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CAN33_24420-T1, CAN33_24420-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24420-T1
Unique NameCAN33_24420-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1684872..1686169+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24420-T1 ID=CAN33_24420-T1|Name=CAN33_24420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1298bp|location=Sequence derived from alignment at NKJJ01000002.1:1684872..1686169+ (Aspergillus niger FDAARGOS_311)
ATGGGTAAATCCTCCAAAGACAAGCGGGATGCCTACTACCGCCTAGCCAA
AGAGCAAAACTGGCGCGCCCGGTCCGCCTTCAAACTCATCCAAATCGACG
AGCAATTCGATCTATTCGAGCACGAGAACCCAGACAAAGTCACCCGAGTC
GTCGATCTGTGCGCCGCCCCCGGCAGCTGGAGTCAAGTGCTGAGTCGCGT
TCTGATCAAGGGTGAGAGTTTCGGTCGCCGCGCCTGGGTCGAGAAGAAGC
GCAAAGAAAAGGAAGCCCTCGATCGGGTCCGCAATGGCGACAACACCACC
ACAGTCACTTCATCAGAAGACACCGACATGGCCGAACTGAAACCCCGCAA
GAACGTCAAAATCGTCTCCATCGACCTCCAACCCATGGCGCCCCTCGAAG
GCATCACCACCCTCAAAGCAGACATCACCCATCCCTCCACCATCCCGCTC
CTCCTGCGCGCCCTGGACCCTGAAGCCTACGACTCCTCCACCTCTTCCAC
TCCCTCCGCCATTCGTCCCCCTCACCCCGTCGACCTGGTCATTTCCGACG
GCGCCCCGGACGTAACAGGCTTGCACGACCTCGACATCTACATCCAATCG
CAATTGCTCTACTCGGCGCTCAACCTCGCCCTGGGCGTCCTCCGCCCCGG
CGGCAAATTCGTCGCCAAGATCTTCCGCGGCCGCGACGTCGATCTCCTCT
ACGCGCAACTCCGCACCGTGTTCGAGAAAGTTAGCGTCGCAAAGCCGAGG
AGTAGTCGTGCTAGTAGTCTGGAGGCGTTTGTCGTGTGCGAAGGGTTCAT
CCCGCCTTCGATCCATGCTGGTACGGACGCTCTGAAGAACCCTATCTTCG
GGGTGTGGCTGTCCCGCCGGCTGTTTCAGCGGATGGTAATGTCGGGGTGG
AGGTTGTCGAGTCTGAGGACGACGAGGCACGCCCTGTTAAGCTGGCTCGG
TTTGCTCCGGCCGAGGCGACTCTGGGTGCTGCTTCAGCGGAGTCGAGCCA
GACGGAGGCGCGGCTGCTTCACGATGACTCCTTGGCGTCGGTGACGCCTA
CGCCATTGGCGTATAAGTCTGCCGGTGAGAAGTTTGCTGTTGAAAATAGG
TGGATTCCTAGGTTCATTGCTTGTGGTGATCTCTCGGCTTGGGATTCCGA
TGCCTCTTATACGCTCCCGCCGGATCATGTCAGTTTGGATCCGGTGCAGC
CGCCTACTGCGCCGCCTTATCGGCGGGCGTTGGAGTTGAGGAAGGAGAAG
GGTGGTGCGTATGGGAAGACGAAGTTGGGTAGTTTGGGACGGGCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1684872..1686169+

>CAN33_24420-T1 ID=CAN33_24420-T1|Name=CAN33_24420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2478bp|location=Sequence derived from alignment at NKJJ01000002.1:1684872..1686169+ (Aspergillus niger FDAARGOS_311)
ATGGGTAAATCCTCCAAAGACAAGCGGGATGCCTACTACCGCCTAGCCAA
AGAGCAAAACTGGCGCGCCCGGTCCGCCTTCAAACTCATCCAAATCGACG
AGCAATTCGATCTATTCGAGCACGAGAACCCAGACAAAGTCACCCGAGTC
GTCGATCTGTGCGCCGCCCCCGGCAGCTGGAGTCAAGTGCTGAGTCGCGT
TCTGATCAAGGGTGAGAGTTTCGGTCGCCGCGCCTGGGTCGAGAAGAAGC
GCAAAGAAAAGGAAGCCCTCGATCGGGTCCGCAATGGCGACAACACCACC
ACAGTCACTTCATCAGAAGACACCGACATGGCCGAACTGAAACCCCGCAA
GAACGTCAAAATCGTCTCCATCGACCTCCAACCCATGGCGCCCCTCGAAG
GCATCACCACCCTCAAAGCAGACATCACCCATCCCTCCACCATCCCGCTC
CTCCTGCGCGCCCTGGACCCTGAAGCCTACGACTCCTCCACCTCTTCCAC
TCCCTCCGCCATTCGTCCCCCTCACCCCGTCGACCTGGTCATTTCCGACG
GCGCCCCGGACGTAACAGGCTTGCACGACCTCGACATCTACATCCAATCG
CAATTGCTCTACTCGGCGCTCAACCTCGCCCTGGGCGTCCTCCGCCCCGG
