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CAN33_23185-T1, CAN33_23185-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_23185-T1
Unique NameCAN33_23185-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:909094..910082+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_23185-T1 ID=CAN33_23185-T1|Name=CAN33_23185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=989bp|location=Sequence derived from alignment at NKJJ01000002.1:909094..910082+ (Aspergillus niger FDAARGOS_311)
ATGTCCAGCCAACCTCTTACCTGGGTCGTCACCGGCTGCTCCTCTGGCAT
CGGCGAAGCCCTAGTCCGCGCCATCCTCGCCCAGGTGAGAAACCCCCGCA
TTTGACCCATCCGGAGTTTCTGCTCACACAGGTCAATAAACAAACAGGGT
GACAAAGTCATCGCAACAGCTCGCGCCCGCAACAATGTCAGCGGAGCCGA
CCGTCTCTCAGCTCTGAAAGAAGCCGGAGCCGCAGTGTTCGAGCTCGACG
TGAGCCGGCCCCAGGAAGAATTAGACGCCAAGGCACGCGAAATCTGGGAG
ATCTACGGAAAAGTCGACGTACTAGTCAACAACGCGGGCTACATCGACGC
AGGGCTTGTCGAAGAAATTACGTCAGTCCTTCCTCCGTCATATACCGCAC
TCACTGTACTAACAGACCACCCAGCGAACCCTTTTTGATTGATGCCCTCC
GCGCCAACGCCTTCGGTCCTCTCAACGTATCCCGCGCCTTCCTGCCCCTC
ATGCGCGCCCAGAAATCTGGAACCGTGCTGTTCGCCAGCAGCCTTGGAGT
CTACTTCGGTGCGCCCGGCGCATCCTGCTACACCGGAGGCAAGGGTCTCC
TGGAGGCGGTGGTGCCCAATCTGGCCCTGGAGCTGGCGGCATTCGGAATC
CGCACTTCGCTACTCACCTACGGCTACTACCGTACGGAGGTTATGAACCC
TGGAAACTTCCACAGCCGGGCGCCTCGCCCACTGCCGGAGTATGAGGAGC
TCCGGGGTCTGGTGGAAGCTGGGTGTGCGGCTACGAACCACAACCAGCAG
GGTGATCCGGCGAAGGCGGCGAAGGTGGTGGTGGAGGCAGTCAAGGGAAC
GGGCAAGTTTGAGGGAAAGCAATTGCCTTTGAGATTGCCGATTGGAAAGG
ATGCTGTTGCTGCGATGCGGAAGGCTTGTGAGGAGAGGTTGGCTATTTGT
GATGAGTTTGAGGGGCTGGTGGATCAGACGGATATCTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:909094..910082+

>CAN33_23185-T1 ID=CAN33_23185-T1|Name=CAN33_23185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2619bp|location=Sequence derived from alignment at NKJJ01000002.1:909094..910082+ (Aspergillus niger FDAARGOS_311)
ATGTCCAGCCAACCTCTTACCTGGGTCGTCACCGGCTGCTCCTCTGGCAT
CGGCGAAGCCCTAGTCCGCGCCATCCTCGCCCAGGGTGACAAAGTCATCG
CAACAGCTCGCGCCCGCAACAATGTCAGCGGAGCCGACCGTCTCTCAGCT
CTGAAAGAAGCCGGAGCCGCAGTGTTCGAGCTCGACGTGAGCCGGCCCCA
GGAAGAATTAGACGCCAAGGCACGCGAAATCTGGGAGATCTACGGAAAAG
TCGACGTACTAGTCAACAACGCGGGCTACATCGACGCAGGGCTTGTCGAA
GAAATTACCGAACCCTTTTTGATTGATGCCCTCCGCGCCAACGCCTTCGG
TCCTCTCAACGTATCCCGCGCCTTCCTGCCCCTCATGCGCGCCCAGAAAT
CTGGAACCGTGCTGTTCGCCAGCAGCCTTGGAGTCTACTTCGGTGCGCCC
GGCGCATCCTGCTACACCGGAGGCAAGGGTCTCCTGGAGGCGGTGGTGCC
CAATCTGGCCCTGGAGCTGGCGGCATTCGGAATCCGCACTTCGCTACTCA
CCTACGGCTACTACCGTACGGAGGTTATGAACCCTGGAAACTTCCACAGC
CGGGCGCCTCGCCCACTGCCGGAGTATGAGGAGCTCCGGGGTCTGGTGGA
AGCTGGGTGTGCGGCTACGAACCACAACCAGCAGGGTGATCCGGCGAAGG
