You are here

CAN33_23610-T1, CAN33_23610-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_23610-T1
Unique NameCAN33_23610-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1187816..1189279+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_23610-T1 ID=CAN33_23610-T1|Name=CAN33_23610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1464bp|location=Sequence derived from alignment at NKJJ01000002.1:1187816..1189279+ (Aspergillus niger FDAARGOS_311)
ATGACTCGCCCTCAATTCCCAGAGTCGAAGAACATGCCACCGCCATCCAT GGCAGCTTCCGCTCGCAAATCCTTACCCTTGCCCGGGGCTTCTGAGACCA CAGCTACTTCTTCAAACTCGGCATCGCCTCGGCCTACACCAATCGCAAGG TACAGTAGCGCCTTCACCCATCGACGCGGGAGGCCTTCTTCGGGCAACAT CAACAGAATAGACGACGAAAACTCGAGTGGCAAGACCAGTGCAACGTCTT CCAACCCTCAACCTGGGTCAGGCTTACTTGCTGAAGCCACGGGGACAAGT GCAGATTCCATTCATGCAGACGATGAGAATATTACGGAGTTCCTGAAGAT GCTAGACTTGAGGAAAGATCTCCTGAGAACATCAAACTCGGCTTCTGCTG ATGTGACTGCACGCCGGACAACGGCTACTTCGGCTGCGTTGACCCGGTTT CAGCGAATGAGAGATTCGAACGCACAACTGTCGGAGTCAATGTCATCTTC TATGCTCTTGCAGCGTTCGTCGACCTCTTCGAGCAAGCAGCTCTCAGGGG TGCCTCCCATGGTGGCTGGTACTTCGATTTCGACGGCCTCTTCTCCGGGA AAGCCCATTTCACCCCACACCCCACATACTCCGGCCATTCCGTCTCGCCT TAGCTCTAACAGCATTGTTGACTATGGCAACGAGAGAGGTCGCGAGCAAC CCTCCTCGGTCGGAGATTACACTCCTGAGGGTCCGACCATACCTCATCGC CCGTCCGTCGTGACGGTAAATGCGATTGATATTCCTACGTCACCAGGGTT GCCCTTCCCGCCTTATCGTCGGCCCAGCTCTGCTGCTCCGCCCCCTCCAC CAGTTGCGACCGATGATGATGAGATTTTCCCCTTCAATCTGCGCAGCGTA AGTCTCGGGGCTGAGGAGAGATCTCACAACAGCTTAAGTGCCCTACAGAG ACAGCATGACCTGGAAGGGGCTAAATCAAACACCCAGCCAACGCGCAGAG AACAGCGTCCCCCTTTGGCTAGCGAAGATCCGAGCCGAAGGTCGAGCTCA ACGGGGCATGGAACAAGCCCCCACAAGCGAACTTCATTGTCAGGGCCAAC AGTAGCACCGTCGCCGTCGAACAATCATGTCTACCAACCACGCTTCAGCC TTTGTCGGGGGCGAGGACTGTCCGGTGGGCCGCACTCTCTCAGCTCCGGC TCGAGTAGCCTTGCGCGCGGTGCTCCTTCTGATCTCGCTGAGCGCGATCA TGATCGTGATGTCAATGCGAGTGGCAGTAATAGCGGCACCTCGACTGTTG AAGATCGTCGGGCAGCTGGGCGACGGCCTAGTTCGGGCCGCAATATTCCT CCGCCATCACAAGTTGAAGAGGACGAGCCGCTATTATTTGCTATGAGCGA TTTCGGGGCCTCCCGGCGAAGCTTCGAAGAAGGCAGACATGGCAACCATG GTAGGCGACTCTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:1187816..1189279+

>CAN33_23610-T1 ID=CAN33_23610-T1|Name=CAN33_23610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1464bp|location=Sequence derived from alignment at NKJJ01000002.1:1187816..1189279+ (Aspergillus niger FDAARGOS_311)
ATGACTCGCCCTCAATTCCCAGAGTCGAAGAACATGCCACCGCCATCCAT
GGCAGCTTCCGCTCGCAAATCCTTACCCTTGCCCGGGGCTTCTGAGACCA
CAGCTACTTCTTCAAACTCGGCATCGCCTCGGCCTACACCAATCGCAAGG
TACAGTAGCGCCTTCACCCATCGACGCGGGAGGCCTTCTTCGGGCAACAT
CAACAGAATAGACGACGAAAACTCGAGTGGCAAGACCAGTGCAACGTCTT
CCAACCCTCAACCTGGGTCAGGCTTACTTGCTGAAGCCACGGGGACAAGT
GCAGATTCCATTCATGCAGACGATGAGAATATTACGGAGTTCCTGAAGAT
GCTAGACTTGAGGAAAGATCTCCTGAGAACATCAAACTCGGCTTCTGCTG
ATGTGACTGCACGCCGGACAACGGCTACTTCGGCTGCGTTGACCCGGTTT
CAGCGAATGAGAGATTCGAACGCACAACTGTCGGAGTCAATGTCATCTTC
TATGCTCTTGCAGCGTTCGTCGACCTCTTCGAGCAAGCAGCTCTCAGGGG
TGCCTCCCATGGTGGCTGGTACTTCGATTTCGACGGCCTCTTCTCCGGGA
AAGCCCATTTCACCCCACACCCCACATACTCCGGCCATTCCGTCTCGCCT
TAGCTCTAACAGCATTGTTGACTATGGCAACGAGAGAGGTCGCGAGCAAC
CCTCCTCGGTCGGAGATTACACTCCTGAGGGTCCGACCATACCTCATCGC
CCGTCCGTCGTGACGGTAAATGCGATTGATATTCCTACGTCACCAGGGTT
GCCCTTCCCGCCTTATCGTCGGCCCAGCTCTGCTGCTCCGCCCCCTCCAC
CAGTTGCGACCGATGATGATGAGATTTTCCCCTTCAATCTGCGCAGCGTA
AGTCTCGGGGCTGAGGAGAGATCTCACAACAGCTTAAGTGCCCTACAGAG
ACAGCATGACCTGGAAGGGGCTAAATCAAACACCCAGCCAACGCGCAGAG
AACAGCGTCCCCCTTTGGCTAGCGAAGATCCGAGCCGAAGGTCGAGCTCA
ACGGGGCATGGAACAAGCCCCCACAAGCGAACTTCATTGTCAGGGCCAAC
AGTAGCACCGTCGCCGTCGAACAATCATGTCTACCAACCACGCTTCAGCC
TTTGTCGGGGGCGAGGACTGTCCGGTGGGCCGCACTCTCTCAGCTCCGGC
TCGAGTAGCCTTGCGCGCGGTGCTCCTTCTGATCTCGCTGAGCGCGATCA
TGATCGTGATGTCAATGCGAGTGGCAGTAATAGCGGCACCTCGACTGTTG
AAGATCGTCGGGCAGCTGGGCGACGGCCTAGTTCGGGCCGCAATATTCCT
CCGCCATCACAAGTTGAAGAGGACGAGCCGCTATTATTTGCTATGAGCGA
TTTCGGGGCCTCCCGGCGAAGCTTCGAAGAAGGCAGACATGGCAACCATG
GTAGGCGACTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG13_2CAN33_23610Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23610-T1.exon1CAN33_23610-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23610-T1.cdsCAN33_23610-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23610-T1CAN33_23610-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
Productautophagy protein 13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1187816..1189279 +