CGGCAAATTCGTCGCCAAGATCTTCCGCGGCCGCGACGTCGATCTCCTCT
ACGCGCAACTCCGCACCGTGTTCGAGAAAGTTAGCGTCGCAAAGCCGAGG
AGTAGTCGTGCTAGTAGTCTGGAGGCGTTTGTCGTGTGCGAAGGGTTCAT
CCCGCCTTCGATCCATGCTGCGGATGGTAATGTCGGGGTGGAGGTTGTCG
AGTCTGAGGACGACGAGGCACGCCCTGTTAAGCTGGCTCGGTTTGCTCCG
GCCGAGGCGACTCTGGGTGCTGCTTCAGCGGAGTCGAGCCAGACGGAGGC
GCGGCTGCTTCACGATGACTCCTTGGCGTCGGTGACGCCTACGCCATTGG
CGTATAAGTCTGCCGGTGAGAAGTTTGCTGTTGAAAATAGGTGGATTCCT
AGGTTCATTGCTTGTGGTGATCTCTCGGCTTGGGATTCCGATGCCTCTTA
TACGCTCCCGCCGGATCATGTCAGTTTGGATCCGGTGCAGCCGCCTACTG
CGCCGCCTTATCGGCGGGCGTTGGAGTTGAGGAAGGAGAAGGGTGGTGCG
TATGGGAAGACGAAGTTGGGTAGTTTGGGACGGGCGTGAATGGGTAAATC
CTCCAAAGACAAGCGGGATGCCTACTACCGCCTAGCCAAAGAGCAAAACT
GGCGCGCCCGGTCCGCCTTCAAACTCATCCAAATCGACGAGCAATTCGAT
CTATTCGAGCACGAGAACCCAGACAAAGTCACCCGAGTCGTCGATCTGTG
CGCCGCCCCCGGCAGCTGGAGTCAAGTGCTGAGTCGCGTTCTGATCAAGG
GTGAGAGTTTCGGTCGCCGCGCCTGGGTCGAGAAGAAGCGCAAAGAAAAG
GAAGCCCTCGATCGGGTCCGCAATGGCGACAACACCACCACAGTCACTTC
ATCAGAAGACACCGACATGGCCGAACTGAAACCCCGCAAGAACGTCAAAA
TCGTCTCCATCGACCTCCAACCCATGGCGCCCCTCGAAGGCATCACCACC
CTCAAAGCAGACATCACCCATCCCTCCACCATCCCGCTCCTCCTGCGCGC
CCTGGACCCTGAAGCCTACGACTCCTCCACCTCTTCCACTCCCTCCGCCA
TTCGTCCCCCTCACCCCGTCGACCTGGTCATTTCCGACGGCGCCCCGGAC
GTAACAGGCTTGCACGACCTCGACATCTACATCCAATCGCAATTGCTCTA
CTCGGCGCTCAACCTCGCCCTGGGCGTCCTCCGCCCCGGCGGCAAATTCG
TCGCCAAGATCTTCCGCGGCCGCGACGTCGATCTCCTCTACGCGCAACTC
CGCACCGTGTTCGAGAAAGTTAGCGTCGCAAAGCCGAGGAGTAGTCGTGC
TAGTAGTCTGGAGGCGTTTGTCGTGTGCGAAGGGTTCATCCCGCCTTCGA
TCCATGCTGCGGATGGTAATGTCGGGGTGGAGGTTGTCGAGTCTGAGGAC
GACGAGGCACGCCCTGTTAAGCTGGCTCGGTTTGCTCCGGCCGAGGCGAC
TCTGGGTGCTGCTTCAGCGGAGTCGAGCCAGACGGAGGCGCGGCTGCTTC
ACGATGACTCCTTGGCGTCGGTGACGCCTACGCCATTGGCGTATAAGTCT
GCCGGTGAGAAGTTTGCTGTTGAAAATAGGTGGATTCCTAGGTTCATTGC
TTGTGGTGATCTCTCGGCTTGGGATTCCGATGCCTCTTATACGCTCCCGC
CGGATCATGTCAGTTTGGATCCGGTGCAGCCGCCTACTGCGCCGCCTTAT
CGGCGGGCGTTGGAGTTGAGGAAGGAGAAGGGTGGTGCGTATGGGAAGAC
GAAGTTGGGTAGTTTGGGACGGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0001510RNA methylation
GO:0008033tRNA processing
GO:0032259methylation
Vocabulary: Molecular Function
TermDefinition
GO:0008175tRNA methyltransferase activity
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24420CAN33_24420Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24420-T1.exon1CAN33_24420-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_24420-T1.exon2CAN33_24420-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24420-T1.cdsCAN33_24420-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24420-T1CAN33_24420-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR015507
DBxrefInterPro:IPR028590
DBxrefInterPro:IPR002877
DBxrefPFAM:PF01728
ProductFtsJ-like methyltransferase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1684872..1686169 +
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