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CAN33_23275-T1, CAN33_23275-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_23275-T1
Unique NameCAN33_23275-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:970387..972028-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_23275-T1 ID=CAN33_23275-T1|Name=CAN33_23275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1642bp|location=Sequence derived from alignment at NKJJ01000002.1:970387..972028- (Aspergillus niger FDAARGOS_311)
ATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTGCCAG
CTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGTATGC
TACGCTCTCTTTGTTGTTCGTAATATGTAACAACGAGCTAACCAGAAATT
GGCCAGGCGGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATAC
ACAGTGGCTCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCA
GGCAGGTGCCTTTTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACC
TAGGCCGCCGGCTCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGT
ACCATCCTACAGGTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGG
TCGAGTGATAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCG
TGTATGCGGCTGAAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCC
TGCTTCCAGTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCAC
GTATGCTGTGTCGATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTG
CGTTGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGC
ACGGTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAA
GGCTAGAGAGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGC
TCCAGCAAGAATTCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGA
GTCAAACAAGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTA
CCGGCTGTTCATCGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAA
ATACGTCCCTGGCGTATTACGCCACTCAAATCTTTACCGCCGTTGGTGCA
GGAAACTCAAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGT
CGGTGTCTCTATCTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGAT
GGCCGTTCATGATTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATT
GCCTGCATTTTGGCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGC
CTCGCCAGCTGGAATCGCCATGATTATCATGACATACTGTGAAGCATTCA
GTTACAACATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATT
TTTTCGAGCCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACA
ATGGCTTTTCAATTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACA
ACATCGGATGGAGGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATA
GTTGTATATTCTTATGTATTTCTTAAGGAGGTGCGTCCTACGCCCCAAAC
TGCATTATTAAGGAATTTGCTAACAAGGAGCAGACCTCCAAATACTCTCT
CGAGGAAATGCAAGGCGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATA
AACTTACGACTACTGAAACGGCAGATAAGACACATACCAGCGAGGTTGAG
GACAATCAAGGGACCAGCAGTGCAACGCCAAAAGAAGGATAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:970387..972028-

>CAN33_23275-T1 ID=CAN33_23275-T1|Name=CAN33_23275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4581bp|location=Sequence derived from alignment at NKJJ01000002.1:970387..972028- (Aspergillus niger FDAARGOS_311)
ACCTCCAAATACTCTCTCGAGGAAATGCAAGGCGTCTTTGGTGGCAGCGA
CCCTGCCAAGGATGATAAACTTACGACTACTGAAACGGCAGATAAGACAC
ATACCAGCGAGGTTGAGGACAATCAAGGGACCAGCAGTGCAACGCCAAAA
GAAGGATAAGCGGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGA
TACACAGTGGCTCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCATCCT
CCAGGCAGGTGCCTTTTTCGGCTGCTTTTTCACGACACCCATCGCATCCT
ACCTAGGCCGCCGGCTCGGCCTCATCATCAGTTCCCTTGTATTTACCGTC
GGTACCATCCTACAGGTCGTTAATTCGCATACTCTGGGGACGTTCTATGC
TGGTCGAGTGATAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTC
CCGTGTATGCGGCTGAAATGTCTCCCAAGGACCTACGTGGCCGACTCGGT
TCCTGCTTCCAGTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGT
CACGTATGCTGTGTCGATAGACCAGCCGTCCGCAACAAAACAATGGCAAA
TTGCGTTGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATG
TGCACGGTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGA
GAAGGCTAGAGAGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGG
AGCTCCAGCAAGAATTCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCT
CGAGTCAAACAAGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCG
CTACCGGCTGTTCATCGCCTTTACGATTCAGCTAGCGGCGCAACTTACCG
GAAATACGTCCCTGGCGTATTACGCCACTCAAATCTTTACCGCCGTTGGT
GCAGGAAACTCAAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGT
GGTCGGTGTCTCTATCTTCCAGATTTTCGTTATGGATCGCATCGGTCGGC
GATGGCCGTTCATGATTGGCGCCGCCGCAATGGGATCGTTCATGCTCATC
ATTGCCTGCATTTTGGCCACGCATCCGACCAGCTCCAGCGACACCGGAAG
CGCCTCGCCAGCTGGAATCGCCATGATTATCATGACATACTGTGAAGCAT
TCAGTTACAACATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAG
ATTTTTTCGAGCCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTC
