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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1186233..1187645+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_23605-T1 ID=CAN33_23605-T1|Name=CAN33_23605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1413bp|location=Sequence derived from alignment at NKJJ01000002.1:1186233..1187645+ (Aspergillus niger FDAARGOS_311)
ATGCATCAACACCCCCGATCTCCGGCGCCTGCGGCGCCTCCCTCCGCATC
CAGGCCGGGCGCAAACCGCTCCGATGACCGCCCGAACTCTCCAGCTTTCG
ACCCCAGGGTACAACTTACACGGGGATTGGGCATAGAGACGGAGGCTAGG
TCATCTGGACAGACATCCAGTTCACGCCCAGCGAAAGAAGCAATATCGAA
GCTCAATCAGCTCGTAACGGTATGGCTTGGAATCGGCTTCTAGTCCCCTT
ATCTTTGTTACAAAGGGCCCATTGATTAATCGTATTTTGCGTCTAGAATT
ATCACACAAAAGCTGCTCTAGTAATACTGGCTTCCCGGATCGACTTAACT
CGCTCAGACGATACACCGAAAATAAATCCCAAAGTCAATCGATGGGTATG
CTACGTCCCCACATATGCTGAGCCTCTGCTTCCCATCAATTGTGCCAAGT
AACCATATACCCTGCTAACTACTATGCTCCATCTCCTAGTTCGCCATCGA
TTTAGAAGATATTGACGCCATCCGAGAGCAGCTTCGGTTTTGGCGGATAA
ACGACGTTAGCGAACAACCGCCTCCGCCGTTGATCATTGAGACGTATCTG
GATACGAAAGATCTGACGAATAACCAGAGTCTCGTTGCCTTGGATGAGCA
AGGGAAACGATTCGATGTTCTGGAATCTCTTTCTAGGTCTTCAGAGGCAC
ATGCCAAGGGGCCGGTATCGTCCAGGTCCGAGGATGTTATTCTAGAGCGA
TGGAGAGTGGAACTGGGGAATACGCCGAACAAGGCACTACCGGCAGATCT
TGGCTCTATTCTGCCAAAAATATATAAACAGAGTATCGTGACGTTCAGGA
CATTGTTCACCTACTCCAAGTTGTTACCCGCGTGGAAGCTCGCGAAGCGC
AACGGGAGGCTTCATGCGCACCCGGCGCTTCAGATCCGGTATCGTATCTT
GGCTGGGAAACCCAATCCGGACGACTCCAGGCCGGATCGCCTGACTACGC
CACTGTTTGACAGCAGTAATAAGGTGGTCGAAACGTATACCTTTGGGACC
ACGGAGTCGCCGGTCGGATACCTGTCCATCCAAGTGACCTATCGAACGAG
CTGTGAGTTTCGAGTGGACGATTCGGAGGCCCTCCTGAGTTCACGATTCA
TGGGGGCCGATGACGAGGTCTTTCGCCCTTCACTTCCAAGCAGGGAATCC
AACCTCAAGGCCGCCAATTCCGGGGTCGGATCAGCTCCTGTCGAGAAACG
AACTGTCGAAGACCCTGACCCAAGTCGAGCTTATGGGAGTCTTTCAACGT
TCCACCATGTCGGCCCTACGACCAGTGCGAGTCCAATATCAGCTCTTCGC
GCCGCCCGCGAATCAGGAGCTGCGTCACCATCCCCCCGAGTTCCTCTTCC
CGGAAGCCTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1186233..1187645+ >CAN33_23605-T1 ID=CAN33_23605-T1|Name=CAN33_23605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2286bp|location=Sequence derived from alignment at NKJJ01000002.1:1186233..1187645+ (Aspergillus niger FDAARGOS_311)
ATGCATCAACACCCCCGATCTCCGGCGCCTGCGGCGCCTCCCTCCGCATC
CAGGCCGGGCGCAAACCGCTCCGATGACCGCCCGAACTCTCCAGCTTTCG
ACCCCAGGGTACAACTTACACGGGGATTGGGCATAGAGACGGAGGCTAGG
TCATCTGGACAGACATCCAGTTCACGCCCAGCGAAAGAAGCAATATCGAA
GCTCAATCAGCTCGTAACGTTCGCCATCGATTTAGAAGATATTGACGCCA
TCCGAGAGCAGCTTCGGTTTTGGCGGATAAACGACGTTAGCGAACAACCG
