You are here

Home

CAN33_24495-T1, CAN33_24495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24495-T1
Unique NameCAN33_24495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1718573..1719962+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24495-T1 ID=CAN33_24495-T1|Name=CAN33_24495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1390bp|location=Sequence derived from alignment at NKJJ01000002.1:1718573..1719962+ (Aspergillus niger FDAARGOS_311)
ATGTTTCACTCATCGGTAAGTCTATTTGGCAACTTCCCGCGGCCTAAACC
AATTGGCATTGAAAGCAGTGTCAATTACACAACACACCACCATCTGCAAA
TTCACGAGAGAAAATGTGGCTCTGCCATCCATTGATTCATGGACTAAAAG
ATGTACTCTCCATAGAAGCCGTATTCGGCTGTGACGGTCCAGATCGAGGT
CCTCACCAGCGAACAGTATGAGGTGGAAGATTCAAGTGGAATCGTGGACC
TTATCGAGGCCATTCGTATCCAGGCCAGTGGTCCTACAGAAGCGAGTCGC
GCTTTGCGTAAGAAGCTGTTCGTGTGTCTAATCCCTCTGATTGAGAGCGC
TCTAACGCCCTCTCAGCAAGTATGGCAATCTTCACCGCCAATTGCGAGCC
CTTACGATCCTCGATTTCCTGATCCAGAATACCGGCGACCGCTTTCTGCG
GGAATTTGCAGATGAGCCCTTGCTGGAACGACTACGAATCGCCGCGACCG
ACCCGGTTTCTGACCCTTTGGTAAAAGAGAAATGCAAACAGCTCTTTGGG
CAATGGGCAGCCTCTTACAAGAACACCCCTGGGATGGAGCGGGTTACAGG
TCTCTACAGACAACTACCGAAGCGTAAGCAGCCGGCTACTCAGGCAAAGG
CCAAAGTGTTGCGGGATGCGGGGCAATCCGAAGAACCTTCGATGGGCCAT
ACGGTGTCCGTATCAGCCGGAAATGGGCCGGCTACAGTTCTCAGTGGCCC
CAAGCACAAGCACACCTCCAGCAAATCATCTCTCTCGTCTTTCAGGAAGG
AGAAGAAGGAGAAGAAGACATTAAGCAGGTCTTTCAGCCTCGATAAAGAG
AAGCCAGAGATGCTACAGACCCTCGCGTCAGCTTCCGTCGCCAGTACAAA
CCTCCTCAACGCTCTCAAGCTAGTTAACCGCGAAACGCAACGGGTCAGCG
AAGATGCCGAAGTCCTCAACCGGTTTGAGACTTGCAAGACATTACGACGC
CAAATTCTGCGATACATCCAGCACGTGGAGAGTGAGGAGTTTCTGGGTAG
TTTGATTCATGCAAACGAAGAGCTAGTCACGGCACTTATGGCATTTGAAG
TCCTGGACAAGAGTGTAGACTACGACAGTGATAGCGACCAGGATGTCCTA
GAGACGGGGTGGACCCCTGACCGCGACGACCTCCCCGACTCATTCGCAGG
GTTGGTTGTGAACCCCCCGAAGCCACCACGTCCCCCTCGTCCCTTGAGCA
TATCCGTACCATCCTCATCAAGGAAAGTCTACAGTGACAGCGAGTCAGAA
ACGGAAGACGATGACGATGAAGATAATCCATTTGGCGACCGCAACGCCAT
CCACACCCCTGGCATTGAGAAGCACGAGCCTACCTGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:1718573..1719962+

>CAN33_24495-T1 ID=CAN33_24495-T1|Name=CAN33_24495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4284bp|location=Sequence derived from alignment at NKJJ01000002.1:1718573..1719962+ (Aspergillus niger FDAARGOS_311)
