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CAN33_23060-T1, CAN33_23060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_23060-T1
Unique NameCAN33_23060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:829934..830976+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_23060-T1 ID=CAN33_23060-T1|Name=CAN33_23060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1043bp|location=Sequence derived from alignment at NKJJ01000002.1:829934..830976+ (Aspergillus niger FDAARGOS_311)
ATGTCGCACCCCCAACAGAATCTCCTCGCCACCACAACCTCCAACACCAA
AGCAGGCAATCCCGTCTTCCCCGGCTGGTACGCCGACCCCGAAGCACGCC
TCTTCAACGCCCAGTACTGGATCTACCCAACCTACTCAGCCGACTACAGC
GAACAAACCTTCTTCGATGCCTTCAGCTCCCCCGATCTACTCACTTGGAC
CAAGCACCCCACCATCCTAAACATCACTAATATCCCTTGGTCAACGAACC
GTGCCGCTTGGGCCCCGTCCGTGGGCCGGAAACTCCGCTCCTCCGCCAAC
GCCGAAGAAGAATATGACTACTTCATGTATTTCTCCGTTGGTGATGGAAC
TGGCATCGGTGTTGCGAAATCGACCACGGGGAAACCTGAGGGTCCCTATG
AAGACGTCCTCGGTGAACCTCTAGTTAATGGCACAGTGTATGGGGCGGAG
GCCATTGATGCCCAGATATTTCAAGATGATGATGGCCGGAATTGGTTGTA
TTTTGGGGGTTGGAGTCATGCAGTTGTTGTGGAATTGGGCGAGGATATGA
TTAGTCTGAAGGGGGATTATTTGGAGATTACCCCGGAGGGGTATGTGGAA
GGCCCGTGGATGTTAAAGAGGAATGGGATTTATTATTATATGTTTTCGGT
TGGGGGGTAAGTTTATCTCTGCAGATTTCTGTGTGTTTGAAGAAACAGGC
ACGGTTCTCGTGGAGATGCTAACACAGCTTGTGTGGGAACAGATGGGGCG
ATAATTCATACGGAGTCAGTTATGTCACGGCTGATTCGCCGACGGGGCCG
TTCTCGAGTACACCAAAGAAGATTCTACAAGGGAATGATGCCGTTGGCAC
GAGTACTGGGCACAATAGTGTGTTTACGCCGGATGGACAAGATTACTATA
TTGTCTATCATCGTCGATATGTCAACGACACGGCCCGGGATCATCGCGTG
ACTTGTATAGATCGCATGTACTTCAATGAGGCTGGGGAAATCCTACCGGT
GAATATCACTCTAGAGGGTGTTGAGGGGAGGACTTTATCGTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:829934..830976+

>CAN33_23060-T1 ID=CAN33_23060-T1|Name=CAN33_23060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1782bp|location=Sequence derived from alignment at NKJJ01000002.1:829934..830976+ (Aspergillus niger FDAARGOS_311)
ATGTCGCACCCCCAACAGAATCTCCTCGCCACCACAACCTCCAACACCAA
AGCAGGCAATCCCGTCTTCCCCGGCTGGTACGCCGACCCCGAAGCACGCC
TCTTCAACGCCCAGTACTGGATCTACCCAACCTACTCAGCCGACTACAGC
GAACAAACCTTCTTCGATGCCTTCAGCTCCCCCGATCTACTCACTTGGAC
CAAGCACCCCACCATCCTAAACATCACTAATATCCCTTGGTCAACGAACC
GTGCCGCTTGGGCCCCGTCCGTGGGCCGGAAACTCCGCTCCTCCGCCAAC
GCCGAAGAAGAATATGACTACTTCATGTATTTCTCCGTTGGTGATGGAAC
TGGCATCGGTGTTGCGAAATCGACCACGGGGAAACCTGAGGGTCCCTATG
AAGACGTCCTCGGTGAACCTCTAGTTAATGGCACAGTGTATGGGGCGGAG
GCCATTGATGCCCAGATATTTCAAGATGATGATGGCCGGAATTGGTTGTA
TTTTGGGGGTTGGAGTCATGCAGTTGTTGTGGAATTGGGCGAGGATATGA
TTAGTCTGAAGGGGGATTATTTGGAGATTACCCCGGAGGGATGGGGCGAT
AATTCATACGGAGTCAGTTATGTCACGGCTGATTCGCCGACGGGGCCGTT
CTCGAGTACACCAAAGAAGATTCTACAAGGGAATGATGCCGTTGGCACGA
GTACTGGGCACAATAGTGTGTTTACGCCGGATGGACAAGATTACTATATT
GTCTATCATCGTCGATATGTCAACGACACGGCCCGGGATCATCGCGTGAC
TTGTATAGATCGCATGTACTTCAATGAGGCTGGGGAAATCCTACCGGTGA
ATATCACTCTAGAGGGTGTTGAGGGGAGGACTTTATCGTAGATGTCGCAC
CCCCAACAGAATCTCCTCGCCACCACAACCTCCAACACCAAAGCAGGCAA
TCCCGTCTTCCCCGGCTGGTACGCCGACCCCGAAGCACGCCTCTTCAACG
CCCAGTACTGGATCTACCCAACCTACTCAGCCGACTACAGCGAACAAACC
TTCTTCGATGCCTTCAGCTCCCCCGATCTACTCACTTGGACCAAGCACCC
CACCATCCTAAACATCACTAATATCCCTTGGTCAACGAACCGTGCCGCTT
GGGCCCCGTCCGTGGGCCGGAAACTCCGCTCCTCCGCCAACGCCGAAGAA
GAATATGACTACTTCATGTATTTCTCCGTTGGTGATGGAACTGGCATCGG
TGTTGCGAAATCGACCACGGGGAAACCTGAGGGTCCCTATGAAGACGTCC
TCGGTGAACCTCTAGTTAATGGCACAGTGTATGGGGCGGAGGCCATTGAT
GCCCAGATATTTCAAGATGATGATGGCCGGAATTGGTTGTATTTTGGGGG
TTGGAGTCATGCAGTTGTTGTGGAATTGGGCGAGGATATGATTAGTCTGA
AGGGGGATTATTTGGAGATTACCCCGGAGGGATGGGGCGATAATTCATAC
GGAGTCAGTTATGTCACGGCTGATTCGCCGACGGGGCCGTTCTCGAGTAC
ACCAAAGAAGATTCTACAAGGGAATGATGCCGTTGGCACGAGTACTGGGC
ACAATAGTGTGTTTACGCCGGATGGACAAGATTACTATATTGTCTATCAT
CGTCGATATGTCAACGACACGGCCCGGGATCATCGCGTGACTTGTATAGA
TCGCATGTACTTCAATGAGGCTGGGGAAATCCTACCGGTGAATATCACTC
TAGAGGGTGTTGAGGGGAGGACTTTATCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_23060CAN33_23060Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23060-T1.exon1CAN33_23060-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_23060-T1.exon2CAN33_23060-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23060-T1.cdsCAN33_23060-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23060-T1CAN33_23060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:GH43_2
NoteCAZy:GH43_1
NoteCAZy:GH43_32
NoteCAZy:GH43_31
NoteCAZy:GH43_30
NoteCAZy:GH43_29
NoteCAZy:GH43_3
NoteCAZy:GH43_34
NoteCAZy:GH43
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR006710
DBxrefPFAM:PF04616
ProductGlycosyl hydrolases family 43 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:829934..830976 +
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