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CAN33_22815-T1, CAN33_22815-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22815-T1
Unique NameCAN33_22815-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:659654..660608-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22815-T1 ID=CAN33_22815-T1|Name=CAN33_22815-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=955bp|location=Sequence derived from alignment at NKJJ01000002.1:659654..660608- (Aspergillus niger FDAARGOS_311)
ATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAGGTACACA
CCACTTTTCTTATTCTCATCCCCATACCACACCACCCTCTTCGTCCAGCT
TACCCACAAAATAATCCAGGGATTGGCCTCGCCCTCACCCAAACTCTCCT
GCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCACGA
ACTCTCTCTATACTAACCCCCACCAACATCCCCCACCTCAACCCTCATCC
TCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCATCGAA
ACCCTCAAATCGAAACACAACATCACGCACATCGACACCGTGATTTCCAA
CGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCTCTCT
CTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCGCCTC
TTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGTTTGT
CAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAATTCT
TTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGTGACG
AGGAAAATGCATGTTGAGAACGAGGAGATGGTTTGTTTCATGGTTCATCC
GGGGTGAGCTTACTATCTTGTGCTTAGGAATGGGTTAGGGTACTGATATG
AAATGCGTAGGTTCGTCAAGACTGAGATGGGGAATGCGTGTGCGAAGAGT
ATTGGGTTGGAAGAGGCATTCTCGGAGCCGAAGGAGTGTGCGGAGGCTTT
GGTGAAGTTGGTAAGTCTATATTCGTATTTGTACTTCTTATATATTGGTG
TGATACTGAGTAGACCAGATTGAAAGCGCCACGAGGGAAACAGTTGGAGG
CCGGTTCATCAGTTGGAGAGGGGAAGAGGTTCCTTTCTAATTGGTAGAGA
TATAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:659654..660608-

>CAN33_22815-T1 ID=CAN33_22815-T1|Name=CAN33_22815-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2040bp|location=Sequence derived from alignment at NKJJ01000002.1:659654..660608- (Aspergillus niger FDAARGOS_311)
ATATAGGTTCGTCAAGACTGAGATGGGGAATGCGTGTGCGAAGAGTATTG
GGTTGGAAGAGGCATTCTCGGAGCCGAAGGAGTGTGCGGAGGCTTTGGTG
AAGTTGCCATCGAAACCCTCAAATCGAAACACAACATCACGCACATCGAC
ACCGTGATTTCCAACGCAGGGTACTACAACGACGCCACCCACCGCGTCGA
CAACATCCCTCTCTCTACTGTGCAATCGCACTTGGACGTGAACACGCTTG
GCACAATCCGCCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACG
AAGCCGATGTTTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCT
CGAGGAGGAATTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCA
GTAACTGGGTGACGAGGAAAATGCATGTTGAGAACGAGGAGATGGTTTGT
TTCATGGTTCATCCGGGATGTCATCCCCAACCATCTACCTCATCACCGGG
GCCAGCAGAGATATAGGTTCGTCAAGACTGAGATGGGGAATGCGTGTGCG
AAGAGTATTGGGTTGGAAGAGGCATTCTCGGAGCCGAAGGAGTGTGCGGA
GGCTTTGGTGAAGTTGCCATCGAAACCCTCAAATCGAAACACAACATCAC
GCACATCGACACCGTGATTTCCAACGCAGGGTACTACAACGACGCCACCC
ACCGCGTCGACAACATCCCTCTCTCTACTGTGCAATCGCACTTGGACGTG
AACACGCTTGGCACAATCCGCCTCTTCCAGGGTGTGTATGACATGCTGAA
GAAGAGCACGAAGCCGATGTTTGTCAGTGTTAGTAGCTTCCTGGGGAGTA
TCGGCGGTCTCGAGGAGGAATTCTTTCCCGGGGCTGCATACGGGGTTAGT
AAGGCTGCCAGTAACTGGGTGACGAGGAAAATGCATGTTGAGAACGAGGA
GATGGTTTGTTTCATGGTTCATCCGGGATGTCATCCCCAACCATCTACCT
CATCACCGGGGCCAGCAGAGATATAGGTTCGTCAAGACTGAGATGGGGAA
TGCGTGTGCGAAGAGTATTGGGTTGGAAGAGGCATTCTCGGAGCCGAAGG
AGTGTGCGGAGGCTTTGGTGAAGTTGCCATCGAAACCCTCAAATCGAAAC
ACAACATCACGCACATCGACACCGTGATTTCCAACGCAGGGTACTACAAC
GACGCCACCCACCGCGTCGACAACATCCCTCTCTCTACTGTGCAATCGCA
CTTGGACGTGAACACGCTTGGCACAATCCGCCTCTTCCAGGGTGTGTATG
ACATGCTGAAGAAGAGCACGAAGCCGATGTTTGTCAGTGTTAGTAGCTTC
CTGGGGAGTATCGGCGGTCTCGAGGAGGAATTCTTTCCCGGGGCTGCATA
CGGGGTTAGTAAGGCTGCCAGTAACTGGGTGACGAGGAAAATGCATGTTG
AGAACGAGGAGATGGTTTGTTTCATGGTTCATCCGGGATGTCATCCCCAA
CCATCTACCTCATCACCGGGGCCAGCAGAGATATAGGTTCGTCAAGACTG
AGATGGGGAATGCGTGTGCGAAGAGTATTGGGTTGGAAGAGGCATTCTCG
GAGCCGAAGGAGTGTGCGGAGGCTTTGGTGAAGTTGCCATCGAAACCCTC
AAATCGAAACACAACATCACGCACATCGACACCGTGATTTCCAACGCAGG
GTACTACAACGACGCCACCCACCGCGTCGACAACATCCCTCTCTCTACTG
TGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCGCCTCTTCCAG
GGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGTTTGTCAGTGT
TAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAATTCTTTCCCG
GGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGTGACGAGGAAA
ATGCATGTTGAGAACGAGGAGATGGTTTGTTTCATGGTTCATCCGGGATG
TCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22815CAN33_22815Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22815-T1CAN33_22815-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22815-T1.cdsCAN33_22815-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22815-T1.exon4CAN33_22815-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_22815-T1.exon3CAN33_22815-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_22815-T1.exon2CAN33_22815-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22815-T1.exon1CAN33_22815-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.4
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:659654..660608 -
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