You are here

Home

CAN33_23895-T1, CAN33_23895-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_23895-T1
Unique NameCAN33_23895-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1381562..1383364+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_23895-T1 ID=CAN33_23895-T1|Name=CAN33_23895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1803bp|location=Sequence derived from alignment at NKJJ01000002.1:1381562..1383364+ (Aspergillus niger FDAARGOS_311)
ATGCCGCGCAAGAAGGCTGCAGACCGCGTGGGTCCGGTCAAGACCCGAAG
CCGCAGTGGCTGTAAAGAATGCCGCGCCAGTCGAGTCCGCTGCGATCTGA
AGAAACCGATCTGCACCAGGTGCCTTGAGAAGGGCCTAGTATGCTCGACC
CAACTCGTTCTCAAGTGGGAGTCCGAGTTCGTTAGCCGCGGCTTGGCTTT
TGGTAGAGCCGGCGTTTGGAGTAAGGCTCGGGCTGCCGGCGGACTCCCTC
CTCCTCCTGGAAAGTCTTCGGCTTCGTTCCTCCTTCGCGATCAGGAATGG
TGTCCTATTCCCCTTATCGAGTCGTGGGGCTTCGTCAATAGTGGGGTTTC
GACTTTTGAACAGCCTTATGAGGTTAATGTTGCCTGTGATGAGTTGAATG
CTCTTGTCGTCCGGGACAAGGGCAAGAGCCCGGCGCTGGATGACTTGCTA
GATGAGAATCCAGAGTGGTCTTTATCACCCTCATCGTTGTCGTCTCCATT
CTCGATACGTGAGACTTCCGACTACTGCTCGCCTGTCCCACTTGTCTCTC
CGCACCTGACCCCGCCTTTATCGATGTTCCCCAGTCTCTCAGACTCCAAT
CAGGGTCTCCTCTTTGATTACTATCTCCAGCAAGTGTGTCCCCGGACCAC
CGCTAGCTCGAAGCTATCCTCTCCTTTTGCTTCTATCATCCTCCCCTTCT
GCATGTCCGCATCTCCAATCCTATTCAAAGCCATTCAGGCTCTTGGAGCA
TGTCACTGGTCACGCTTCGACTCAACCTACAGTGTCATCGGCCTCCGCCT
CAAATCAGAAGCCCTACGAGGCCTCCGCCACCGTCTTTCAACCGAAGGCT
CCCTCCTCTGCTCCGCAGACCCCGAGGTCCTAGCGATCATGATGATGCTA
TGCCTCTACGAAATCGTCGACAACTGCGACCAACGCTGGACGATCCACTT
AAAAGGCGCCAAAGAATTGATCCGCATCCGCCGGCAGCAACAACAACTAA
CTTCCTCCCGACCCCGTCAATCTCTTGACCCCGTCTCAGCCTTCGCCGAG
CTCTTCTTCGCCTTTCAAGACGTCATGGGCCGCACCGCCTGCGGCGAAGA
AGTCCTCTTCGGATCCGACTACTGGCAAGAAAACAACCGCCACATCGACC
TCTGGATGGGCTGCAGCCCCGAACTTGTCTCCATCCTCTCCTCAATTACA
GAAATGAGCCGCACCAGGCGCCAACTCACCTCCGATGCTGCCCGCAAAGC
ATTCTCTCACCGCGCCGCCTCCCTAGGCCGCAGACTCGAGAACCTCGTTC
AGGAAACAACTGACGACGACAACGACACCGACGACGGAAGTCTTCGCTCC
GCCGCCGAATTGAAACGTCTAGCAGCCGTGCTATACCTCCACTGCGCACT
GTACGGTGCATCGCCATCTACACCACTGGTAATTAACTATGTCCGACGCA
TCCTGCGTCTAGTCTCTGACCTGCTCGACTCCGGCTCCCTCGTCAGCATG
ACCTGGCCTGTGTTCGTAGCGGCGGTCGAGCTGGATCCACTTCATGATGA
GGTCTGGCGTGATGACACCGGCGAGAGCGTGGTATATGGTCGGCCGCTGG
