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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:728924..730646+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22915-T1 ID=CAN33_22915-T1|Name=CAN33_22915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1723bp|location=Sequence derived from alignment at NKJJ01000002.1:728924..730646+ (Aspergillus niger FDAARGOS_311)
ATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCA
CCGTGTCAGCAGCTGTCACCACAGTGGTAAGTGTGGCAACCATCTCTGAC
GCATCACATCTTTTTCCCGTCGCAATTGCTAACGTGGCTTGGCTGCAGAC
CGCCCCTTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGC
TCACTGTCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGT
GCGGTGACAAGAAAAAGAATTGCCACAAGAATGACTCAGATCCCCATGCT
ACGGATAAGCGGGATCACAAGCGTGAGCATGATGGTGATGGTGAACTGGT
TCATAGTTTTCTGATCTGGATTTTACAGAGGACTCCCGTCCAAAATGTGG
CTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAAGAAGGAACCCCACC
TGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCCCAGCTGCGACGCTG
TTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACCAAATCGGAGAGTAC
CTTGACCATCTTCCGCGATGGCCACCACAAGCCGGCTCATAAGCACAACG
ACATGGCTCACAAATGCGGTCTGCCCTATACGATACCCCGTTCTCATACC
ATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGACCACCTGCCTTTGGT
CCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCAACAACAGCCCGCAG
AACAGTCACCTTCGCGCGGACAACATCGCCGTGTCAAGTCTGAACATGGT
TCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAACGTCCCGACAACCGT
TCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGTTCAGACAGCGGAGA
ACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGATGCCTATGAAGACC
CCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTCGACATGTCATCATT
CTCATCCTTCCCAACAACAGCGACATCGCCTGTCAATTGTGTCGCATTTC
AGGACCCCTACAAGGAGCCTTTCTTCACGTCACCGGAGGGCGACGTGTCT
CTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGATTGGTCAAGCTTCCC
TCTGTACTCCTCGGAAGTACCAGCCGCGACAAGCACTCAAGCACCTTCCT
ACGCAAGCTTCGATTACAACTCTATGGCACCCGGGTTCCCAGCCCATCAT
CATCCGGTGACATCTCTGAAGCGGATGAGTTCGCGCCGATCCCTGGCTTG
GGACGTACTGGCAGCGATCTGCACGATCTCAACAGCGTTAGCGAGGGCTC
CGATATCGACCATTTCCGCATCAGCTCCGCGTCGTCCTTCATTGGCCTTC
CCCAGGCACAGCTCTTGGCATCGAATAACCTTGAGTCGATTGACATTGAC
GACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTAGAGCATCAGCT
CCAGGCCACGATGGGCATGGAAGCCAAGCAACTTCCGACCGAGGACGCCT
TCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTGACTACACCGACTGCC
AGCATGTCGATGACCACGCCTCCGACCGAAGCCGCTTGGAACGTGGGGCT
CTTCGACCCCAATACTGCCCCCATGAGCGAAAACAGCAATGGCAATTTCT
ACGTGCTGCCATGGGTGCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:728924..730646+ >CAN33_22915-T1 ID=CAN33_22915-T1|Name=CAN33_22915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6168bp|location=Sequence derived from alignment at NKJJ01000002.1:728924..730646+ (Aspergillus niger FDAARGOS_311)
ATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCA
CCGTGTCAGCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACA
AAAAAGGCCGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAG
TCACGGACAACCCACACTAAGTGCGAGTGCGGTGACAAGAAAAAGAATTG
CCACAAGAATGACTCAGATCCCCATGCTACGGATAAGCGGGATCACAAGC
AGGACTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGT
GCGCTGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCC
TCCACCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGA
CCTCGACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCAC
AAGCCGGCTCATAAGCACAACGACATGGCTCACAAATGCGGTCTGCCCTA
TACGATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCT
CGGTCGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTC
GCGAATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCG
CCGTGTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGC
CGGACAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTC
CCTCAAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCC
GGTCTCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGT
TACCCTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACATCG
CCTGTCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCAC
GTCACCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTC
CAGTCGATTGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACC
CGGGTTCCCAGCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTT
CGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCA
ACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCCGCG
TCGTCCTTCATTGGCCTTCCCCAGGCACAGCTCTTGGCATCGAATAACCT
TGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCG
CGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAA
CTTCCGACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCC
GGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAG
CCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAA
AACAGCAATGGCAATTTCTACGTGCTGCCATGGGTGCAGTAAATGCTTAT
CGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGTGTCA
GCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACAAAAAAGGC
CGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAGTCACGGAC
AACCCACACTAAGTGCGAGTGCGGTGACAAGAAAAAGAATTGCCACAAGA
ATGACTCAGATCCCCATGCTACGGATAAGCGGGATCACAAGCAGGACTCC
CGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAA
GAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCC
CAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACC
AAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGCCGGC
TCATAAGCACAACGACATGGCTCACAAATGCGGTCTGCCCTATACGATAC
CCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGAC
CACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCA
ACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGTGTCA
AGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAAC
GTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGT
TCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGA
TGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTC
GACATGTCATCATTCTCATCCTTCCCAACAACAGCGACATCGCCTGTCAA
TTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACGTCACCGG
AGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGAT
TGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCCGGGTTCC
CAGCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCGCCGA
TCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCAACAGCGTT
AGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCCGCGTCGTCCTT
CATTGGCCTTCCCCAGGCACAGCTCTTGGCATCGAATAACCTTGAGTCGA
TTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTA
GAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTCCGAC
CGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTGACTA
CACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAGCCGCTTGG
AACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAAAACAGCAA
TGGCAATTTCTACGTGCTGCCATGGGTGCAGTAAATGCTTATCGATGGCG
AGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGTGTCAGCAGCTGT
CACCACAGTGACCGCCCCTTGACCCACATTAACAAAAAAGGCCGTCCTGT
CTCCCAATGCGCTCACTGTCGCGGCCTACGCAAGTCACGGACAACCCACA
CTAAGTGCGAGTGCGGTGACAAGAAAAAGAATTGCCACAAGAATGACTCA
GATCCCCATGCTACGGATAAGCGGGATCACAAGCAGGACTCCCGTCCAAA
ATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAAGAAGGAAC
CCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCCCAGCTGCG
ACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACCAAATCGGA
GAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGCCGGCTCATAAGC
ACAACGACATGGCTCACAAATGCGGTCTGCCCTATACGATACCCCGTTCT
CATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGACCACCTGCC
TTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCAACAACAGC
CCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGTGTCAAGTCTGAA
CATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAACGTCCCGAC
AACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGTTCAGACAG
CGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGATGCCTATG
AAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTCGACATGTC
ATCATTCTCATCCTTCCCAACAACAGCGACATCGCCTGTCAATTGTGTCG
CATTTCAGGACCCCTACAAGGAGCCTTTCTTCACGTCACCGGAGGGCGAC
GTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGATTGCACCTT
CCTACGCAAGCTTCGATTACAACTCTATGGCACCCGGGTTCCCAGCCCAT
CATCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCGCCGATCCCTGGC
TTGGGACGTACTGGCAGCGATCTGCACGATCTCAACAGCGTTAGCGAGGG
CTCCGATATCGACCATTTCCGCATCAGCTCCGCGTCGTCCTTCATTGGCC
TTCCCCAGGCACAGCTCTTGGCATCGAATAACCTTGAGTCGATTGACATT
GACGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTAGAGCATCA
GCTCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTCCGACCGAGGACG
CCTTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTGACTACACCGACT
GCCAGCATGTCGATGACCACGCCTCCGACCGAAGCCGCTTGGAACGTGGG
GCTCTTCGACCCCAATACTGCCCCCATGAGCGAAAACAGCAATGGCAATT
TCTACGTGCTGCCATGGGTGCAGTAAATGCTTATCGATGGCGAGAAGTGG
GCTTGTGAAGCTTGCGTCCGGGGTCACCGTGTCAGCAGCTGTCACCACAG
TGACCGCCCCTTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAAT
GCGCTCACTGTCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGC
GAGTGCGGTGACAAGAAAAAGAATTGCCACAAGAATGACTCAGATCCCCA
TGCTACGGATAAGCGGGATCACAAGCAGGACTCCCGTCCAAAATGTGGCT
GCACTCATGGTCAGCGCTGTACCTGTGCGCTGAAGAAGGAACCCCACCTG
GATACCGTTCCGGAGACCGGCCTCCCTCCACCCCCAGCTGCGACGCTGTT
GGATCAGCCCAAGAAGCCGCAGCTGACCTCGACCAAATCGGAGAGTACCT
TGACCATCTTCCGCGATGGCCACCACAAGCCGGCTCATAAGCACAACGAC
ATGGCTCACAAATGCGGTCTGCCCTATACGATACCCCGTTCTCATACCAT
CCATGCTGGCGATGTGGCCCGCCGCTCGGTCGACCACCTGCCTTTGGTCC
AGCCCACCATGCTCAACGAGGGTTTCGCGAATCAACAACAGCCCGCAGAA
CAGTCACCTTCGCGCGGACAACATCGCCGTGTCAAGTCTGAACATGGTTC
TCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAACGTCCCGACAACCGTTC
CCCCACTCGACATCTCGTCCTTTTTCCCTCAAGTTCAGACAGCGGAGAAC
GCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGATGCCTATGAAGACCCC
TCTGGACCCACTGGTCACGTCGGGGTTACCCTTCGACATGTCATCATTCT
CATCCTTCCCAACAACAGCGACATCGCCTGTCAATTGTGTCGCATTTCAG
GACCCCTACAAGGAGCCTTTCTTCACGTCACCGGAGGGCGACGTGTCTCT
TCAGTCGACCGCATTCAGCGCCCCTCCAGTCGATTGCACCTTCCTACGCA
AGCTTCGATTACAACTCTATGGCACCCGGGTTCCCAGCCCATCATCATCC
GGTGACATCTCTGAAGCGGATGAGTTCGCGCCGATCCCTGGCTTGGGACG
TACTGGCAGCGATCTGCACGATCTCAACAGCGTTAGCGAGGGCTCCGATA
TCGACCATTTCCGCATCAGCTCCGCGTCGTCCTTCATTGGCCTTCCCCAG
GCACAGCTCTTGGCATCGAATAACCTTGAGTCGATTGACATTGACGACTT
CCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTAGAGCATCAGCTCCAGG
CCACGATGGGCATGGAAGCCAAGCAACTTCCGACCGAGGACGCCTTCGCC
ATGTCGAATGCTGAGACTTTCAAGCCGGTGACTACACCGACTGCCAGCAT
GTCGATGACCACGCCTCCGACCGAAGCCGCTTGGAACGTGGGGCTCTTCG
ACCCCAATACTGCCCCCATGAGCGAAAACAGCAATGGCAATTTCTACGTG
CTGCCATGGGTGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0005507 | copper ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036395 |
| DBxref | InterPro:IPR001083 |
| DBxref | PFAM:PF00649 |
| Product | Copper fist DNA binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:728924..730646 + |
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