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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1234452..1235968- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_23675-T1 ID=CAN33_23675-T1|Name=CAN33_23675-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1517bp|location=Sequence derived from alignment at NKJJ01000002.1:1234452..1235968- (Aspergillus niger FDAARGOS_311)
ATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCTTTGGAGGA
CCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAGCGTCCTG
CGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGAGGCGTATGCCGATGTG
AAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACACCGTGGT
CCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAGACACAACCCATTCAGT
CGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCAACATCGT
CCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCTCCAGCCA
GGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCCCAGATCC
GTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCGTGGTGCC
GTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTGCGAAGGT
GAGTTTGAACACGATACGGTTCGATTTTTCTACTGTCTTTGCTAACCCGG
ATGCTAGGCCTTTGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTG
ATGCCCCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATT
CCCCATATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCG
AGAGATCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCC
TTCCCCTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCA
GTGCACATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGAC
AGAACGCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCG
GTCCTGCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCT
CAGCCCGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCA
CCCTCACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCC
AGGGCCCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGT
GCTACTCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCC
CTACGGTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGC
CTGCCGCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAG
ATCTACATCCCCAACGACATGGTTGGCGCTATCATTGGAAAGGGAGGAGC
CAAGATCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACG
AGCCCCAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAG
GAGTGCAATCAGATGGCGCTCTACATGCTCTACTCGAGACTTGGTTAGTA
TCCTTCCCAAACGATGTGAAATGACCCCTTCTAACATCCTGCAGAAAGCG
AGAAGCATCGGATCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1234452..1235968- >CAN33_23675-T1 ID=CAN33_23675-T1|Name=CAN33_23675-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4221bp|location=Sequence derived from alignment at NKJJ01000002.1:1234452..1235968- (Aspergillus niger FDAARGOS_311)
AAAGCGAGAAGCATCGGATCTAGGCCTTTGGTCTTATTATTCGTACCTTG
AACAATGAGCCCCTTGATGCCCCTTCTACTGCCCAATCCAAGACATACCC
CTTGCGTTTGTTGATTCCCCATATTCTCATTGGCTCGATCATTGGCAAGG
GTGGGAGCCGTATTCGAGAGATCCAGGACGCCTCTGGTGCACGTCTCAAC
GCTTCTGATGCTTGCCTTCCCCTGTCTACTGAACGGTCCCTTGTTATTCT
CGGTGTTGCTGACGCAGTGCACATCGCTACCTACTACGTTGCCGTGACTC
TCGTCGAGCAGCTGACAGAACGCTTCGGCGGCCCCGCTGCCTCGGCCTAT
GCCACCCGCAGCGGCGGTCCTGCTGGCGCTGTGCCTGGCGGCATGCAGGT
TGTGCCGTACGTGCCTCAGCCCGCTGGTGGGCAGTACGGCCATCCCGACA
CCTTCAAGCGTCACCACCCTCACCCCAACCGCGGCGCAGCTGGCGGCTAT
GGCGTTCCTTACCTCCAGGGCCCGGCAGCGCAAACTCCTGTAGCCCAGCC
CTCGATGCCCTACGGTGCTACTCCCCACACCCCGTATGCTGGCGCTGGCC
CGCACCAGCCCGCGCCCTACGGTGCGCCTCAGGCGGCCGCCGCACAGGCT
CGTGGTGGGCCGACGCCTGCCGCTCCCGTCGGCGGTGTCATGCCCGGCCA
GCCACTGACCCAGCAGATCTACATCCCCAACGACATGGTTGGCGCTATCA
TTGGAAAGGGAGGAGCCAAGATCAACGAGATCCGTCACCTGAGTGGCAGT
GTCATCAAGATCAACGAGCCCCAGGAGAACAGCAACGAGCGTCTGGTCAC
GATCACCGGTACCCAGGAGTGCAATCAGATGGCGCTCTACATGCTCTACT
CGAGACTTGATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCC
TTTGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCA
AGCGTCCTGCGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGAGGCGTAT
GCCGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGA
CACCGTGGTCCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAGACACAAC
CCATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAG
CAACATCGTCCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAAT
CTCCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTAT
CCCAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCC
CGTGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGC
TGCGAAGAAAGCGAGAAGCATCGGATCTAGGCCTTTGGTCTTATTATTCG
TACCTTGAACAATGAGCCCCTTGATGCCCCTTCTACTGCCCAATCCAAGA
CATACCCCTTGCGTTTGTTGATTCCCCATATTCTCATTGGCTCGATCATT
GGCAAGGGTGGGAGCCGTATTCGAGAGATCCAGGACGCCTCTGGTGCACG
TCTCAACGCTTCTGATGCTTGCCTTCCCCTGTCTACTGAACGGTCCCTTG
TTATTCTCGGTGTTGCTGACGCAGTGCACATCGCTACCTACTACGTTGCC
GTGACTCTCGTCGAGCAGCTGACAGAACGCTTCGGCGGCCCCGCTGCCTC
GGCCTATGCCACCCGCAGCGGCGGTCCTGCTGGCGCTGTGCCTGGCGGCA
TGCAGGTTGTGCCGTACGTGCCTCAGCCCGCTGGTGGGCAGTACGGCCAT
CCCGACACCTTCAAGCGTCACCACCCTCACCCCAACCGCGGCGCAGCTGG
CGGCTATGGCGTTCCTTACCTCCAGGGCCCGGCAGCGCAAACTCCTGTAG
CCCAGCCCTCGATGCCCTACGGTGCTACTCCCCACACCCCGTATGCTGGC
GCTGGCCCGCACCAGCCCGCGCCCTACGGTGCGCCTCAGGCGGCCGCCGC
ACAGGCTCGTGGTGGGCCGACGCCTGCCGCTCCCGTCGGCGGTGTCATGC
CCGGCCAGCCACTGACCCAGCAGATCTACATCCCCAACGACATGGTTGGC
GCTATCATTGGAAAGGGAGGAGCCAAGATCAACGAGATCCGTCACCTGAG
TGGCAGTGTCATCAAGATCAACGAGCCCCAGGAGAACAGCAACGAGCGTC
TGGTCACGATCACCGGTACCCAGGAGTGCAATCAGATGGCGCTCTACATG
CTCTACTCGAGACTTGATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCA
AGCGTCCTTTGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCG
GAAGCCAAGCGTCCTGCGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGA
GGCGTATGCCGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGATGGCC
AGGGCGACACCGTGGTCCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAG
ACACAACCCATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGTGCCCA
ATCCGAGCAACATCGTCCCCAGGATGAGTCTAGCTGGATTCACATTCGGG
CTGTAATCTCCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAG
AACGTATCCCAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGA
CTATTCCCGTGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGG
ATGCTGCTGCGAAGAAAGCGAGAAGCATCGGATCTAGGCCTTTGGTCTTA
TTATTCGTACCTTGAACAATGAGCCCCTTGATGCCCCTTCTACTGCCCAA
TCCAAGACATACCCCTTGCGTTTGTTGATTCCCCATATTCTCATTGGCTC
GATCATTGGCAAGGGTGGGAGCCGTATTCGAGAGATCCAGGACGCCTCTG
GTGCACGTCTCAACGCTTCTGATGCTTGCCTTCCCCTGTCTACTGAACGG
TCCCTTGTTATTCTCGGTGTTGCTGACGCAGTGCACATCGCTACCTACTA
CGTTGCCGTGACTCTCGTCGAGCAGCTGACAGAACGCTTCGGCGGCCCCG
CTGCCTCGGCCTATGCCACCCGCAGCGGCGGTCCTGCTGGCGCTGTGCCT
GGCGGCATGCAGGTTGTGCCGTACGTGCCTCAGCCCGCTGGTGGGCAGTA
CGGCCATCCCGACACCTTCAAGCGTCACCACCCTCACCCCAACCGCGGCG
CAGCTGGCGGCTATGGCGTTCCTTACCTCCAGGGCCCGGCAGCGCAAACT
CCTGTAGCCCAGCCCTCGATGCCCTACGGTGCTACTCCCCACACCCCGTA
TGCTGGCGCTGGCCCGCACCAGCCCGCGCCCTACGGTGCGCCTCAGGCGG
CCGCCGCACAGGCTCGTGGTGGGCCGACGCCTGCCGCTCCCGTCGGCGGT
GTCATGCCCGGCCAGCCACTGACCCAGCAGATCTACATCCCCAACGACAT
GGTTGGCGCTATCATTGGAAAGGGAGGAGCCAAGATCAACGAGATCCGTC
ACCTGAGTGGCAGTGTCATCAAGATCAACGAGCCCCAGGAGAACAGCAAC
GAGCGTCTGGTCACGATCACCGGTACCCAGGAGTGCAATCAGATGGCGCT
CTACATGCTCTACTCGAGACTTGATGTCTGCCTCTCCGTCTGCGTTGCAA
TCGACCAAGCGTCCTTTGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGA
TCAGCCGGAAGCCAAGCGTCCTGCGTTGGACAAAGTAGTAAAGGGTGATG
AGTCCGAGGCGTATGCCGATGTGAAAACGGATGCGCCGGCTGCGACTGCT
GATGGCCAGGGCGACACCGTGGTCCCCGATGCTCCCAACTCCAAGGGCGC
TCAGGAGACACAACCCATTCAGTCGACGGCCTCTCACGCCGAGTCGACCG
GTGCCCAATCCGAGCAACATCGTCCCCAGGATGAGTCTAGCTGGATTCAC
ATTCGGGCTGTAATCTCCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGG
TGGGGAGAACGTATCCCAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCG
TCAGCGACTATTCCCGTGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGC
CCCCAGGATGCTGCTGCGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004088 |
| DBxref | InterPro:IPR036612 |
| DBxref | InterPro:IPR004087 |
| DBxref | PFAM:PF00013 |
| Product | KH domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1234452..1235968 - |
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