TGTTGCGTGCATTGGCGGCTATGGCGGAATCAAGTGTGTCGAATGTGGCA
AGGACGAGAGCCGTCATTGTGAAGATTTGGCAAGCGAGGGATAGCGATAT
GCTTAAGGGCTCGCCGGTGGATGCAGCGGATGATGGCGTTGCGGGGTGTA
ATGATTGGGAGTGGTATGTTGCGCCGATTAGTACAGCGATGAGTTTGGCT
TGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:1381562..1383364+

>CAN33_23895-T1 ID=CAN33_23895-T1|Name=CAN33_23895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5175bp|location=Sequence derived from alignment at NKJJ01000002.1:1381562..1383364+ (Aspergillus niger FDAARGOS_311)
ATGCCGCGCAAGAAGGCTGCAGACCGCGTGGGTCCGGTCAAGACCCGAAG
CCGCAGTGGCTGTAAAGAATGCCGCGCCAGTCGAGTCCGCTGCGATCTGA
AGAAACCGATCTGCACCAGGTGCCTTGAGAAGGGCCTAGTATGCTCGACC
CAACTCGTTCTCAAGTGGGAGTCCGAGTTCGTTAGCCGCGGCTTGGCTTT
TGGTAGAGCCGGCGTTTGGAGTAAGGCTCGGGCTGCCGGCGGACTCCCTC
CTCCTCCTGGAAAGTCTTCGGCTTCGTTCCTCCTTCGCGATCAGGAATGG
TGTCCTATTCCCCTTATCGAGTCGTGGGGCTTCGTCAATAGTGGGGTTTC
GACTTTTGAACAGCCTTATGAGGTTAATGTTGCCTGTGATGAGTTGAATG
CTCTTGTCGTCCGGGACAAGGGCAAGAGCCCGGCGCTGGATGACTTGCTA
GATGAGAATCCAGAGTGGTCTTTATCACCCTCATCGTTGTCGTCTCCATT
CTCGATACGTGAGACTTCCGACTACTGCTCGCCTGTCCCACTTGTCTCTC
CGCACCTGACCCCGCCTTTATCGATGTTCCCCAGTCTCTCAGACTCCAAT
CAGGGTCTCCTCTTTGATTACTATCTCCAGCAAGTGTGTCCCCGGACCAC
CGCTAGCTCGAAGCTATCCTCTCCTTTTGCTTCTATCATCCTCCCCTTCT
GCATGTCCGCATCTCCAATCCTATTCAAAGCCATTCAGGCTCTTGGAGCA
TGTCACTGGTCACGCTTCGACTCAACCTACAGTGTCATCGGCCTCCGCCT
CAAATCAGAAGCCCTACGAGGCCTCCGCCACCGTCTTTCAACCGAAGGCT
CCCTCCTCTGCTCCGCAGACCCCGAGGTCCTAGCGATCATGATGATGCTA
TGCCTCTACGAAATCGTCGACAACTGCGACCAACGCTGGACGATCCACTT
AAAAGGCGCCAAAGAATTGATCCGCATCCGCCGGCAGCAACAACAACTAA
CTTCCTCCCGACCCCGTCAATCTCTTGACCCCGTCTCAGCCTTCGCCGAG
CTCTTCTTCGCCTTTCAAGACGTCATGGGCCGCACCGCCTGCGGCGAAGA
AGTCCTCTTCGGATCCGACTACTGGCAAGAAAACAACCGCCACATCGACC
TCTGGATGGGCTGCAGCCCCGAACTTGTCTCCATCCTCTCCTCAATTACA
GAAATGAGCCGCACCAGGCGCCAACTCACCTCCGATGCTGCCCGCAAAGC
ATTCTCTCACCGCGCCGCCTCCCTAGGCCGCAGACTCGAGAACCTCTCTT
CGCTCCGCCGCCGAATTGAAACGTCTAGCAGCCGTGCTATACCTCCACTG
CGCACTGTACGGTGCATCGCCATCTACACCACTGTCTCTGACCTGCTCGA
CTCCGGCTCCCTCGTCAGCATGACCTGGCCTGTGTTCGTAGCGGCGGTCG
AGCTGGATCCACTTCATGATGAGGTCTGGCGTGATGACACCGGCGAGAGC
GTGGTATATGGTCGGCCGCTGGTGTTGCGTGCATTGGCGGCTATGGCGGA
ATCAAGTGTGTCGAATGTGGCAAGGACGAGAGCCGTCATTGTGAAGATTT
