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CAN33_22750-T1, CAN33_22750-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22750-T1
Unique NameCAN33_22750-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:626951..629058-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22750-T1 ID=CAN33_22750-T1|Name=CAN33_22750-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2108bp|location=Sequence derived from alignment at NKJJ01000002.1:626951..629058- (Aspergillus niger FDAARGOS_311)
ATGGTTCTTATAGCGCCCATCGTGAATGGAATTTTGATCGTATCTCTGGA
GAAGTTTCTTCCGATCAGTCCGTCGCCTGCCCTCACCTTGTTAGTATGGG
GCAAATTTATAGTTGAAACGTAATGCAGGTGAGTGCTTTGAAGAAAGGAT
AATGCCACCCTGTCGCTTAGACCAGAGCTAGCATTATCAGTTGACAGGCT
TTGGCGCGCCTGCTTGCAACCACTATCGCCATGTTGCTGATGCTGCCGCC
CAAGTGTCCACCGGGTATTTATTTTCGAGTAACAGACACGTGACGTAATT
GCCTAAAGGGGAAGAAATGAGCGTTACTGCTGGACATCACGGTTTGGATC
AAACTTATCTGAAGTACTCCGTCCTTAAGTTGATTCTAACCTTATTTCTG
CATTAGTTTCGCATAAATTCGCTAGTCTTCATATTGAATAATCAAGCCCC
TCACCTGCACCCTTTATATTTGATTGGACTTCCTCACGCGTGGAACACGT
GAACACGTGATAACGTGTTTCTGTATACCTGCGGGTCTACAACTTGAAAC
GTTCGCGCTGTTGACCTGACGATTATAATGACTGGAACGAGCACTACAGG
AGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGC
AGTTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTA
ATCGAGGTACTACAACTATACATGGCTTTTAAGAACGCGTGACTAATTTA
TCTATGGAAAAACGGCGGTACTATACGGCTGCTGGAGAAGGATGCAGATA
TCAGATTGGTTGATCATAAGAGAAAGAACTTACCCTCTGACACGTGAGGT
TTCCTGCCATTTCCATCCTTGACTCACTTGTGTAATCGCATCGCTGGAAA
ACAGCGCACACTGTTTTAGCCTTCTACCATCCAGTGGACACTTACAGGAT
ATAGGTACTCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTG
CAGAATCTAGAGAATTATAGAGCCGGGCCTTCTGAAGCACGGCCCGTAGG
GGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAG
ATGACCAGTTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAG
GCTTCCATTAGAGGCAACAAAATCTATCAAGAGCTAGCCGAGAAGGTATC
GAGAACCCCCTCTGAGCTGTGAAATGCAGGCATACTAAGCGTCATCCCAC
TAGCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAG
GCTCAAGGGACATCCACGTCCTGGTGGTATGCCAGAATCAACTGATCAAC
CTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTCCAGTCTGAG
CCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAA
TGACAAGAAAAGGAAACGGGCTTCGGAGGATACTCCTGGGGAAGGCAATG
TAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACCGAAGTCAAT
ATCGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGC
AGTACCACATTCAGCGACAGCATCCAACGGTCAGCGACCAACTCCTGGGG
CAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAAGCTCCAGCC
AAGGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCC
ATTTTTGCCTTCTGACGATGAGCCTGAAGAGGAAGATATGGAGCAGGATA
TCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCTCAGCATGAA
GAACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGC
TGACAGGGTCCTGGCTATCCTAGTAGAAGGAAAACCTATACCGGATGATA
TGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAAGGAAACGAG
ACTCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAA
CAATCGCTGGGAGTACCTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATA
CCCTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:626951..629058-

>CAN33_22750-T1 ID=CAN33_22750-T1|Name=CAN33_22750-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3555bp|location=Sequence derived from alignment at NKJJ01000002.1:626951..629058- (Aspergillus niger FDAARGOS_311)
CATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCT
CAAGGGACATCCACGTCCTGGTGGTATGCCAGAATCAACTGATCAACCTG
CGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTCCAGTCTGAGCCT
CGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGA
CAAGAAAAGGAAACGGGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAG
ACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACCGAAGTCAATATC
GACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGT
ACCACATTCAGCGACAGCATCCAACGGTCAGCGACCAACTCCTGGGGCAA
AAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAAGCTCCAGCCAAG
GAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATT
TTTGCCTTCTGACGATGAGCCTGAAGAGGAAGATATGGAGCAGGATATCG
ACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCTCAGCATGAAGAA
CAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGA
CAGGGTCCTGGCTATCCTAGTAGAAGGAAAACCTATACCGGATGATATGC
CTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAAGGAAACGAGACT
CGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAA
TCGCTGGGAGTACCTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCC
TTTGAGTACTCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCT
GCAGAATCTAGAGAATTATAGAGCCGGGCCTTCTGAAGCACGGCCCGTAG
GGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAA
GATGACCAGTTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAA
GGCTTCCATTAGAGGCAACAAAATCTATCAAGAGCTAGCCGAGAAGATGG
TTCTTATAGCGCCCATCGTGAATGGAATTTTGATCGTATCTCTGGAGAAG
TTTCTTCCGATCAGTCCGTCGCCTGCCCTCACCTTCATCCAAGGCACACG
TATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCACG
TCCTGGTGGTATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCT
CCAATTTAGCTACTCGCCTGGTCCAGTCTGAGCCTCGAGGAGGGTCTGCA
CAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAACG
GGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGC
CAAGTTTGAAGAAAAGAGTCACCGAAGTCAATATCGACCTTCCAGACCCT
TTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCGAC
AGCATCCAACGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAAC
GCGGGGCCACTGAAGGATCGAAAGCTCCAGCCAAGGAGCCACGCCAGCCT
TCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGACGA
TGAGCCTGAAGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACG
AGCGACTTCTTAACGGAAAGGCTCAGCATGAAGAACAAATACACCTGGCA
CTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCTAT
CCTAGTAGAAGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACAC
CTGAAGATGACAAATGCATAGAAGGAAACGAGACTCGAGGCATCCAACGA
GTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTACCT
CAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCCTTTGAGTACTCTTTC
AAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAA
TTATAGAGCCGGGCCTTCTGAAGCACGGCCCGTAGGGGCTACCAACATTC
CCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGATGACCAGTTGCTC
TGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGG
CAACAAAATCTATCAAGAGCTAGCCGAGAAGATGGTTCTTATAGCGCCCA
TCGTGAATGGAATTTTGATCGTATCTCTGGAGAAGTTTCTTCCGATCAGT
CCGTCGCCTGCCCTCACCTTCATCCAAGGCACACGTATCAATCATATCGA
GATCGGTACCTCAAAAGGCTCAAGGGACATCCACGTCCTGGTGGTATGCC
AGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTC
GCCTGGTCCAGTCTGAGCCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCT
ACTGCCATGCAAGCAAATGACAAGAAAAGGAAACGGGCTTCGGAGGATAC
TCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAA
GAGTCACCGAAGTCAATATCGACCTTCCAGACCCTTTCATCTCCGGACCT
CAAACGAAACTGGCTGCAGTACCACATTCAGCGACAGCATCCAACGGTCA
GCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAG
GATCGAAAGCTCCAGCCAAGGAGCCACGCCAGCCTTCGCAGCCAGACCCC
CTGTTTCTAGAGCTGCCATTTTTGCCTTCTGACGATGAGCCTGAAGAGGA
AGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACG
GAAAGGCTCAGCATGAAGAACAAATACACCTGGCACTGCGGTGCACCAGC
ATGGATCCAGATTTAGCTGACAGGGTCCTGGCTATCCTAGTAGAAGGAAA
ACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAAT
GCATAGAAGGAAACGAGACTCGAGGCATCCAACGAGTCATGGAGAAGCAT
GGTACGGAGGCCTTCAACAATCGCTGGGAGTACCTCAGCATGGTCAGAGA
GGCCGGTCTTTTAGATACCCTTTGAGTACTCTTTCAAATATGTCGAAGAC
TCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGGCC
TTCTGAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATA
AGATCCCCTATACTCTCGAAGATGACCAGTTGCTCTGGGACTGGATGCAA
CCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTATCA
AGAGCTAGCCGAGAAGATGGTTCTTATAGCGCCCATCGTGAATGGAATTT
TGATCGTATCTCTGGAGAAGTTTCTTCCGATCAGTCCGTCGCCTGCCCTC
ACCTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22750CAN33_22750Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22750-T1CAN33_22750-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22750-T1.cdsCAN33_22750-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22750-T1.exon3CAN33_22750-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_22750-T1.exon2CAN33_22750-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22750-T1.exon1CAN33_22750-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR015010
DBxrefInterPro:IPR038104
DBxrefInterPro:IPR021661
DBxrefPFAM:PF11626
DBxrefPFAM:PF08914
ProductRap1 Myb domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:626951..629058 -
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