|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1454152..1455813- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24025-T1 ID=CAN33_24025-T1|Name=CAN33_24025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1662bp|location=Sequence derived from alignment at NKJJ01000002.1:1454152..1455813- (Aspergillus niger FDAARGOS_311)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAGATGTTGA
TCATTGAAGCCGGACCCAACGTCGTCGATAATCCTCTCACCAGTACCCCA
TTGGCATGCTTTGGTGCTCATCACTCGCCTTTGGATTGGGACTATACCAC
GGTGCCACAAAAGCATCTCAACAATCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGACTCTAGCTG
GAGCTACGAGGGTCTACTTCCTTACTTCAAGCGCGTCGAGACGCATTACG
ATCCTAATGTCGACACGGCAATTCACGGCACCAGCGGCCCCATAACCAAC
ACAATTGTCGCACTCACCAGCCCGGACCGGAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTAGGTCTAGCTCACTTTGGGGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAGGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGCGGCAAAGGTAATTTTCCAGGAGC
AAGATGGTCAACAGGTCGCGGCAGGAGTCCAATTGGTCGATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTTCTCATGCTCTCGGGAATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGAAACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGAACAGTCCCGCATATGGCATGGGGG
TACCTTATGACTGGAACGTGACGCTGCAGACGCCTGCAGAGGAATTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCTAATGATCATCCATA
TCTTGACACGGGCTTTGCGCACTCTGAGGTTCTGGTTATCTACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATGCAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1454152..1455813- >CAN33_24025-T1 ID=CAN33_24025-T1|Name=CAN33_24025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1662bp|location=Sequence derived from alignment at NKJJ01000002.1:1454152..1455813- (Aspergillus niger FDAARGOS_311)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAGATGTTGA
TCATTGAAGCCGGACCCAACGTCGTCGATAATCCTCTCACCAGTACCCCA
TTGGCATGCTTTGGTGCTCATCACTCGCCTTTGGATTGGGACTATACCAC
GGTGCCACAAAAGCATCTCAACAATCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGACTCTAGCTG
GAGCTACGAGGGTCTACTTCCTTACTTCAAGCGCGTCGAGACGCATTACG
ATCCTAATGTCGACACGGCAATTCACGGCACCAGCGGCCCCATAACCAAC
ACAATTGTCGCACTCACCAGCCCGGACCGGAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTAGGTCTAGCTCACTTTGGGGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAGGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGCGGCAAAGGTAATTTTCCAGGAGC
AAGATGGTCAACAGGTCGCGGCAGGAGTCCAATTGGTCGATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTTCTCATGCTCTCGGGAATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGAAACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGAACAGTCCCGCATATGGCATGGGGG
TACCTTATGACTGGAACGTGACGCTGCAGACGCCTGCAGAGGAATTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCTAATGATCATCCATA
TCTTGACACGGGCTTTGCGCACTCTGAGGTTCTGGTTATCTACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATGCAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.10 |
| Note | EggNog:ENOG41 |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR012132 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | GMC oxidoreductase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1454152..1455813 - |
|
