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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1075660..1077002- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_23440-T1 ID=CAN33_23440-T1|Name=CAN33_23440-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1343bp|location=Sequence derived from alignment at NKJJ01000002.1:1075660..1077002- (Aspergillus niger FDAARGOS_311)
ATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAG
TGCCAATGTTGTTCAAGGTGCTGCCCAGGGTTTCGCAGCCGGCGTCACTG
GCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTC
TCCCTGCTCGAGAGTGACGAACCCCAAGTCGTCGTACTCACCAAGACCTT
TGATTTCATCGGTACCGAGGGAACCACGACCGAGGATGGATGCGCGCCCT
GGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGT
GGTAAAAATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGG
CATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCG
TGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATC
GTGCAGAACATTAAGATTACGAACCTCAACCCTGGGTATGTATCATCCCA
GTAACTAGGAGTTCTCGAATGCTTTGGGAGACACACCATGTGTTCTAACG
TCTTTCACTACAGTTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGC
GCTGACCTGATCTGGATCGACCACTGCGAGGTAAGACAGAAATCTCCATC
ATCTGATAATCATGATTGAGTTTCTCACGTTGACTTATGGATTAGACCTC
CCTCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAACACCCGCA
TGACTTGGTCCAATAACTTCCTTAACGGCGTAACCACCCACTCCGCAGGC
TGTGATGACCACCACTACTGGACAATGGAGCTAGTTGGCCCTGGGGACGA
GATTACCTTCCAGAGTACGTGTCCCATGAAAACCTAAAAGAAGCATCTAT
TCAACTAACATACGTGTTCACTCACAGACAACTACGTCTACCACACCACC
GGCCGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAG
CGTCTGGTCTTCCATCCCCGGACACGCCATCGAGGGCGGTGACAAGGGCC
GCGGTCTTTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATCGCCCCC
GCCAAGCCCGAGAACCAACTCTTCAGCGCCAGTGAAGCCAACGCCGCATC
TTGCAAGTCCGCCTTGGGACGCGCTTGCCAGGCCAATGGCTATAGCAAAT
CTGGTGCTTTTGGCAGTTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGA
CTGACTATTGCACCGGCCGGCTCTGCGACCGACGCTCTCGCTTATGTTCC
TAAGAATTGTGGTATTGGGCGTCTTGAAAGCTGCGATGCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1075660..1077002- >CAN33_23440-T1 ID=CAN33_23440-T1|Name=CAN33_23440-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4548bp|location=Sequence derived from alignment at NKJJ01000002.1:1075660..1077002- (Aspergillus niger FDAARGOS_311)
ACAACTACGTCTACCACACCACCGGCCGTGGACCCGCTCTCTCCGGCACG
ACCCTCTTCCACGCAGTCAACAGCGTCTGGTCTTCCATCCCCGGACACGC
CATCGAGGGCGGTGACAAGGGCCGCGGTCTTTTCGAGGGATGCTTCTTCG
AAGATGTTGTCGAGATCGCCCCCGCCAAGCCCGAGAACCAACTCTTCAGC
GCCAGTGAAGCCAACGCCGCATCTTGCAAGTCCGCCTTGGGACGCGCTTG
CCAGGCCAATGGCTATAGCAAATCTGGTGCTTTTGGCAGTTCTGAAACTG
GCTTTTTCAAGGACTTTGCCGGACTGACTATTGCACCGGCCGGCTCTGCG
ACCGACGCTCTCGCTTATGTTCCTAAGAATTGTGGTATTGGGCGTCTTGA
AAGCTGCGATGCTTAGACCTCCCTCACCGGACGCCAACACTACGTGACCG
GCTTCCACCCCAACACCCGCATGACTTGGTCCAATAACTTCCTTAACGGC
GTAACCACCCACTCCGCAGGCTGTGATGACCACCACTACTGGACAATGGA
GCTAGTTGGCCCTGGGGACGAGATTACCTTCCAGATTTTGTCTGGGGTGG
CGACGCGTTTACTTTCTTTGGCGCTGACCTGATCTGGATCGACCACTGCG
AGATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCT
AGTGCCAATGTTGTTCAAGGTGCTGCCCAGGGTTTCGCAGCCGGCGTCAC
TGGCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTG
TCTCCCTGCTCGAGAGTGACGAACCCCAAGTCGTCGTACTCACCAAGACC
TTTGATTTCATCGGTACCGAGGGAACCACGACCGAGGATGGATGCGCGCC
CTGGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGT
GTGGTAAAAATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAAT
GGCATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGG
CGTGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCA
TCGTGCAGAACATTAAGATTACGAACCTCAACCCTGGACAACTACGTCTA
CCACACCACCGGCCGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACG
CAGTCAACAGCGTCTGGTCTTCCATCCCCGGACACGCCATCGAGGGCGGT
GACAAGGGCCGCGGTCTTTTCGAGGGATGCTTCTTCGAAGATGTTGTCGA
GATCGCCCCCGCCAAGCCCGAGAACCAACTCTTCAGCGCCAGTGAAGCCA
ACGCCGCATCTTGCAAGTCCGCCTTGGGACGCGCTTGCCAGGCCAATGGC
TATAGCAAATCTGGTGCTTTTGGCAGTTCTGAAACTGGCTTTTTCAAGGA