GGCAAGCGAGGGATAGCGATATGCTTAAGGGCTCGCCGGTGGATGCAGCG
GATGATGGCGTTGCGGGGTGTAATGATTGGGAGTGGTATGTTGCGCCGAT
TAGTACAGCGATGAGTTTGGCTTGAATGCCGCGCAAGAAGGCTGCAGACC
GCGTGGGTCCGGTCAAGACCCGAAGCCGCAGTGGCTGTAAAGAATGCCGC
GCCAGTCGAGTCCGCTGCGATCTGAAGAAACCGATCTGCACCAGGTGCCT
TGAGAAGGGCCTAGTATGCTCGACCCAACTCGTTCTCAAGTGGGAGTCCG
AGTTCGTTAGCCGCGGCTTGGCTTTTGGTAGAGCCGGCGTTTGGAGTAAG
GCTCGGGCTGCCGGCGGACTCCCTCCTCCTCCTGGAAAGTCTTCGGCTTC
GTTCCTCCTTCGCGATCAGGAATGGTGTCCTATTCCCCTTATCGAGTCGT
GGGGCTTCGTCAATAGTGGGGTTTCGACTTTTGAACAGCCTTATGAGGTT
AATGTTGCCTGTGATGAGTTGAATGCTCTTGTCGTCCGGGACAAGGGCAA
GAGCCCGGCGCTGGATGACTTGCTAGATGAGAATCCAGAGTGGTCTTTAT
CACCCTCATCGTTGTCGTCTCCATTCTCGATACGTGAGACTTCCGACTAC
TGCTCGCCTGTCCCACTTGTCTCTCCGCACCTGACCCCGCCTTTATCGAT
GTTCCCCAGTCTCTCAGACTCCAATCAGGGTCTCCTCTTTGATTACTATC
TCCAGCAAGTGTGTCCCCGGACCACCGCTAGCTCGAAGCTATCCTCTCCT
TTTGCTTCTATCATCCTCCCCTTCTGCATGTCCGCATCTCCAATCCTATT
CAAAGCCATTCAGGCTCTTGGAGCATGTCACTGGTCACGCTTCGACTCAA
CCTACAGTGTCATCGGCCTCCGCCTCAAATCAGAAGCCCTACGAGGCCTC
CGCCACCGTCTTTCAACCGAAGGCTCCCTCCTCTGCTCCGCAGACCCCGA
GGTCCTAGCGATCATGATGATGCTATGCCTCTACGAAATCGTCGACAACT
GCGACCAACGCTGGACGATCCACTTAAAAGGCGCCAAAGAATTGATCCGC
ATCCGCCGGCAGCAACAACAACTAACTTCCTCCCGACCCCGTCAATCTCT
TGACCCCGTCTCAGCCTTCGCCGAGCTCTTCTTCGCCTTTCAAGACGTCA
TGGGCCGCACCGCCTGCGGCGAAGAAGTCCTCTTCGGATCCGACTACTGG
CAAGAAAACAACCGCCACATCGACCTCTGGATGGGCTGCAGCCCCGAACT
TGTCTCCATCCTCTCCTCAATTACAGAAATGAGCCGCACCAGGCGCCAAC
TCACCTCCGATGCTGCCCGCAAAGCATTCTCTCACCGCGCCGCCTCCCTA
GGCCGCAGACTCGAGAACCTCTCTTCGCTCCGCCGCCGAATTGAAACGTC
TAGCAGCCGTGCTATACCTCCACTGCGCACTGTACGGTGCATCGCCATCT
ACACCACTGTCTCTGACCTGCTCGACTCCGGCTCCCTCGTCAGCATGACC
TGGCCTGTGTTCGTAGCGGCGGTCGAGCTGGATCCACTTCATGATGAGGT
CTGGCGTGATGACACCGGCGAGAGCGTGGTATATGGTCGGCCGCTGGTGT
TGCGTGCATTGGCGGCTATGGCGGAATCAAGTGTGTCGAATGTGGCAAGG
ACGAGAGCCGTCATTGTGAAGATTTGGCAAGCGAGGGATAGCGATATGCT
TAAGGGCTCGCCGGTGGATGCAGCGGATGATGGCGTTGCGGGGTGTAATG
ATTGGGAGTGGTATGTTGCGCCGATTAGTACAGCGATGAGTTTGGCTTGA
ATGCCGCGCAAGAAGGCTGCAGACCGCGTGGGTCCGGTCAAGACCCGAAG
CCGCAGTGGCTGTAAAGAATGCCGCGCCAGTCGAGTCCGCTGCGATCTGA
AGAAACCGATCTGCACCAGGTGCCTTGAGAAGGGCCTAGTATGCTCGACC
CAACTCGTTCTCAAGTGGGAGTCCGAGTTCGTTAGCCGCGGCTTGGCTTT
