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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1476809..1477845- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2420-T1 ID=CAN33_2420-T1|Name=CAN33_2420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1037bp|location=Sequence derived from alignment at NKJJ01000004.1:1476809..1477845- (Aspergillus niger FDAARGOS_311)
ATGGTTCTCCTAACAACAACACCTCCCATTCTCACCGCCATCGAGGCCCT
CCCTCCTACCTCGCGACATGACTTCTCCCTCCCCGATACCTTGAAACTGG
AGGACCCAATCTCCCACGACCAATTGATCAGAATAGCTCGATACTTCCGA
CAAACAGATACTTCCAGCTCCACCTATTCGATTGCTGAAACCAAAACCCT
GAACTCCCTCCTCCGCGGAACAAAAGTCTACATTCCCCCGCCGCCCAAGA
AACCCGAGCCGGTAAACACCTATCTCCAACACCTCCCCAACACTATACCA
ATAAGCATACACAAAACTAACAAACGACAATAAATATAGAGCCCCGAATA
CCTCGCCCTCAAAGCGCGCCTCCTCGCCGCGGCCGAAACAGACGCCTACA
ACCGCATGACTTCATCCTCGACTTTCTCCTCATCCGCTTTCTTCCCTCCA
TCATCCAGAACCCCAGCACCAACCAAACCCTCAATCTTCACCTCTTCAAC
TCCCACCGTCGAAGCCCTGCACAACAAGTCTAATAATAACAATGAAGAAA
CAGATCCCCTCACACCCGGCCTCGTCCTAAACATCTTCCTCTCCGTCCTC
ATCACTGGGTTCAGCGTGTACTGGGCTCTGCGGAGTTTCCGGTCCCCCGA
GATGCTAGTCTCCACTGTAGCAAGGATTTGGAGGGGAACGGGCACAGGGC
AAGGAGTATCGGAGTCGGTGAAGGTTTTGGTGTCGTTGGGGGCGGCGGTC
GTGGTGGGGGTGGCGGAGGTGATGATATATGCGATTTATTTGAGAAAGGT
GGAGGTTGCAAAGGGGAGGGAGAGGAGGGTGAAGGAGAGGAAGGTGGTTG
TGGAAAGTGAGAGGGTTGGGGGAAGGTTAAGCAGGGTGATGAGGATGGGG
CGGAGAGGGTTGGGGGCAAGGAGGAGGAGGTTATCTGGGGAAGGGGAGTG
AATGGGGGGTTGAGGAGGAGGGTGAGGGAGAAATGGGAGGAGAAGGAGAA
GAATGTGGATATGCAGAGGGATGGGAGTAGCGAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1476809..1477845- >CAN33_2420-T1 ID=CAN33_2420-T1|Name=CAN33_2420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2223bp|location=Sequence derived from alignment at NKJJ01000004.1:1476809..1477845- (Aspergillus niger FDAARGOS_311)
GGTGATGAGGATGGGGCGGAGAGGGTTGGGGGCAAGGAGGAGGAGGTTAT
CTGGGGAAGGGGAGTGAATGGGGGGTTGAGGAGGAGGGTGAGGGAGAAAT
GGGAGGAGAAGGAGAAGAATGTGGATATGCAGAGGGATGGGAGTAGCGAA
TAGAGCCCCGAATACCTCGCCCTCAAAGCGCGCCTCCTCGCCGCGGCCGA
AACAGACGCCTACAACCGCATGACTTCATCCTCGACTTTCTCCTCATCCG
CTTTCTTCCCTCCATCATCCAGAACCCCAGCACCAACCAAACCCTCAATC
TTCACCTCTTCAACTCCCACCGTCGAAGCCCTGCACAACAAGTCTAATAA
TAACAATGAAGAAACAGATCCCCTCACACCCGGCCTCGTCCTAAACATCT