ATGTTTCACTCATCGAAGCCGTATTCGGCTGTGACGGTCCAGATCGAGGT
CCTCACCAGCGAACAGTATGAGGTGGAAGATTCAAGTGGAATCGTGGACC
TTATCGAGGCCATTCGTATCCAGGCCAGTGGTCCTACAGAAGCGAGTCGC
GCTTTGCGTAAGAAGCTCAAGTATGGCAATCTTCACCGCCAATTGCGAGC
CCTTACGATCCTCGATTTCCTGATCCAGAATACCGGCGACCGCTTTCTGC
GGGAATTTGCAGATGAGCCCTTGCTGGAACGACTACGAATCGCCGCGACC
GACCCGGTTTCTGACCCTTTGGTAAAAGAGAAATGCAAACAGCTCTTTGG
GCAATGGGCAGCCTCTTACAAGAACACCCCTGGGATGGAGCGGGTTACAG
GTCTCTACAGACAACTACCGAAGCGTAAGCAGCCGGCTACTCAGGCAAAG
GCCAAAGTGTTGCGGGATGCGGGGCAATCCGAAGAACCTTCGATGGGCCA
TACGGTCAGGTCTTTCAGCCTCGATAAAGAGAAGCCAGAGATGCTACAGA
CCCTCGCGTCAGCTTCCGTCGCCAGTACAAACCTCCTCAACGCTCTCAAG
CTAGTTAACCGCGAAACGCAACGGGTCAGCGAAGATGCCGAAGTCCTCAA
CCGGTTTGAGACTTGCAAGACATTACGACGCCAAATTCTGCGATACATCC
AGCACGTGGAGAGTGAGGAGTTTCTGGGTAGTTTGATTCATGCAAACGAA
GAGCTAGTCACGGCACTTATGGCATTTGAAGTCCTGGACAAGAGTGTAGA
CTACGACAGTGATAGCGACCAGGATGTCCTAGAGACGGGGTGGACCCCTG
ACCGCGACGACCTCCCCGACTCATTCGCAGGGTTGGTTGTGAACCCCCCG
AAGCCACCACGTCCCCCTCGTCCCTTGAGCATATCCGTACCATCCTCATC
AAGGAAAGTCTACAGTGACAGCGAGTCAGAAACGGAAGACGATGACGATG
AAGATAATCCATTTGGCGACCGCAACGCCATCCACACCCCTGGCATTGAG
AAGCACGAGCCTACCTGGTAGATGTTTCACTCATCGAAGCCGTATTCGGC
TGTGACGGTCCAGATCGAGGTCCTCACCAGCGAACAGTATGAGGTGGAAG
ATTCAAGTGGAATCGTGGACCTTATCGAGGCCATTCGTATCCAGGCCAGT
GGTCCTACAGAAGCGAGTCGCGCTTTGCGTAAGAAGCTCAAGTATGGCAA
TCTTCACCGCCAATTGCGAGCCCTTACGATCCTCGATTTCCTGATCCAGA
ATACCGGCGACCGCTTTCTGCGGGAATTTGCAGATGAGCCCTTGCTGGAA
CGACTACGAATCGCCGCGACCGACCCGGTTTCTGACCCTTTGGTAAAAGA
GAAATGCAAACAGCTCTTTGGGCAATGGGCAGCCTCTTACAAGAACACCC
CTGGGATGGAGCGGGTTACAGGTCTCTACAGACAACTACCGAAGCGTAAG
CAGCCGGCTACTCAGGCAAAGGCCAAAGTGTTGCGGGATGCGGGGCAATC
CGAAGAACCTTCGATGGGCCATACGGTCAGGTCTTTCAGCCTCGATAAAG
AGAAGCCAGAGATGCTACAGACCCTCGCGTCAGCTTCCGTCGCCAGTACA
AACCTCCTCAACGCTCTCAAGCTAGTTAACCGCGAAACGCAACGGGTCAG
CGAAGATGCCGAAGTCCTCAACCGGTTTGAGACTTGCAAGACATTACGAC
GCCAAATTCTGCGATACATCCAGCACGTGGAGAGTGAGGAGTTTCTGGGT
AGTTTGATTCATGCAAACGAAGAGCTAGTCACGGCACTTATGGCATTTGA
AGTCCTGGACAAGAGTGTAGACTACGACAGTGATAGCGACCAGGATGTCC
TAGAGACGGGGTGGACCCCTGACCGCGACGACCTCCCCGACTCATTCGCA
GGGTTGGTTGTGAACCCCCCGAAGCCACCACGTCCCCCTCGTCCCTTGAG
CATATCCGTACCATCCTCATCAAGGAAAGTCTACAGTGACAGCGAGTCAG
