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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1006042..1006974+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_23335-T1 ID=CAN33_23335-T1|Name=CAN33_23335-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=933bp|location=Sequence derived from alignment at NKJJ01000002.1:1006042..1006974+ (Aspergillus niger FDAARGOS_311)
ATGGTCGGCTTTGACATGCGTGGCTTGACCCCGGCTCCGGTGACTCCCTT
CACGCCGGACGGTGCAGTCGACTACGAAGCTATCCACCGGCTTGGTTCTT
GGCTTGGGGGAATCGAAGGAGTGAAGGGACTGGTTGTGCTTGGTCACGCT
GGCGAAGGCACCTTTCTCACCACTGAAGAGCAAATCTCCGTCATCAAGGC
TTTTGTGAAGTCGGTGGACAACAAGATTCCAATCATTGCTGGAATCACTG
GTGAGGGCACCGAAGTGGCCGCATTAGAAGCGAAGCGTGCCAAAGAAGCT
GGCGCGGCTGCTGGCTTGCTCTACCCATCTCATGGCTGGCTGCGCTTCGG
ATATCAGCCCGGTGCTCCTCAAGATCGATACCGTCGTGTCTATGAGGTTT
CTGCTCTGCCGTTGATCCTTTTCCAATATCCAGACAACACCAAAGCAACC
TACAATCTGCAGACTATGCTTGATATTGCTGCTCAACCTGGATGTTTCGC
CATGAAGAACGGCGTGCGCAACATGCGCCGATGGGATACGGAAATTCCCG
TAATTCGGGCTCAGCGTCCTGACCTACAAATTCTTTCTTGTCACGATGAA
TACCTGTTGCACACTTCATTTGACGTCGACGGTTTCTTGGTGGGCTACGG
TAACATCGCTCCCGAGCCTCTAATTGAGCTTATCAAAGCTGGTAAAGCCA
AGGATTACATCAAGGCACGAGCTATCCATGATCAGCTCTTGCCGGTTACG
AAGAGTGTGTATCATCGAGGATCCCATATGGAGGGTACGGTCGCTCTCAA
ACATGCTCTTGTTGCTCGGGGGATTTTGACCCACGCCACTGTTCGCTCGC
CCCTGCTGCCCCTTGAGGATGGCGCAGAGCAGGAAATTCATGCTGCCGTC
AGTGCTGCGTCGCTCAACAAGGTGGCTTTTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1006042..1006974+ >CAN33_23335-T1 ID=CAN33_23335-T1|Name=CAN33_23335-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=933bp|location=Sequence derived from alignment at NKJJ01000002.1:1006042..1006974+ (Aspergillus niger FDAARGOS_311)
ATGGTCGGCTTTGACATGCGTGGCTTGACCCCGGCTCCGGTGACTCCCTT
CACGCCGGACGGTGCAGTCGACTACGAAGCTATCCACCGGCTTGGTTCTT
GGCTTGGGGGAATCGAAGGAGTGAAGGGACTGGTTGTGCTTGGTCACGCT
GGCGAAGGCACCTTTCTCACCACTGAAGAGCAAATCTCCGTCATCAAGGC
TTTTGTGAAGTCGGTGGACAACAAGATTCCAATCATTGCTGGAATCACTG
GTGAGGGCACCGAAGTGGCCGCATTAGAAGCGAAGCGTGCCAAAGAAGCT
GGCGCGGCTGCTGGCTTGCTCTACCCATCTCATGGCTGGCTGCGCTTCGG
ATATCAGCCCGGTGCTCCTCAAGATCGATACCGTCGTGTCTATGAGGTTT
CTGCTCTGCCGTTGATCCTTTTCCAATATCCAGACAACACCAAAGCAACC
TACAATCTGCAGACTATGCTTGATATTGCTGCTCAACCTGGATGTTTCGC
CATGAAGAACGGCGTGCGCAACATGCGCCGATGGGATACGGAAATTCCCG
TAATTCGGGCTCAGCGTCCTGACCTACAAATTCTTTCTTGTCACGATGAA
TACCTGTTGCACACTTCATTTGACGTCGACGGTTTCTTGGTGGGCTACGG
TAACATCGCTCCCGAGCCTCTAATTGAGCTTATCAAAGCTGGTAAAGCCA
AGGATTACATCAAGGCACGAGCTATCCATGATCAGCTCTTGCCGGTTACG
AAGAGTGTGTATCATCGAGGATCCCATATGGAGGGTACGGTCGCTCTCAA
ACATGCTCTTGTTGCTCGGGGGATTTTGACCCACGCCACTGTTCGCTCGC
CCCTGCTGCCCCTTGAGGATGGCGCAGAGCAGGAAATTCATGCTGCCGTC
AGTGCTGCGTCGCTCAACAAGGTGGCTTTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.6 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002220 |
| DBxref | PFAM:PF00701 |
| Product | Dihydrodipicolinate synthetase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1006042..1006974 + |
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