CGGCGAAGGTGGTGGTGGAGGCAGTCAAGGGAACGGGCAAGTTTGAGGGA
AAGCAATTGCCTTTGAGATTGCCGATTGGAAAGGATGCTGTTGCTGCGAT
GCGGAAGGCTTGTGAGGAGAGGTTGGCTATTTGTGATGAGTTTGAGGGGC
TGGTGGATCAGACGGATATCTAGATGTCCAGCCAACCTCTTACCTGGGTC
GTCACCGGCTGCTCCTCTGGCATCGGCGAAGCCCTAGTCCGCGCCATCCT
CGCCCAGGGTGACAAAGTCATCGCAACAGCTCGCGCCCGCAACAATGTCA
GCGGAGCCGACCGTCTCTCAGCTCTGAAAGAAGCCGGAGCCGCAGTGTTC
GAGCTCGACGTGAGCCGGCCCCAGGAAGAATTAGACGCCAAGGCACGCGA
AATCTGGGAGATCTACGGAAAAGTCGACGTACTAGTCAACAACGCGGGCT
ACATCGACGCAGGGCTTGTCGAAGAAATTACCGAACCCTTTTTGATTGAT
GCCCTCCGCGCCAACGCCTTCGGTCCTCTCAACGTATCCCGCGCCTTCCT
GCCCCTCATGCGCGCCCAGAAATCTGGAACCGTGCTGTTCGCCAGCAGCC
TTGGAGTCTACTTCGGTGCGCCCGGCGCATCCTGCTACACCGGAGGCAAG
GGTCTCCTGGAGGCGGTGGTGCCCAATCTGGCCCTGGAGCTGGCGGCATT
CGGAATCCGCACTTCGCTACTCACCTACGGCTACTACCGTACGGAGGTTA
TGAACCCTGGAAACTTCCACAGCCGGGCGCCTCGCCCACTGCCGGAGTAT
GAGGAGCTCCGGGGTCTGGTGGAAGCTGGGTGTGCGGCTACGAACCACAA
CCAGCAGGGTGATCCGGCGAAGGCGGCGAAGGTGGTGGTGGAGGCAGTCA
AGGGAACGGGCAAGTTTGAGGGAAAGCAATTGCCTTTGAGATTGCCGATT
GGAAAGGATGCTGTTGCTGCGATGCGGAAGGCTTGTGAGGAGAGGTTGGC
TATTTGTGATGAGTTTGAGGGGCTGGTGGATCAGACGGATATCTAGATGT
CCAGCCAACCTCTTACCTGGGTCGTCACCGGCTGCTCCTCTGGCATCGGC
GAAGCCCTAGTCCGCGCCATCCTCGCCCAGGGTGACAAAGTCATCGCAAC
AGCTCGCGCCCGCAACAATGTCAGCGGAGCCGACCGTCTCTCAGCTCTGA
AAGAAGCCGGAGCCGCAGTGTTCGAGCTCGACGTGAGCCGGCCCCAGGAA
GAATTAGACGCCAAGGCACGCGAAATCTGGGAGATCTACGGAAAAGTCGA
CGTACTAGTCAACAACGCGGGCTACATCGACGCAGGGCTTGTCGAAGAAA
TTACCGAACCCTTTTTGATTGATGCCCTCCGCGCCAACGCCTTCGGTCCT
CTCAACGTATCCCGCGCCTTCCTGCCCCTCATGCGCGCCCAGAAATCTGG
AACCGTGCTGTTCGCCAGCAGCCTTGGAGTCTACTTCGGTGCGCCCGGCG
CATCCTGCTACACCGGAGGCAAGGGTCTCCTGGAGGCGGTGGTGCCCAAT
CTGGCCCTGGAGCTGGCGGCATTCGGAATCCGCACTTCGCTACTCACCTA
CGGCTACTACCGTACGGAGGTTATGAACCCTGGAAACTTCCACAGCCGGG
CGCCTCGCCCACTGCCGGAGTATGAGGAGCTCCGGGGTCTGGTGGAAGCT
GGGTGTGCGGCTACGAACCACAACCAGCAGGGTGATCCGGCGAAGGCGGC
GAAGGTGGTGGTGGAGGCAGTCAAGGGAACGGGCAAGTTTGAGGGAAAGC
AATTGCCTTTGAGATTGCCGATTGGAAAGGATGCTGTTGCTGCGATGCGG
AAGGCTTGTGAGGAGAGGTTGGCTATTTGTGATGAGTTTGAGGGGCTGGT
GGATCAGACGGATATCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_23185CAN33_23185Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23185-T1.exon1CAN33_23185-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_23185-T1.exon2CAN33_23185-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_23185-T1.exon3CAN33_23185-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23185-T1.cdsCAN33_23185-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23185-T1CAN33_23185-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:909094..910082 +
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