ACAATGGCTTTTCAATTTCATGATGTCGCAGGTCACGCCGCATGCAATTG
ACAACATCGGATGGAGGATGTTTCTAATGTTTGCGATTTTCAACTACGCG
ATAGTTGTATATTCTTATGTATTTCTTAAGGAGATGGGTCGGAAATTGGG
CCTCTTCCGTGCTATCTATCTGGTGTCTGCCAGCTGCATGGGCTCTTTTG
CCTTTGCATTTGACACCGGTGTTATCAACCTCCAAATACTCTCTCGAGGA
AATGCAAGGCGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATAAACTTA
CGACTACTGAAACGGCAGATAAGACACATACCAGCGAGGTTGAGGACAAT
CAAGGGACCAGCAGTGCAACGCCAAAAGAAGGATAAGCGGTGTTCTTACT
CTGTCTTCTTTCCAGAATGACTTCGGATACACAGTGGCTCAGAAAACCTC
CGTCAACTCCAATGCCGTGTCCATCCTCCAGGCAGGTGCCTTTTTCGGCT
GCTTTTTCACGACACCCATCGCATCCTACCTAGGCCGCCGGCTCGGCCTC
ATCATCAGTTCCCTTGTATTTACCGTCGGTACCATCCTACAGGTCGTTAA
TTCGCATACTCTGGGGACGTTCTATGCTGGTCGAGTGATAGCTGGTCTTG
GTATCGGCGCCGCCACGGTGCTTATTCCCGTGTATGCGGCTGAAATGTCT
CCCAAGGACCTACGTGGCCGACTCGGTTCCTGCTTCCAGTTGTTCTTTGC
CTTGGGAGTTATGGTCGCCTACTGGGTCACGTATGCTGTGTCGATAGACC
AGCCGTCCGCAACAAAACAATGGCAAATTGCGTTGGGCTTGCAGCTTCTC
CCTTCGTCTCTTCTTCTGTTCGGTATGTGCACGGTTAAGGAGAGCGCTCG
GTGGCTCGCCTCCAAGGGCAAGATCGAGAAGGCTAGAGAGTCCCTGAAAT
GGGTCAGAGGCGGAGAAGAGACTGAGGAGCTCCAGCAAGAATTCGATGAG
ATTTTGGCAGGTATTGAAGAAGAAGCTCGAGTCAAACAAGGATTCACCTT
CCGGGAACTGCTGCTTCCCGCGAATCGCTACCGGCTGTTCATCGCCTTTA
CGATTCAGCTAGCGGCGCAACTTACCGGAAATACGTCCCTGGCGTATTAC
GCCACTCAAATCTTTACCGCCGTTGGTGCAGGAAACTCAAGTAAGCTGGT
GACAGGCTTTTTCGGTGTGGTCAAAGTGGTCGGTGTCTCTATCTTCCAGA
TTTTCGTTATGGATCGCATCGGTCGGCGATGGCCGTTCATGATTGGCGCC
GCCGCAATGGGATCGTTCATGCTCATCATTGCCTGCATTTTGGCCACGCA
TCCGACCAGCTCCAGCGACACCGGAAGCGCCTCGCCAGCTGGAATCGCCA
TGATTATCATGACATACTGTGAAGCATTCAGTTACAACATGTCCTGGGGC
CCTCTTCCCTGGCTGTACGTGGGAGAGATTTTTTCGAGCCGCACTCGTGA
AATTGGCGTGACCGTTGGCGCAGCGTCACAATGGCTTTTCAATTTCATGA
TGTCGCAGGTCACGCCGCATGCAATTGACAACATCGGATGGAGGATGTTT
CTAATGTTTGCGATTTTCAACTACGCGATAGTTGTATATTCTTATGTATT
TCTTAAGGAGATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGG
TGTCTGCCAGCTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTT
ATCAACCTCCAAATACTCTCTCGAGGAAATGCAAGGCGTCTTTGGTGGCA
GCGACCCTGCCAAGGATGATAAACTTACGACTACTGAAACGGCAGATAAG
ACACATACCAGCGAGGTTGAGGACAATCAAGGGACCAGCAGTGCAACGCC
AAAAGAAGGATAAGCGGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTT
CGGATACACAGTGGCTCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCA
TCCTCCAGGCAGGTGCCTTTTTCGGCTGCTTTTTCACGACACCCATCGCA
TCCTACCTAGGCCGCCGGCTCGGCCTCATCATCAGTTCCCTTGTATTTAC
CGTCGGTACCATCCTACAGGTCGTTAATTCGCATACTCTGGGGACGTTCT
ATGCTGGTCGAGTGATAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTT
ATTCCCGTGTATGCGGCTGAAATGTCTCCCAAGGACCTACGTGGCCGACT
CGGTTCCTGCTTCCAGTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACT
GGGTCACGTATGCTGTGTCGATAGACCAGCCGTCCGCAACAAAACAATGG
CAAATTGCGTTGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGG
TATGTGCACGGTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGA
TCGAGAAGGCTAGAGAGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACT
GAGGAGCTCCAGCAAGAATTCGATGAGATTTTGGCAGGTATTGAAGAAGA
AGCTCGAGTCAAACAAGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGA
ATCGCTACCGGCTGTTCATCGCCTTTACGATTCAGCTAGCGGCGCAACTT
ACCGGAAATACGTCCCTGGCGTATTACGCCACTCAAATCTTTACCGCCGT
TGGTGCAGGAAACTCAAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCA
AAGTGGTCGGTGTCTCTATCTTCCAGATTTTCGTTATGGATCGCATCGGT
CGGCGATGGCCGTTCATGATTGGCGCCGCCGCAATGGGATCGTTCATGCT
CATCATTGCCTGCATTTTGGCCACGCATCCGACCAGCTCCAGCGACACCG
GAAGCGCCTCGCCAGCTGGAATCGCCATGATTATCATGACATACTGTGAA
GCATTCAGTTACAACATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGG
AGAGATTTTTTCGAGCCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAG
CGTCACAATGGCTTTTCAATTTCATGATGTCGCAGGTCACGCCGCATGCA
ATTGACAACATCGGATGGAGGATGTTTCTAATGTTTGCGATTTTCAACTA
CGCGATAGTTGTATATTCTTATGTATTTCTTAAGGAGATGGGTCGGAAAT
TGGGCCTCTTCCGTGCTATCTATCTGGTGTCTGCCAGCTGCATGGGCTCT
TTTGCCTTTGCATTTGACACCGGTGTTATCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_23275CAN33_23275Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23275-T1CAN33_23275-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23275-T1.cdsCAN33_23275-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23275-T1.exon3CAN33_23275-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_23275-T1.exon2CAN33_23275-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_23275-T1.exon1CAN33_23275-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.5
NoteEggNog:ENOG41
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
ProductSugar (and other) transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:970387..972028 -
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