CCTCCGCCGTTGATCATTGAGACGTATCTGGATACGAAAGATCTGACGAA
TAACCAGAGTCTCGTTGCCTTGGATGAGCAAGGGAAACGATTCGATGTTC
TGGAATCTCTTTCTAGGTCTTCAGAGGCACATGCCAAGGGGCCGGTATCG
TCCAGGTCCGAGGATGTTATTCTAGAGCGATGGAGAGTGGAACTGGGGAA
TACGCCGAACAAGGCACTACCGGCAGATCTTGGCTCTATTCTGCCAAAAA
TATATAAACAGAGTATCGTGACGTTCAGGACATTGTTCACCTACTCCAAG
TTGTTACCCGCGTGGAAGCTCGCGAAGCGCAACGGGAGGCTTCATGCGCA
CCCGGCGCTTCAGATCCGGTATCGTATCTTGGCTGGGAAACCCAATCCGG
ACGACTCCAGGCCGGATCGCCTGACTACGCCACTGTTTGACAGCAGTAAT
AAGGTGGTCGAAACGTATACCTTTGGGACCACGGAGTCGCCGGTCGGATA
CCTGTCCATCCAAGTGACCTATCGAACGAGCTGTGAGTTTCGAGTGGACG
ATTCGGAGGCCCTCCTGAGTTCACGATTCATGGGGGCCGATGACGAGGTC
TTTCGCCCTTCACTTCCAAGCAGGGAATCCAACCTCAAGGCCGCCAATTC
CGGGGTCGGATCAGCTCCTGTCGAGAAACGAACTGTCGAAGACCCTGACC
CAAGTCGAGCTTATGGGAGTCTTTCAACGTTCCACCATGTCGGCCCTACG
ACCAGTGCGAGTCCAATATCAGCTCTTCGCGCCGCCCGCGAATCAGGAGC
TGCGTCACCATCCCCCCGAGTTCCTCTTCCCGGAAGCCTGTAGATGCATC
AACACCCCCGATCTCCGGCGCCTGCGGCGCCTCCCTCCGCATCCAGGCCG
GGCGCAAACCGCTCCGATGACCGCCCGAACTCTCCAGCTTTCGACCCCAG
GGTACAACTTACACGGGGATTGGGCATAGAGACGGAGGCTAGGTCATCTG
GACAGACATCCAGTTCACGCCCAGCGAAAGAAGCAATATCGAAGCTCAAT
CAGCTCGTAACGTTCGCCATCGATTTAGAAGATATTGACGCCATCCGAGA
GCAGCTTCGGTTTTGGCGGATAAACGACGTTAGCGAACAACCGCCTCCGC
CGTTGATCATTGAGACGTATCTGGATACGAAAGATCTGACGAATAACCAG
AGTCTCGTTGCCTTGGATGAGCAAGGGAAACGATTCGATGTTCTGGAATC
TCTTTCTAGGTCTTCAGAGGCACATGCCAAGGGGCCGGTATCGTCCAGGT
CCGAGGATGTTATTCTAGAGCGATGGAGAGTGGAACTGGGGAATACGCCG
AACAAGGCACTACCGGCAGATCTTGGCTCTATTCTGCCAAAAATATATAA
ACAGAGTATCGTGACGTTCAGGACATTGTTCACCTACTCCAAGTTGTTAC
CCGCGTGGAAGCTCGCGAAGCGCAACGGGAGGCTTCATGCGCACCCGGCG
CTTCAGATCCGGTATCGTATCTTGGCTGGGAAACCCAATCCGGACGACTC
CAGGCCGGATCGCCTGACTACGCCACTGTTTGACAGCAGTAATAAGGTGG
TCGAAACGTATACCTTTGGGACCACGGAGTCGCCGGTCGGATACCTGTCC
ATCCAAGTGACCTATCGAACGAGCTGTGAGTTTCGAGTGGACGATTCGGA
GGCCCTCCTGAGTTCACGATTCATGGGGGCCGATGACGAGGTCTTTCGCC
CTTCACTTCCAAGCAGGGAATCCAACCTCAAGGCCGCCAATTCCGGGGTC
GGATCAGCTCCTGTCGAGAAACGAACTGTCGAAGACCCTGACCCAAGTCG
AGCTTATGGGAGTCTTTCAACGTTCCACCATGTCGGCCCTACGACCAGTG
CGAGTCCAATATCAGCTCTTCGCGCCGCCCGCGAATCAGGAGCTGCGTCA
CCATCCCCCCGAGTTCCTCTTCCCGGAAGCCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:1990316 | Atg1/ULK1 kinase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006914 | autophagy |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036570 |
| DBxref | InterPro:IPR018731 |
| DBxref | PFAM:PF10033 |
| Product | autophagy protein 13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1186233..1187645 + |
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