TCCTCTCCGTCCTCATCACTGGGTTCAGCGTGTACTGGGCTCTGCGGAGT
TTCCGGTCCCCCGAGATGCTAGTCTCCACTATGGTTCTCCTAACAACAAC
ACCTCCCATTCTCACCGCCATCGAGGCCCTCCCTCCTACCTCGCGACATG
ACTTCTCCCTCCCCGATACCTTGAAACTGGAGGACCCAATCTCCCACGAC
CAATTGATCAGAATAGCTCGATACTTCCGACAAACAGATACTTCCAGCTC
CACCTATTCGATTGCTGAAACCAAAACCCTGAACTCCCTCCTCCGCGGAA
CAAAAGTCTACATTCCCCCGCCGCCCAAGAAACCCGAGCCGGGTGATGAG
GATGGGGCGGAGAGGGTTGGGGGCAAGGAGGAGGAGGTTATCTGGGGAAG
GGGAGTGAATGGGGGGTTGAGGAGGAGGGTGAGGGAGAAATGGGAGGAGA
AGGAGAAGAATGTGGATATGCAGAGGGATGGGAGTAGCGAATAGAGCCCC
GAATACCTCGCCCTCAAAGCGCGCCTCCTCGCCGCGGCCGAAACAGACGC
CTACAACCGCATGACTTCATCCTCGACTTTCTCCTCATCCGCTTTCTTCC
CTCCATCATCCAGAACCCCAGCACCAACCAAACCCTCAATCTTCACCTCT
TCAACTCCCACCGTCGAAGCCCTGCACAACAAGTCTAATAATAACAATGA
AGAAACAGATCCCCTCACACCCGGCCTCGTCCTAAACATCTTCCTCTCCG
TCCTCATCACTGGGTTCAGCGTGTACTGGGCTCTGCGGAGTTTCCGGTCC
CCCGAGATGCTAGTCTCCACTATGGTTCTCCTAACAACAACACCTCCCAT
TCTCACCGCCATCGAGGCCCTCCCTCCTACCTCGCGACATGACTTCTCCC
TCCCCGATACCTTGAAACTGGAGGACCCAATCTCCCACGACCAATTGATC
AGAATAGCTCGATACTTCCGACAAACAGATACTTCCAGCTCCACCTATTC
GATTGCTGAAACCAAAACCCTGAACTCCCTCCTCCGCGGAACAAAAGTCT
ACATTCCCCCGCCGCCCAAGAAACCCGAGCCGGGTGATGAGGATGGGGCG
GAGAGGGTTGGGGGCAAGGAGGAGGAGGTTATCTGGGGAAGGGGAGTGAA
TGGGGGGTTGAGGAGGAGGGTGAGGGAGAAATGGGAGGAGAAGGAGAAGA
ATGTGGATATGCAGAGGGATGGGAGTAGCGAATAGAGCCCCGAATACCTC
GCCCTCAAAGCGCGCCTCCTCGCCGCGGCCGAAACAGACGCCTACAACCG
CATGACTTCATCCTCGACTTTCTCCTCATCCGCTTTCTTCCCTCCATCAT
CCAGAACCCCAGCACCAACCAAACCCTCAATCTTCACCTCTTCAACTCCC
ACCGTCGAAGCCCTGCACAACAAGTCTAATAATAACAATGAAGAAACAGA
TCCCCTCACACCCGGCCTCGTCCTAAACATCTTCCTCTCCGTCCTCATCA
CTGGGTTCAGCGTGTACTGGGCTCTGCGGAGTTTCCGGTCCCCCGAGATG
CTAGTCTCCACTATGGTTCTCCTAACAACAACACCTCCCATTCTCACCGC
CATCGAGGCCCTCCCTCCTACCTCGCGACATGACTTCTCCCTCCCCGATA
CCTTGAAACTGGAGGACCCAATCTCCCACGACCAATTGATCAGAATAGCT
CGATACTTCCGACAAACAGATACTTCCAGCTCCACCTATTCGATTGCTGA
AACCAAAACCCTGAACTCCCTCCTCCGCGGAACAAAAGTCTACATTCCCC
CGCCGCCCAAGAAACCCGAGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021013 |
| DBxref | PFAM:PF11712 |
| Product | Endoplasmic reticulum-based factor for assembly of V-ATPase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1476809..1477845 - |
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