TGGTAGAGCCGGCGTTTGGAGTAAGGCTCGGGCTGCCGGCGGACTCCCTC
CTCCTCCTGGAAAGTCTTCGGCTTCGTTCCTCCTTCGCGATCAGGAATGG
TGTCCTATTCCCCTTATCGAGTCGTGGGGCTTCGTCAATAGTGGGGTTTC
GACTTTTGAACAGCCTTATGAGGTTAATGTTGCCTGTGATGAGTTGAATG
CTCTTGTCGTCCGGGACAAGGGCAAGAGCCCGGCGCTGGATGACTTGCTA
GATGAGAATCCAGAGTGGTCTTTATCACCCTCATCGTTGTCGTCTCCATT
CTCGATACGTGAGACTTCCGACTACTGCTCGCCTGTCCCACTTGTCTCTC
CGCACCTGACCCCGCCTTTATCGATGTTCCCCAGTCTCTCAGACTCCAAT
CAGGGTCTCCTCTTTGATTACTATCTCCAGCAAGTGTGTCCCCGGACCAC
CGCTAGCTCGAAGCTATCCTCTCCTTTTGCTTCTATCATCCTCCCCTTCT
GCATGTCCGCATCTCCAATCCTATTCAAAGCCATTCAGGCTCTTGGAGCA
TGTCACTGGTCACGCTTCGACTCAACCTACAGTGTCATCGGCCTCCGCCT
CAAATCAGAAGCCCTACGAGGCCTCCGCCACCGTCTTTCAACCGAAGGCT
CCCTCCTCTGCTCCGCAGACCCCGAGGTCCTAGCGATCATGATGATGCTA
TGCCTCTACGAAATCGTCGACAACTGCGACCAACGCTGGACGATCCACTT
AAAAGGCGCCAAAGAATTGATCCGCATCCGCCGGCAGCAACAACAACTAA
CTTCCTCCCGACCCCGTCAATCTCTTGACCCCGTCTCAGCCTTCGCCGAG
CTCTTCTTCGCCTTTCAAGACGTCATGGGCCGCACCGCCTGCGGCGAAGA
AGTCCTCTTCGGATCCGACTACTGGCAAGAAAACAACCGCCACATCGACC
TCTGGATGGGCTGCAGCCCCGAACTTGTCTCCATCCTCTCCTCAATTACA
GAAATGAGCCGCACCAGGCGCCAACTCACCTCCGATGCTGCCCGCAAAGC
ATTCTCTCACCGCGCCGCCTCCCTAGGCCGCAGACTCGAGAACCTCTCTT
CGCTCCGCCGCCGAATTGAAACGTCTAGCAGCCGTGCTATACCTCCACTG
CGCACTGTACGGTGCATCGCCATCTACACCACTGTCTCTGACCTGCTCGA
CTCCGGCTCCCTCGTCAGCATGACCTGGCCTGTGTTCGTAGCGGCGGTCG
AGCTGGATCCACTTCATGATGAGGTCTGGCGTGATGACACCGGCGAGAGC
GTGGTATATGGTCGGCCGCTGGTGTTGCGTGCATTGGCGGCTATGGCGGA
ATCAAGTGTGTCGAATGTGGCAAGGACGAGAGCCGTCATTGTGAAGATTT
GGCAAGCGAGGGATAGCGATATGCTTAAGGGCTCGCCGGTGGATGCAGCG
GATGATGGCGTTGCGGGGTGTAATGATTGGGAGTGGTATGTTGCGCCGAT
TAGTACAGCGATGAGTTTGGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_23895CAN33_23895Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23895-T1.exon1CAN33_23895-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_23895-T1.exon2CAN33_23895-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_23895-T1.exon3CAN33_23895-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23895-T1.cdsCAN33_23895-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23895-T1CAN33_23895-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1381562..1383364 +
Powered by Drupal