCGAAGAAGGCAA
GTCACAGACCGGCGATTACCATGTCATCCCCGTGTCGCGCATACAATCTT
TCCAAGTTCTCTCTCTGCCTCCGTCCAGCACCGATGGGGCTCCTTTCTCT
GATGCCGTGCCGCCTTTGCACGCACTTGATATTCGTGCTCTGAAGGCGCG
GGAGGCTGCTGCTGTCGGCAAGCTGCAGGAAGGTGAAGCACGGCGAGGCA
AGGGAGTCACCAAGGAGGCACAGGATCTCTTTGACGCATTCAGTCGCACA
ATGCCGGCCAGGTGGGATGGAACCAAGATTATTGTAGCCGATGCTGTCTC
CATTGCGGCCCCTTACCGCCCAGATGACTGCAGGCCGCTCGTGGCGGGTG
ACACGGCTGCTCTTTCTCGAGTACGCATGGTGATGGCAGATAACAAGCGC
CACAGTGTGGGAGTAAGAACATCTGCACAGGGATCGTCTGGCGCAACTGC
AGGCCAGGGAATGGCTGGTGCCATGGTGCCTTTGGAGGTGGCACTGAGCC
GTGCAATTGGCGCACGGGGCCGGTGCTGCTGGACAACGTAAAGGAGGCTG
ACTCGAGATGGAGCGCAAGAAGATCGAACTGCGCAACGCGAGTGCAACTA
TTGTGTTCGTATCAGTACATCTCCGGTTGCCTCCACCATTGAGGGGACTC
TGTTCACAGCCTGTCCGATCACGAACCTCGTTGCCATCAATATTGCCGAA
GAAGGCAAGTCACAGACCGGCGATTACCATGTCATCCCCGTGTCGCGCAT
ACAATCTTTCCAAGTTCTCTCTCTGCCTCCGTCCAGCACCGATGGGGCTC
CTTTCTCTGATGCCGTGCCGCCTTTGCACGCACTTGATATTCGTGCTCTG
AAGGCGCGGGAGGCTGCTGCTGTCGGCAAGCTGCAGGAAGGTGAAGCACG
GCGAGGCAAGGGAGTCACCAAGGAGGCACAGGATCTCTTTGACGCATTCA
GTCGCACAATGCCGGCCAGGTGGGATGGAACCAAGATTATTGTAGCCGAT
GCTGTCTCCATTGCGGCCCCTTACCGCCCAGATGACTGCAGGCCGCTCGT
GGCGGGTGACACGGCTGCTCTTTCTCGAGTACGCATGGTGATGGCAGATA
ACAAGCGCCACAGTGTGGGAGTAAGAACATCTGCACAGGGATCGTCTGGC
GCAACTGCAGGCCAGGGAATGGCTGGTGCCATGGTGCCTTTGGAGGTGGC
ACTGAGCCGTGCAATTGGCGCACGGGGCCGGTGCTGCTGGACAACGTAAA
GGAGGCTGACTCGAGATGGAGCGCAAGAAGATCGAACTGCGCAACGCGAG
TGCAACTATTGTGTTCGTATCAGTACATCTCCGGTTGCCTCCACCATTGA
GGGGACTCTGTTCACAGCCTGTCCGATCACGAACCTCGTTGCCATCAATA
TTGCCGAAGAAGGCAAGTCACAGACCGGCGATTACCATGTCATCCCCGTG
TCGCGCATACAATCTTTCCAAGTTCTCTCTCTGCCTCCGTCCAGCACCGA
TGGGGCTCCTTTCTCTGATGCCGTGCCGCCTTTGCACGCACTTGATATTC
GTGCTCTGAAGGCGCGGGAGGCTGCTGCTGTCGGCAAGCTGCAGGAAGGT
GAAGCACGGCGAGGCAAGGGAGTCACCAAGGAGGCACAGGATCTCTTTGA
CGCATTCAGTCGCACAATGCCGGCCAGGTGGGATGGAACCAAGATTATTG
TAGCCGATGCTGTCTCCATTGCGGCCCCTTACCGCCCAGATGACTGCAGG
CCGCTCGTGGCGGGTGACACGGCTGCTCTTTCTCGAGTACGCATGGTGAT
GGCAGATAACAAGCGCCACAGTGTGGGAGTAAGAACATCTGCACAGGGAT
CGTCTGGCGCAACTGCAGGCCAGGGAATGGCTGGTGCCATGGTGCCTTTG
GAGGTGGCACTGAGCCGTGCAATTGGCGCACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR019181 |
| DBxref | PFAM:PF09793 |
| Product | Anticodon-binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:546179..547155 - |
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