You are here

Home

CAN33_2405-T1, CAN33_2405-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2405-T1
Unique NameCAN33_2405-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1472939..1473449+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2405-T1 ID=CAN33_2405-T1|Name=CAN33_2405-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=511bp|location=Sequence derived from alignment at NKJJ01000004.1:1472939..1473449+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCCTCGGAAAGAAGTTCCCCACCCCCGTTGGTATGTTTGCCGT
GGTCCTGGCGCGCCCATGTTGGGTCGAGAGATGAGAATATGAACTGACCT
GCTTTGCTCATTTAGCCAAGCCTCTGGGCCCCTTCTTCGCTGCCGGTATG
CATGCACACCTAGTACCTTGTTGAGTGGCTTTGTCTAGCGGGATAGCTAT
GCGGATATGGCGGAATAGCTCCATTGAAGCATGTTGAGAGAGGGGTAAAG
CGGCTTTCTAACGGTGTTTCGATCACAGGTCTGGTCATCCTCTACGGCGT
CAACTCTTTCGCCAACGTCATGATGTCGAGTAAGTGAACCTATCACGGCA
TTTTTCAATATCAGCACATTACCAAGCATCCGCTTGAATCCAACATCGAG
ACTCGCTCCGTCGTCAATTCAACTGCACACGCTAACCTCGGTTGTTACAA
TTTAGCCGCCGAGTTCAAGAACGACCCCCGCAACCCCAACCTCAAGAACC
AGAAGCATTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1472939..1473449+

>CAN33_2405-T1 ID=CAN33_2405-T1|Name=CAN33_2405-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=696bp|location=Sequence derived from alignment at NKJJ01000004.1:1472939..1473449+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCCTCGGAAAGAAGTTCCCCACCCCCGTTGCCAAGCCTCTGGG
CCCCTTCTTCGCTGCCGGTCTGGTCATCCTCTACGGCGTCAACTCTTTCG
CCAACGTCATGATGTCGACCGCCGAGTTCAAGAACGACCCCCGCAACCCC
AACCTCAAGAACCAGAAGCATTAAATGTCTCTCCTCGGAAAGAAGTTCCC
CACCCCCGTTGCCAAGCCTCTGGGCCCCTTCTTCGCTGCCGGTCTGGTCA
TCCTCTACGGCGTCAACTCTTTCGCCAACGTCATGATGTCGACCGCCGAG
TTCAAGAACGACCCCCGCAACCCCAACCTCAAGAACCAGAAGCATTAAAT
GTCTCTCCTCGGAAAGAAGTTCCCCACCCCCGTTGCCAAGCCTCTGGGCC
CCTTCTTCGCTGCCGGTCTGGTCATCCTCTACGGCGTCAACTCTTTCGCC
AACGTCATGATGTCGACCGCCGAGTTCAAGAACGACCCCCGCAACCCCAA
CCTCAAGAACCAGAAGCATTAAATGTCTCTCCTCGGAAAGAAGTTCCCCA
CCCCCGTTGCCAAGCCTCTGGGCCCCTTCTTCGCTGCCGGTCTGGTCATC
CTCTACGGCGTCAACTCTTTCGCCAACGTCATGATGTCGACCGCCGAGTT
CAAGAACGACCCCCGCAACCCCAACCTCAAGAACCAGAAGCATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0045263proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2405CAN33_2405Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2405-T1.exon1CAN33_2405-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2405-T1.exon2CAN33_2405-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2405-T1.exon3CAN33_2405-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2405-T1.exon4CAN33_2405-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2405-T1.cdsCAN33_2405-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2405-T1CAN33_2405-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006995
DBxrefPFAM:PF04911
ProductATP synthase j chain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1472939..1473449 +
Powered by Drupal