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CAN33_2410-T1, CAN33_2410-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2410-T1
Unique NameCAN33_2410-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1474328..1474796+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2410-T1 ID=CAN33_2410-T1|Name=CAN33_2410-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=469bp|location=Sequence derived from alignment at NKJJ01000004.1:1474328..1474796+ (Aspergillus niger FDAARGOS_311)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGGTAATTTCAACCTACCTGCTGAAGGTCGAGCCGAACAGCTACT
AATAGATTTATTCTGATATATAGCCAAGCTCTTCGCTACGTGATCCACAA
CACTTCCCTCCCCCAGCGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTT
CCATGCACGCCTACACTCGCTCGACGCAGATCAAGAACCGCTGTGTGGCG
GGTGGTGTTCCTCGCAGTGTTATCCGGGCGTTTAGACTTGGTAGAGTAAG
TTTATCCCTAGGGAGGGGTCTTTGGTTGGATAGACACTAATAGTTGGTTT
GTGCAGTACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCCCCGGTGT
GAAGAAGGCCAGTTGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1474328..1474796+

>CAN33_2410-T1 ID=CAN33_2410-T1|Name=CAN33_2410-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1026bp|location=Sequence derived from alignment at NKJJ01000004.1:1474328..1474796+ (Aspergillus niger FDAARGOS_311)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGCCAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAG
CGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACAC
TCGCTCGACGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCA
GTGTTATCCGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCG
CTGGCTGGTGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCA
GTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTG
TCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGC
CAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCG
CGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGA
CGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATC
CGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGG
TGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCAGTTCCGGT
CCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTGTCCGCGAC
CACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGCCAAGCTCT
TCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCGCGCCCAGG
CCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGACGCAGATC
AAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATCCGGGCGTT
TAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCC
CCGGTGTGAAGAAGGCCAGTTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2410CAN33_2410Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2410-T1.exon1CAN33_2410-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2410-T1.exon2CAN33_2410-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2410-T1.exon3CAN33_2410-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2410-T1.cdsCAN33_2410-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2410-T1CAN33_2410-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265D7J
DBxrefInterPro:IPR001209
DBxrefPFAM:PF00253
ProductRibosomal protein S14p/S29e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1474328..1474796 +
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