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CAN33_22820-T1, CAN33_22820-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22820-T1
Unique NameCAN33_22820-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:662839..664269+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22820-T1 ID=CAN33_22820-T1|Name=CAN33_22820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1431bp|location=Sequence derived from alignment at NKJJ01000002.1:662839..664269+ (Aspergillus niger FDAARGOS_311)
ATGTCCTACGCCGTTGAAACGAAGAAGCGCAAGTTTCATCGAGTTCTCGA
GTCCCTAACCAAACCGTCAACCTCCGACTCAACAAAATCAGCCACCGCCG
AAGCGCCTACAACAGCTCGAGACGCATCGAACAAGAAAGCCCGTCTAGAT
GCGCCCAACTTCTCACTTGCACGAAATTCACTTCTAAAGGTCGCACGCCC
CAGCTCCAGAGACTCTTCGGTATCGTCAACCTCGCGACCGAGCTTTGTTC
CTTGGGATCGCGAACGTTTTCTCGAGCGATTGGAAACCTTTCGTCGCGTC
GACAGATGGGCACCCAAACCGTCAGCAATTAGTGAGGTAGAATGGGCCAA
GCGCGGCTGGGTATGTACGGATGTGGCCCGGGTAACATGTGCTGGGAACT
GTGGTGGGTCGGTTGTTGTCAAGCTTCCGGATGAGCTGGACGAGTTGGAT
GGGTTCGATGCCGACAAGGTGCAAGAGAGGAAGGAAGTTCGTGAGTTTTC
CAATTGCCGTGTCTGCTTCGTGCTTCTAATGTAAATCAGGAGCCAAGCTT
GTAGATGAATACGTGGAACGACTGGTCAAGGGGCACGGAGAGACTTGTCC
ATGGAGGAACAAGGGCTGTGATGGTGTGTTTTCTGATATTTGTGGTTGCC
ATTTCGTGAGCTGATTGTTACAGCTACTATTCATCGATTGCCGCTAGCAA
ACCCCGACATAGCCATTTCTGGCCTCGAAAAGCGATACTCAAACCTCATC
AAGATGGCCGATCAATTGCCGGCAGCAGACGTCATCCACACGCCCGAGTC
CTTCGATATCGAAGCACTCATTAAGATACTTCCAGCGAGCTTTAACGGCC
CCGGAGAAAGTACGCGCATGGAAAGCATTGAGAACAACACTGAGGGTGAA
AACGGGAAAGAGAACGCACATAACTCTGAGCCTGAGCCGTTTGTTCCTAG
GAACGCTTTCATATTGGCATTCTTCGGCTGGGACTCTGTCCCGGACGGGA
CAGCTGGTTTGGTCGGCTGTAGCGTGTGCTTCCGGAGATTGGGCCTGTGG
ATGTACAAACCAAAGGCCAACGGGGATGAGGCTCTTTACGACTCTTTGGA
AGTGGTGAACGAGCATATGGACTACTGTCCTTGGGTGAATGGGAAGGCTC
AGAGTGGAACAGGACGGGCCACCGAGAAACTAGAAGGCCTACGTTCCGGC
TGGGAGCTGCTGGGCCAGGCACTCAATGTGCGCCATCGTCGACTGAATCG
GTCGACCACCTCGGGAGACAGTCGTGCTGTCTCTGAGGTACCATCCACGG
ATGAGCCCGTGGTGGACGATGTGAACCCAGAAGTTAAAAAGGCCAGTGAC
CGGGAATGGTGGGCCAAGTTACGCCGCATGCGACAGGTCTTGAACGTCAG
TTCGCCTAGGAAGAAGCCGACTTCGCAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:662839..664269+

>CAN33_22820-T1 ID=CAN33_22820-T1|Name=CAN33_22820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3996bp|location=Sequence derived from alignment at NKJJ01000002.1:662839..664269+ (Aspergillus niger FDAARGOS_311)
ATGTCCTACGCCGTTGAAACGAAGAAGCGCAAGTTTCATCGAGTTCTCGA
GTCCCTAACCAAACCGTCAACCTCCGACTCAACAAAATCAGCCACCGCCG
