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CAN33_22870-T1, CAN33_22870-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22870-T1
Unique NameCAN33_22870-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:693421..694336-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22870-T1 ID=CAN33_22870-T1|Name=CAN33_22870-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=916bp|location=Sequence derived from alignment at NKJJ01000002.1:693421..694336- (Aspergillus niger FDAARGOS_311)
ATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCG
CTTTGTCGCAACGACCGGTACGTGCCGGCTTTCTATCTGTCCTGCGCTGC
TGGTTTCTCGGCCGGGAGAGAGCAATATGCCCCAATGCAGGGGAGATGTC
TCTCGTGCTTCTGCAGGATACACTTGATCACATTCCAGCATATCACTAAT
ATCTCTCAGTCGGTCGCGATAAGATCCTTCGAACCCTGCAGTACTTCTCC
CGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAGTCCGCCAT
CGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCGGAAGATTC
TGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCATTGGCCTCC
GACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCCGTCGGCCG
TCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCACCGTTATTG
ACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGCAGGAGCAC
GCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTCGCGGGCGT
ATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGACCGCAAGG
AAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAGTATGTTTTATGT
TCTTTGGCCCAATCTACTCGCGCTGGGTCAGTATACTAACATTGTATTTG
CAGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACC
TGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATC
GTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTG
GCGGAAGACTGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:693421..694336-

>CAN33_22870-T1 ID=CAN33_22870-T1|Name=CAN33_22870-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2124bp|location=Sequence derived from alignment at NKJJ01000002.1:693421..694336- (Aspergillus niger FDAARGOS_311)
GGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACCTGA
GCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATCGTG
GGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTGGCG
GAAGACTGCGTAATCGGTCGCGATAAGATCCTTCGAACCCTGCAGTACTT
CTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAGTCCG
CCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCGGAAG
ATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCATTGGC
CTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCCGTCG
GCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCACCGTT
ATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGCAGGA
GCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTCGCGG
GCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGACCGC
AAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAATGGTCGCA
GACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCGCTTTGTCGC
AACGACCGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTG
TGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACG
GCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCC
CAGTGGCGGAAGACTGCGTAATCGGTCGCGATAAGATCCTTCGAACCCTG
CAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCC
CCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAA
CTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCC
GCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCT
CGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAG
TCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGA
CTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGC
TGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCC
TCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAA
TGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCGC
TTTGTCGCAACGACCGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCC
GACCTTTGTGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCT
CGATGACGGCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTA
TCTGGTCCCAGTGGCGGAAGACTGCGTAATCGGTCGCGATAAGATCCTTC
GAACCCTGCAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACC
AACCGCCCCCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTT
CGGAACAACTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGA
AGGCAGCCGCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTC
CGTTATCTCGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCT
CGATACAGTCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGG
CCAAGCGACTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTC
TGCAGCGCTGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGA
GAAGACCCTCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGC
TTGAGAAATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACT
ACCTGCGCTTTGTCGCAACGACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
Vocabulary: Biological Process
TermDefinition
GO:0016559peroxisome fission
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22870CAN33_22870Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22870-T1CAN33_22870-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22870-T1.cdsCAN33_22870-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22870-T1.exon3CAN33_22870-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_22870-T1.exon2CAN33_22870-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22870-T1.exon1CAN33_22870-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG0926436T
DBxrefInterPro:IPR008733
DBxrefPFAM:PF05648
ProductPeroxisomal biogenesis factor 11 (PEX11) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:693421..694336 -
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