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CAN33_22935-T1, CAN33_22935-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22935-T1
Unique NameCAN33_22935-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:746901..749216+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22935-T1 ID=CAN33_22935-T1|Name=CAN33_22935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2316bp|location=Sequence derived from alignment at NKJJ01000002.1:746901..749216+ (Aspergillus niger FDAARGOS_311)
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGTATGTT
CCGCGCCGTTTTCGTTCCAATTTCCCCGCAATTCTCTTAAACAGGTGGTT
CGGCTGCGACTAACAATCAGACAGGCGAATGTAGAAAGGCGGGCAAAATC
CTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGAT
TCCTCCGGAGATTTTGGCAGGAGCCAAGGTAATTAGCAAATTCAATACTG
AGCCTGTTGCTCGAAAGTCGCACCGTCGCTCACGGTTTCTTCCCTAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGGTAAGCAGGCCCGCGTTTCGCAGAAACCATGTCTTC
CTCGGCCATGAAACTAATCATTGCTATTCAGTAACTATGTCGAAACTGCT
TAGGAGTCGGCTTGTCCTAGTTGGACTCACGCGGAATGATATTGGACGAT
GCGAGCACTTTTAACGCCTTGTTCCTCTTTACGAATGCTTCGATGTTCCT
TTCTTGTTTGGTATTGAGCTCTCTTGTCATCGTTTAAGACTCACCCCCTT
TAGTTTTTGTTCTCTCTTTGCTTTTTCCTGTCGGCTTTCTAGTGTAAGCG
CCGGAGTTGCCTGTTGGGCCGACCAGCGGATTCGGGGTGGCTTTTGAACG
GATAAGTGACAAAACGGGACAGTTACACCTGTGTATGTGTTCTCTTTGGC
GATGGTTCTAGCTTTTGGTATATGCTTGTGTGATAGTGTTGGACCACCTC
TGGGTATACATAAGACTTCCCTCTTGCTGTTTTTTTTTTTTATTGGGACT
CTAGGTTTATAACAGTCATAAATGGAATATTCCCTCATTGCTGCTGCGCC
GAGGATGAATTGGTTGGACATGTTTTAGATGATTGCAGCGGCTACTTGGC
GGATATGCTTCTATCCCTTGCGAGGAAGGGAGGATAAATGCGAATAAAGA
AACGGGTGGCTGCCGTCAGAAAGCTCCGACGAGCGTCAAGGAGTCGTCAG
CAGTCAAGCTCCCAGCGACGTTCAGGTTCCTTGCTCATTGCATTACAGTT
AGATGCGGTCGGTACATTCCTCGGGAGACTCTCCTGCACCAGATTGAACT
CAACCGGGACCCGTCCTTCTGGGCCATTGGACCTCGTGGAGCCAGCCCCT
CAGCAACATCCCCGAAGTCATCGGATGAGGCCCGCTCGGCCAATAGAGGT
CAGGAACACCAGGCACGAGACTCGCGACGGGTCTCACGCGAGAAGGCAGA
GAAGCAGTGCGATTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:746901..749216+

>CAN33_22935-T1 ID=CAN33_22935-T1|Name=CAN33_22935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5712bp|location=Sequence derived from alignment at NKJJ01000002.1:746901..749216+ (Aspergillus niger FDAARGOS_311)
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGCGAATG
TAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGT
TTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGATGCGGTCGGTACATTCCTCGGGAGACTCTCCTGCA
CCAGATTGAACTCAACCGGGACCCGTCCTTCTGGGCCATTGGACCTCGTG
GAGCCAGCCCCTCAGCAACATCCCCGAAGTCATCGGATGAGGCCCGCTCG
GCCAATAGAGGTCAGGAACACCAGGCACGAGACTCGCGACGGGTCTCACG
CGAGAAGGCAGAGAAGCAGTGCGATTGAATGCCTCTCGGAATTCACAATC
CGTTACCTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCAAAATCCTC
GCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCC
TCCGGAGATTTTGGCAGGAGCCAAGGGTCTCGCCGTTCTTACTGTCCTGA
AAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCT
CGACTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGG
TGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTA
TCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTG
ACGCTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGC
GGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCAT
ACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATG
CTGGTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTC
GGCACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATC
CTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAAT
GGTAGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGA
TGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGC
GCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGG
CCCCGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGG
AGGGTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATT
ACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGAC
TATGTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGT
GTTTGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCA
TAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAG
AAAGGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTG
GTGGACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGATGCGGTC
GGTACATTCCTCGGGAGACTCTCCTGCACCAGATTGAACTCAACCGGGAC
CCGTCCTTCTGGGCCATTGGACCTCGTGGAGCCAGCCCCTCAGCAACATC
CCCGAAGTCATCGGATGAGGCCCGCTCGGCCAATAGAGGTCAGGAACACC
AGGCACGAGACTCGCGACGGGTCTCACGCGAGAAGGCAGAGAAGCAGTGC
GATTGAATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAG
CGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGAC
AAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCC
AAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGC
TCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGT
CTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATT
GGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGT
CCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGA
TCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGC
ACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTT
TGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGA
ACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGA
ACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTC
GCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACA
TCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGG
GGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGG
CTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGG
CAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACT
ACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCG
GAGCAATACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGC
CTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCG
GCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGC
GGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCC
TCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGT
CGCGTTGGCATTTTCCCAAGATGCGGTCGGTACATTCCTCGGGAGACTCT
CCTGCACCAGATTGAACTCAACCGGGACCCGTCCTTCTGGGCCATTGGAC
CTCGTGGAGCCAGCCCCTCAGCAACATCCCCGAAGTCATCGGATGAGGCC
CGCTCGGCCAATAGAGGTCAGGAACACCAGGCACGAGACTCGCGACGGGT
CTCACGCGAGAAGGCAGAGAAGCAGTGCGATTGAATGCCTCTCGGAATTC
ACAATCCGTTACCTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCAAA
ATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGT
GATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGTCTCGCCGTTCTTACTG
TCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTC
GTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCAC
TGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTG
TGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGG
ACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACG
AAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGT
TCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGA
AGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCG
GGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCG
CGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCC
CGGAATGGTAGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCA
TGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAA
CGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGG
GACCGGCCCCGCCGTGCGAATACATGGGCAGACGATATATATGATCGACC
TGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCG
ACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGAC
GAGGACTATGTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAA
ACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACC
AGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGT
TTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGA
GGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGAT
GCGGTCGGTACATTCCTCGGGAGACTCTCCTGCACCAGATTGAACTCAAC
CGGGACCCGTCCTTCTGGGCCATTGGACCTCGTGGAGCCAGCCCCTCAGC
AACATCCCCGAAGTCATCGGATGAGGCCCGCTCGGCCAATAGAGGTCAGG
AACACCAGGCACGAGACTCGCGACGGGTCTCACGCGAGAAGGCAGAGAAG
CAGTGCGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22935CAN33_22935Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22935-T1.exon1CAN33_22935-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_22935-T1.exon2CAN33_22935-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_22935-T1.exon3CAN33_22935-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_22935-T1.exon4CAN33_22935-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22935-T1.cdsCAN33_22935-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22935-T1CAN33_22935-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR033643
DBxrefInterPro:IPR007461
DBxrefInterPro:IPR001452
DBxrefPFAM:PF04366
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
ProductFamily of unknown function (DUF500) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:746901..749216 +
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