AAGCGCCTACAACAGCTCGAGACGCATCGAACAAGAAAGCCCGTCTAGAT
GCGCCCAACTTCTCACTTGCACGAAATTCACTTCTAAAGGTCGCACGCCC
CAGCTCCAGAGACTCTTCGGTATCGTCAACCTCGCGACCGAGCTTTGTTC
CTTGGGATCGCGAACGTTTTCTCGAGCGATTGGAAACCTTTCGTCGCGTC
GACAGATGGGCACCCAAACCGTCAGCAATTAGTGAGGTAGAATGGGCCAA
GCGCGGCTGGGTATGTACGGATGTGGCCCGGGTAACATGTGCTGGGAACT
GTGGTGGGTCGGTTGTTGTCAAGCTTCCGGATGAGCTGGACGAGTTGGAT
GGGTTCGATGCCGACAAGGTGCAAGAGAGGAAGGAAGTTCGAGCCAAGCT
TGTAGATGAATACGTGGAACGACTGGTCAAGGGGCACGGAGAGACTTGTC
CATGGAGGAACAAGGGCTGTGATGCTACTATTCATCGATTGCCGCTAGCA
AACCCCGACATAGCCATTTCTGGCCTCGAAAAGCGATACTCAAACCTCAT
CAAGATGGCCGATCAATTGCCGGCAGCAGACGTCATCCACACGCCCGAGT
CCTTCGATATCGAAGCACTCATTAAGATACTTCCAGCGAGCTTTAACGGC
CCCGGAGAAAGTACGCGCATGGAAAGCATTGAGAACAACACTGAGGGTGA
AAACGGGAAAGAGAACGCACATAACTCTGAGCCTGAGCCGTTTGTTCCTA
GGAACGCTTTCATATTGGCATTCTTCGGCTGGGACTCTGTCCCGGACGGG
ACAGCTGGTTTGGTCGGCTGTAGCGTGTGCTTCCGGAGATTGGGCCTGTG
GATGTACAAACCAAAGGCCAACGGGGATGAGGCTCTTTACGACTCTTTGG
AAGTGGTGAACGAGCATATGGACTACTGTCCTTGGGTGAATGGGAAGGCT
CAGAGTGGAACAGGACGGGCCACCGAGAAACTAGAAGGCCTACGTTCCGG
CTGGGAGCTGCTGGGCCAGGCACTCAATGTGCGCCATCGTCGACTGAATC
GGTCGACCACCTCGGGAGACAGTCGTGCTGTCTCTGAGGTACCATCCACG
GATGAGCCCGTGGTGGACGATGTGAACCCAGAAGTTAAAAAGGCCAGTGA
CCGGGAATGGTGGGCCAAGTTACGCCGCATGCGACAGGTCTTGAACGTCA
GTTCGCCTAGGAAGAAGCCGACTTCGCAGTGAATGTCCTACGCCGTTGAA
ACGAAGAAGCGCAAGTTTCATCGAGTTCTCGAGTCCCTAACCAAACCGTC
AACCTCCGACTCAACAAAATCAGCCACCGCCGAAGCGCCTACAACAGCTC
GAGACGCATCGAACAAGAAAGCCCGTCTAGATGCGCCCAACTTCTCACTT
GCACGAAATTCACTTCTAAAGGTCGCACGCCCCAGCTCCAGAGACTCTTC
GGTATCGTCAACCTCGCGACCGAGCTTTGTTCCTTGGGATCGCGAACGTT
TTCTCGAGCGATTGGAAACCTTTCGTCGCGTCGACAGATGGGCACCCAAA
CCGTCAGCAATTAGTGAGGTAGAATGGGCCAAGCGCGGCTGGGTATGTAC
GGATGTGGCCCGGGTAACATGTGCTGGGAACTGTGGTGGGTCGGTTGTTG
TCAAGCTTCCGGATGAGCTGGACGAGTTGGATGGGTTCGATGCCGACAAG
GTGCAAGAGAGGAAGGAAGTTCGAGCCAAGCTTGTAGATGAATACGTGGA
ACGACTGGTCAAGGGGCACGGAGAGACTTGTCCATGGAGGAACAAGGGCT
GTGATGCTACTATTCATCGATTGCCGCTAGCAAACCCCGACATAGCCATT
TCTGGCCTCGAAAAGCGATACTCAAACCTCATCAAGATGGCCGATCAATT
GCCGGCAGCAGACGTCATCCACACGCCCGAGTCCTTCGATATCGAAGCAC
TCATTAAGATACTTCCAGCGAGCTTTAACGGCCCCGGAGAAAGTACGCGC
ATGGAAAGCATTGAGAACAACACTGAGGGTGAAAACGGGAAAGAGAACGC
ACATAACTCTGAGCCTGAGCCGTTTGTTCCTAGGAACGCTTTCATATTGG
CATTCTTCGGCTGGGACTCTGTCCCGGACGGGACAGCTGGTTTGGTCGGC
TGTAGCGTGTGCTTCCGGAGATTGGGCCTGTGGATGTACAAACCAAAGGC
CAACGGGGATGAGGCTCTTTACGACTCTTTGGAAGTGGTGAACGAGCATA
TGGACTACTGTCCTTGGGTGAATGGGAAGGCTCAGAGTGGAACAGGACGG
GCCACCGAGAAACTAGAAGGCCTACGTTCCGGCTGGGAGCTGCTGGGCCA
