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CAN33_24180-T1, CAN33_24180-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24180-T1
Unique NameCAN33_24180-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1534201..1534979+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24180-T1 ID=CAN33_24180-T1|Name=CAN33_24180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=779bp|location=Sequence derived from alignment at NKJJ01000002.1:1534201..1534979+ (Aspergillus niger FDAARGOS_311)
ATGGAAGGCACGATTACTGCAGTTGACTCAACCGTGTCTGAAGATCCCGC
CCTCTGGACTATGATCATGAATGATCTGAGCAGTTACTATTCCATGGCCT
ATGCCACCAACTCGTCAACGAGCACCAGCAGCACCTCCAGCATCAAGAGT
ACATCAACCACGCATTCGACGACCTCGACGACCACATCCACGACTGCTTT
CACGTCGGAAACCGGCTATAACTGTAAAGGCTCTTCCCGCTGTGGTACCT
TTTCAAACCTACGGAGCTTCTGCGACAAAGCAAAGGATGACCTATTGGGC
ACGGTAACCTATGGGTAAGGAGATCCTTACGTGACGAATCATTAACCCCA
CTAACATCAGTCTAGCACCACGAAGAAAGACAAAAACTCCGGAACGTGCT
ACACGGATGGTATGAATGCCGGATTCGGATGCGGTGTGTTTGTCGAAGGG
GATAACTGTGAAATGACAGGGGCTGAGCTAGCAGCGTAAGTCGCTGCCCA
CTTGCAGCTAAGCTGTTATGCTGGACAGAAACTTACAATTAATCCAGGCA
CTATGACCATATCATGCAATCCTCTGGCGGTGGTTGCAAGATATGTGGTC
ACGCCCTGCTGTCGAACGGCTGTAAGGTGACAGTCAACTATGTGAGCCAT
TGCCAAAACACCGATGGGATCTTCCAGCCTGCTGGAGACGGTGGTCCGGA
TGAAGATGTAGAGACATTTGCTTCCCCCACTCCCTCTTCTACCCCCCTTC
CTGCTGCAAGCAACGGGCTGTTCAGCTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1534201..1534979+

>CAN33_24180-T1 ID=CAN33_24180-T1|Name=CAN33_24180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1998bp|location=Sequence derived from alignment at NKJJ01000002.1:1534201..1534979+ (Aspergillus niger FDAARGOS_311)
ATGGAAGGCACGATTACTGCAGTTGACTCAACCGTGTCTGAAGATCCCGC
CCTCTGGACTATGATCATGAATGATCTGAGCAGTTACTATTCCATGGCCT
ATGCCACCAACTCGTCAACGAGCACCAGCAGCACCTCCAGCATCAAGAGT
ACATCAACCACGCATTCGACGACCTCGACGACCACATCCACGACTGCTTT
CACGTCGGAAACCGGCTATAACTGTAAAGGCTCTTCCCGCTGTGGTACCT
TTTCAAACCTACGGAGCTTCTGCGACAAAGCAAAGGATGACCTATTGGGC
ACGGTAACCTATGGCACCACGAAGAAAGACAAAAACTCCGGAACGTGCTA
CACGGATGGTATGAATGCCGGATTCGGATGCGGTGTGTTTGTCGAAGGGG
ATAACTGTGAAATGACAGGGGCTGAGCTAGCAGCGCACTATGACCATATC
ATGCAATCCTCTGGCGGTGGTTGCAAGATATGTGGTCACGCCCTGCTGTC
GAACGGCTGTAAGGTGACAGTCAACTATGTGAGCCATTGCCAAAACACCG
ATGGGATCTTCCAGCCTGCTGGAGACGGTGGTCCGGATGAAGATGTAGAG
ACATTTGCTTCCCCCACTCCCTCTTCTACCCCCCTTCCTGCTGCAAGCAA
CGGGCTGTTCAGCTAGATGGAAGGCACGATTACTGCAGTTGACTCAACCG
TGTCTGAAGATCCCGCCCTCTGGACTATGATCATGAATGATCTGAGCAGT
TACTATTCCATGGCCTATGCCACCAACTCGTCAACGAGCACCAGCAGCAC
CTCCAGCATCAAGAGTACATCAACCACGCATTCGACGACCTCGACGACCA
CATCCACGACTGCTTTCACGTCGGAAACCGGCTATAACTGTAAAGGCTCT
TCCCGCTGTGGTACCTTTTCAAACCTACGGAGCTTCTGCGACAAAGCAAA
GGATGACCTATTGGGCACGGTAACCTATGGCACCACGAAGAAAGACAAAA
ACTCCGGAACGTGCTACACGGATGGTATGAATGCCGGATTCGGATGCGGT
GTGTTTGTCGAAGGGGATAACTGTGAAATGACAGGGGCTGAGCTAGCAGC
GCACTATGACCATATCATGCAATCCTCTGGCGGTGGTTGCAAGATATGTG
GTCACGCCCTGCTGTCGAACGGCTGTAAGGTGACAGTCAACTATGTGAGC
CATTGCCAAAACACCGATGGGATCTTCCAGCCTGCTGGAGACGGTGGTCC
GGATGAAGATGTAGAGACATTTGCTTCCCCCACTCCCTCTTCTACCCCCC
TTCCTGCTGCAAGCAACGGGCTGTTCAGCTAGATGGAAGGCACGATTACT
GCAGTTGACTCAACCGTGTCTGAAGATCCCGCCCTCTGGACTATGATCAT
GAATGATCTGAGCAGTTACTATTCCATGGCCTATGCCACCAACTCGTCAA
CGAGCACCAGCAGCACCTCCAGCATCAAGAGTACATCAACCACGCATTCG
ACGACCTCGACGACCACATCCACGACTGCTTTCACGTCGGAAACCGGCTA
TAACTGTAAAGGCTCTTCCCGCTGTGGTACCTTTTCAAACCTACGGAGCT
TCTGCGACAAAGCAAAGGATGACCTATTGGGCACGGTAACCTATGGCACC
ACGAAGAAAGACAAAAACTCCGGAACGTGCTACACGGATGGTATGAATGC
CGGATTCGGATGCGGTGTGTTTGTCGAAGGGGATAACTGTGAAATGACAG
GGGCTGAGCTAGCAGCGCACTATGACCATATCATGCAATCCTCTGGCGGT
GGTTGCAAGATATGTGGTCACGCCCTGCTGTCGAACGGCTGTAAGGTGAC
AGTCAACTATGTGAGCCATTGCCAAAACACCGATGGGATCTTCCAGCCTG
CTGGAGACGGTGGTCCGGATGAAGATGTAGAGACATTTGCTTCCCCCACT
CCCTCTTCTACCCCCCTTCCTGCTGCAAGCAACGGGCTGTTCAGCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24180CAN33_24180Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24180-T1.exon1CAN33_24180-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_24180-T1.exon2CAN33_24180-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24180-T1.exon3CAN33_24180-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24180-T1.cdsCAN33_24180-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24180-T1CAN33_24180-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029167
DBxrefPFAM:PF15474
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1534201..1534979 +
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