CTTTGCCGGACTGACTATTGCACCGGCCGGCTCTGCGACCGACGCTCTCG
CTTATGTTCCTAAGAATTGTGGTATTGGGCGTCTTGAAAGCTGCGATGCT
TAGACCTCCCTCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAA
CACCCGCATGACTTGGTCCAATAACTTCCTTAACGGCGTAACCACCCACT
CCGCAGGCTGTGATGACCACCACTACTGGACAATGGAGCTAGTTGGCCCT
GGGGACGAGATTACCTTCCAGATTTTGTCTGGGGTGGCGACGCGTTTACT
TTCTTTGGCGCTGACCTGATCTGGATCGACCACTGCGAGATGAAGGTCCC
CTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAGTGCCAATGTTG
TTCAAGGTGCTGCCCAGGGTTTCGCAGCCGGCGTCACTGGCGGCGGCGAT
ATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTCTCCCTGCTCGA
GAGTGACGAACCCCAAGTCGTCGTACTCACCAAGACCTTTGATTTCATCG
GTACCGAGGGAACCACGACCGAGGATGGATGCGCGCCCTGGGGTACTGGG
AAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGTGGTAAAAATCC
CGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGGCATTCATATCA
AGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCGTGCTCAGCGGA
AAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATCGTGCAGAACAT
TAAGATTACGAACCTCAACCCTGGACAACTACGTCTACCACACCACCGGC
CGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAGCGT
CTGGTCTTCCATCCCCGGACACGCCATCGAGGGCGGTGACAAGGGCCGCG
GTCTTTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATCGCCCCCGCC
AAGCCCGAGAACCAACTCTTCAGCGCCAGTGAAGCCAACGCCGCATCTTG
CAAGTCCGCCTTGGGACGCGCTTGCCAGGCCAATGGCTATAGCAAATCTG
GTGCTTTTGGCAGTTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGACTG
ACTATTGCACCGGCCGGCTCTGCGACCGACGCTCTCGCTTATGTTCCTAA
GAATTGTGGTATTGGGCGTCTTGAAAGCTGCGATGCTTAGACCTCCCTCA
CCGGACGCCAACACTACGTGACCGGCTTCCACCCCAACACCCGCATGACT
TGGTCCAATAACTTCCTTAACGGCGTAACCACCCACTCCGCAGGCTGTGA
TGACCACCACTACTGGACAATGGAGCTAGTTGGCCCTGGGGACGAGATTA
CCTTCCAGATTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGCTG
ACCTGATCTGGATCGACCACTGCGAGATGAAGGTCCCCTTCCTCCAACTT
CTCTGCCTAAATGCCGCCTTGGCTAGTGCCAATGTTGTTCAAGGTGCTGC
CCAGGGTTTCGCAGCCGGCGTCACTGGCGGCGGCGATATAACTCCCAGCT
ACCCCAAAACCAACGAGGAGCTTGTCTCCCTGCTCGAGAGTGACGAACCC
CAAGTCGTCGTACTCACCAAGACCTTTGATTTCATCGGTACCGAGGGAAC
CACGACCGAGGATGGATGCGCGCCCTGGGGTACTGGGAAGTCCTGCCAGC
TGGCCATCAACTCCAATGGATGGTGTGGTAAAAATCCCGTCGTAACCATC
ACGTATGATAACGCCGCCAAGAATGGCATTCATATCAAGTCCAACAAGAC
TCTTGTTGGTGAGGGAGACAAGGGCGTGCTCAGCGGAAAGGGTCTCTACT
TTGAGGGTGGTGTTTCCAATATCATCGTGCAGAACATTAAGATTACGAAC
CTCAACCCTGGACAACTACGTCTACCACACCACCGGCCGTGGACCCGCTC
TCTCCGGCACGACCCTCTTCCACGCAGTCAACAGCGTCTGGTCTTCCATC
CCCGGACACGCCATCGAGGGCGGTGACAAGGGCCGCGGTCTTTTCGAGGG
ATGCTTCTTCGAAGATGTTGTCGAGATCGCCCCCGCCAAGCCCGAGAACC
AACTCTTCAGCGCCAGTGAAGCCAACGCCGCATCTTGCAAGTCCGCCTTG
GGACGCGCTTGCCAGGCCAATGGCTATAGCAAATCTGGTGCTTTTGGCAG
TTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGACTGACTATTGCACCGG
CCGGCTCTGCGACCGACGCTCTCGCTTATGTTCCTAAGAATTGTGGTATT
GGGCGTCTTGAAAGCTGCGATGCTTAGACCTCCCTCACCGGACGCCAACA
CTACGTGACCGGCTTCCACCCCAACACCCGCATGACTTGGTCCAATAACT
TCCTTAACGGCGTAACCACCCACTCCGCAGGCTGTGATGACCACCACTAC
TGGACAATGGAGCTAGTTGGCCCTGGGGACGAGATTACCTTCCAGATTTT
GTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGCTGACCTGATCTGGAT
CGACCACTGCGAGATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATG
CCGCCTTGGCTAGTGCCAATGTTGTTCAAGGTGCTGCCCAGGGTTTCGCA
GCCGGCGTCACTGGCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAA
CGAGGAGCTTGTCTCCCTGCTCGAGAGTGACGAACCCCAAGTCGTCGTAC
TCACCAAGACCTTTGATTTCATCGGTACCGAGGGAACCACGACCGAGGAT
GGATGCGCGCCCTGGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTC
CAATGGATGGTGTGGTAAAAATCCCGTCGTAACCATCACGTATGATAACG
CCGCCAAGAATGGCATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAG
GGAGACAAGGGCGTGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGT
TTCCAATATCATCGTGCAGAACATTAAGATTACGAACCTCAACCCTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_4 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | Pectate lyase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1075660..1077002 - |
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