GGCACTCAATGTGCGCCATCGTCGACTGAATCGGTCGACCACCTCGGGAG
ACAGTCGTGCTGTCTCTGAGGTACCATCCACGGATGAGCCCGTGGTGGAC
GATGTGAACCCAGAAGTTAAAAAGGCCAGTGACCGGGAATGGTGGGCCAA
GTTACGCCGCATGCGACAGGTCTTGAACGTCAGTTCGCCTAGGAAGAAGC
CGACTTCGCAGTGAATGTCCTACGCCGTTGAAACGAAGAAGCGCAAGTTT
CATCGAGTTCTCGAGTCCCTAACCAAACCGTCAACCTCCGACTCAACAAA
ATCAGCCACCGCCGAAGCGCCTACAACAGCTCGAGACGCATCGAACAAGA
AAGCCCGTCTAGATGCGCCCAACTTCTCACTTGCACGAAATTCACTTCTA
AAGGTCGCACGCCCCAGCTCCAGAGACTCTTCGGTATCGTCAACCTCGCG
ACCGAGCTTTGTTCCTTGGGATCGCGAACGTTTTCTCGAGCGATTGGAAA
CCTTTCGTCGCGTCGACAGATGGGCACCCAAACCGTCAGCAATTAGTGAG
GTAGAATGGGCCAAGCGCGGCTGGGTATGTACGGATGTGGCCCGGGTAAC
ATGTGCTGGGAACTGTGGTGGGTCGGTTGTTGTCAAGCTTCCGGATGAGC
TGGACGAGTTGGATGGGTTCGATGCCGACAAGGTGCAAGAGAGGAAGGAA
GTTCGAGCCAAGCTTGTAGATGAATACGTGGAACGACTGGTCAAGGGGCA
CGGAGAGACTTGTCCATGGAGGAACAAGGGCTGTGATGCTACTATTCATC
GATTGCCGCTAGCAAACCCCGACATAGCCATTTCTGGCCTCGAAAAGCGA
TACTCAAACCTCATCAAGATGGCCGATCAATTGCCGGCAGCAGACGTCAT
CCACACGCCCGAGTCCTTCGATATCGAAGCACTCATTAAGATACTTCCAG
CGAGCTTTAACGGCCCCGGAGAAAGTACGCGCATGGAAAGCATTGAGAAC
AACACTGAGGGTGAAAACGGGAAAGAGAACGCACATAACTCTGAGCCTGA
GCCGTTTGTTCCTAGGAACGCTTTCATATTGGCATTCTTCGGCTGGGACT
CTGTCCCGGACGGGACAGCTGGTTTGGTCGGCTGTAGCGTGTGCTTCCGG
AGATTGGGCCTGTGGATGTACAAACCAAAGGCCAACGGGGATGAGGCTCT
TTACGACTCTTTGGAAGTGGTGAACGAGCATATGGACTACTGTCCTTGGG
TGAATGGGAAGGCTCAGAGTGGAACAGGACGGGCCACCGAGAAACTAGAA
GGCCTACGTTCCGGCTGGGAGCTGCTGGGCCAGGCACTCAATGTGCGCCA
TCGTCGACTGAATCGGTCGACCACCTCGGGAGACAGTCGTGCTGTCTCTG
AGGTACCATCCACGGATGAGCCCGTGGTGGACGATGTGAACCCAGAAGTT
AAAAAGGCCAGTGACCGGGAATGGTGGGCCAAGTTACGCCGCATGCGACA
GGTCTTGAACGTCAGTTCGCCTAGGAAGAAGCCGACTTCGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22820CAN33_22820Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22820-T1.exon1CAN33_22820-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_22820-T1.exon2CAN33_22820-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22820-T1.exon3CAN33_22820-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22820-T1.cdsCAN33_22820-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22820-T1CAN33_22820-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.4
NoteEggNog:ENOG41
DBxrefInterPro:IPR013909
DBxrefInterPro:IPR012935
DBxrefPFAM:PF07967
DBxrefPFAM:PF08600
ProductC3HC zinc finger-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:662839..664269 +
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