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CAN33_2400-T1, CAN33_2400-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2400-T1
Unique NameCAN33_2400-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1472085..1472645-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2400-T1 ID=CAN33_2400-T1|Name=CAN33_2400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=561bp|location=Sequence derived from alignment at NKJJ01000004.1:1472085..1472645- (Aspergillus niger FDAARGOS_311)
ATGGCAGATCACCTCCAAGCCTCCGTCTCATCCCTCGGATCCTCCCTCCA
ACTCCTCGATTCCTCTATCTCCACCCTCGACTCCGGCATTAGCGACTTTC
CCCGACTATGCAAGGTCTTGCAAACAACCCGAGTACGTACCCCTGCCTTC
AATATCAAACACTAAATCTAACCCCAATAGCATTTTGAACTTCTCCCCGA
ACCCACTCTGCGCGAAGCCCAACAATCCCTCCTAGATGAAATCACTCCCA
GCATCGCACATCTGCTCTCACTAGCATCGAATCATGTGGAGAAGCTCTCG
CGACGAGAACAAGGCCTGAGAGCTAAATGCGAGCTGCAAGAGGGAAGAAT
GTATTCGAATGAGAGCCGTCAGCCTTCGAGGATGCGTAGCGCTTTTGGCG
ATCGACTGCAGAGCGCGGGCGCTTCGGGGAAGGCTGCGAAGGCGGCGGAG
CTGAAGAGACTGATGCAGAAGAAGGAACGGTTGCAGTATGCGGTGGAGCG
GTTGGAGCTGCAGAGTACGCAGAGGGAGAGGCAGTTGAGGAAGAGTATGG
CGTTTCACTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1472085..1472645-

>CAN33_2400-T1 ID=CAN33_2400-T1|Name=CAN33_2400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1026bp|location=Sequence derived from alignment at NKJJ01000004.1:1472085..1472645- (Aspergillus niger FDAARGOS_311)
CATTTTGAACTTCTCCCCGAACCCACTCTGCGCGAAGCCCAACAATCCCT
CCTAGATGAAATCACTCCCAGCATCGCACATCTGCTCTCACTAGCATCGA
ATCATGTGGAGAAGCTCTCGCGACGAGAACAAGGCCTGAGAGCTAAATGC
GAGCTGCAAGAGGGAAGAATGTATTCGAATGAGAGCCGTCAGCCTTCGAG
GATGCGTAGCGCTTTTGGCGATCGACTGCAGAGCGCGGGCGCTTCGGGGA
AGGCTGCGAAGGCGGCGGAGCTGAAGAGACTGATGCAGAAGAAGGAACGG
TTGCAGTATGCGGTGGAGCGGTTGGAGCTGCAGAGTACGCAGAGGGAGAG
GCAGTTGAGGAAGAGTATGGCGTTTCACTAGATGGCAGATCACCTCCAAG
CCTCCGTCTCATCCCTCGGATCCTCCCTCCAACTCCTCGATTCCTCTATC
TCCACCCTCGACTCCGGCATTAGCGACTTTCCCCGACTATGCAAGGTCTT
GCAAACAACCCGACATTTTGAACTTCTCCCCGAACCCACTCTGCGCGAAG
CCCAACAATCCCTCCTAGATGAAATCACTCCCAGCATCGCACATCTGCTC
TCACTAGCATCGAATCATGTGGAGAAGCTCTCGCGACGAGAACAAGGCCT
GAGAGCTAAATGCGAGCTGCAAGAGGGAAGAATGTATTCGAATGAGAGCC
GTCAGCCTTCGAGGATGCGTAGCGCTTTTGGCGATCGACTGCAGAGCGCG
GGCGCTTCGGGGAAGGCTGCGAAGGCGGCGGAGCTGAAGAGACTGATGCA
GAAGAAGGAACGGTTGCAGTATGCGGTGGAGCGGTTGGAGCTGCAGAGTA
CGCAGAGGGAGAGGCAGTTGAGGAAGAGTATGGCGTTTCACTAGATGGCA
GATCACCTCCAAGCCTCCGTCTCATCCCTCGGATCCTCCCTCCAACTCCT
CGATTCCTCTATCTCCACCCTCGACTCCGGCATTAGCGACTTTCCCCGAC
TATGCAAGGTCTTGCAAACAACCCGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042729DASH complex
GO:0005876spindle microtubule
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2400CAN33_2400Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2400-T1CAN33_2400-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2400-T1.cdsCAN33_2400-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2400-T1.exon2CAN33_2400-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2400-T1.exon1CAN33_2400-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013251
DBxrefPFAM:PF08287
ProductSpc19 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1472085..1472645 -
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