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CAN33_2425-T1, CAN33_2425-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2425-T1
Unique NameCAN33_2425-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1478105..1478948+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2425-T1 ID=CAN33_2425-T1|Name=CAN33_2425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=844bp|location=Sequence derived from alignment at NKJJ01000004.1:1478105..1478948+ (Aspergillus niger FDAARGOS_311)
ATGGCAGACAAGAAGACTTCCTCGTAAGTACTCCATGTCCAGTACCCTCG
AAAAACACACTTCTCCGTACACCTTCGCTATAGCCCACCCCTCCCCTCTC
AACCCAAATATCCCCAAATCACAACCCCCCTCCAACTACAACACCCACAA
ACCCCCCTCAACAACCACAACCCAGACCACGACTAACTCTTTCCCCCCGG
GAAATCCAGAGTAACACCCCCCACCAACCCGCGCGGCATTCCCGCCGCCC
CCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGCGCAGCGAAGTCGAG
CCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAGTACCAATTCATGGA
AGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGACAAGATCCCCGACA
TCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAACTCAGAAGAGAAAGC
GCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTGAACGATACGTTGTA
CGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGAAGTGTATCTCTGGC
TTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGGAGGCTGAGAGCATG
TTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTCGGGAACTGTGAGGA
GGATTTGGAATTTTTGAGGGAGCAAATTACGGTATGTCCTTCTCTCTGGT
TTCTTTTTCTTTGGTTTCTGGGGCTAATGGTATTTGTAGACGCTTGAGGT
TGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGAAAGAAA
AGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1478105..1478948+

>CAN33_2425-T1 ID=CAN33_2425-T1|Name=CAN33_2425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1800bp|location=Sequence derived from alignment at NKJJ01000004.1:1478105..1478948+ (Aspergillus niger FDAARGOS_311)
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRF1CAN33_2425Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2425-T1.exon1CAN33_2425-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2425-T1.exon2CAN33_2425-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2425-T1.exon3CAN33_2425-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2425-T1.cdsCAN33_2425-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2425-T1CAN33_2425-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264UVA
DBxrefInterPro:IPR016655
DBxrefInterPro:IPR009053
DBxrefInterPro:IPR004127
DBxrefPFAM:PF02996
Productpeptide chain release factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1478105..1478948 +
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