AAACGGAAGACGATGACGATGAAGATAATCCATTTGGCGACCGCAACGCC
ATCCACACCCCTGGCATTGAGAAGCACGAGCCTACCTGGTAGATGTTTCA
CTCATCGAAGCCGTATTCGGCTGTGACGGTCCAGATCGAGGTCCTCACCA
GCGAACAGTATGAGGTGGAAGATTCAAGTGGAATCGTGGACCTTATCGAG
GCCATTCGTATCCAGGCCAGTGGTCCTACAGAAGCGAGTCGCGCTTTGCG
TAAGAAGCTCAAGTATGGCAATCTTCACCGCCAATTGCGAGCCCTTACGA
TCCTCGATTTCCTGATCCAGAATACCGGCGACCGCTTTCTGCGGGAATTT
GCAGATGAGCCCTTGCTGGAACGACTACGAATCGCCGCGACCGACCCGGT
TTCTGACCCTTTGGTAAAAGAGAAATGCAAACAGCTCTTTGGGCAATGGG
CAGCCTCTTACAAGAACACCCCTGGGATGGAGCGGGTTACAGGTCTCTAC
AGACAACTACCGAAGCGTAAGCAGCCGGCTACTCAGGCAAAGGCCAAAGT
GTTGCGGGATGCGGGGCAATCCGAAGAACCTTCGATGGGCCATACGGTCA
GGTCTTTCAGCCTCGATAAAGAGAAGCCAGAGATGCTACAGACCCTCGCG
TCAGCTTCCGTCGCCAGTACAAACCTCCTCAACGCTCTCAAGCTAGTTAA
CCGCGAAACGCAACGGGTCAGCGAAGATGCCGAAGTCCTCAACCGGTTTG
AGACTTGCAAGACATTACGACGCCAAATTCTGCGATACATCCAGCACGTG
GAGAGTGAGGAGTTTCTGGGTAGTTTGATTCATGCAAACGAAGAGCTAGT
CACGGCACTTATGGCATTTGAAGTCCTGGACAAGAGTGTAGACTACGACA
GTGATAGCGACCAGGATGTCCTAGAGACGGGGTGGACCCCTGACCGCGAC
GACCTCCCCGACTCATTCGCAGGGTTGGTTGTGAACCCCCCGAAGCCACC
ACGTCCCCCTCGTCCCTTGAGCATATCCGTACCATCCTCATCAAGGAAAG
TCTACAGTGACAGCGAGTCAGAAACGGAAGACGATGACGATGAAGATAAT
CCATTTGGCGACCGCAACGCCATCCACACCCCTGGCATTGAGAAGCACGA
GCCTACCTGGTAGATGTTTCACTCATCGAAGCCGTATTCGGCTGTGACGG
TCCAGATCGAGGTCCTCACCAGCGAACAGTATGAGGTGGAAGATTCAAGT
GGAATCGTGGACCTTATCGAGGCCATTCGTATCCAGGCCAGTGGTCCTAC
AGAAGCGAGTCGCGCTTTGCGTAAGAAGCTCAAGTATGGCAATCTTCACC
GCCAATTGCGAGCCCTTACGATCCTCGATTTCCTGATCCAGAATACCGGC
GACCGCTTTCTGCGGGAATTTGCAGATGAGCCCTTGCTGGAACGACTACG
AATCGCCGCGACCGACCCGGTTTCTGACCCTTTGGTAAAAGAGAAATGCA
AACAGCTCTTTGGGCAATGGGCAGCCTCTTACAAGAACACCCCTGGGATG
GAGCGGGTTACAGGTCTCTACAGACAACTACCGAAGCGTAAGCAGCCGGC
TACTCAGGCAAAGGCCAAAGTGTTGCGGGATGCGGGGCAATCCGAAGAAC
CTTCGATGGGCCATACGGTCAGGTCTTTCAGCCTCGATAAAGAGAAGCCA
GAGATGCTACAGACCCTCGCGTCAGCTTCCGTCGCCAGTACAAACCTCCT
CAACGCTCTCAAGCTAGTTAACCGCGAAACGCAACGGGTCAGCGAAGATG
CCGAAGTCCTCAACCGGTTTGAGACTTGCAAGACATTACGACGCCAAATT
CTGCGATACATCCAGCACGTGGAGAGTGAGGAGTTTCTGGGTAGTTTGAT
TCATGCAAACGAAGAGCTAGTCACGGCACTTATGGCATTTGAAGTCCTGG
ACAAGAGTGTAGACTACGACAGTGATAGCGACCAGGATGTCCTAGAGACG
GGGTGGACCCCTGACCGCGACGACCTCCCCGACTCATTCGCAGGGTTGGT
TGTGAACCCCCCGAAGCCACCACGTCCCCCTCGTCCCTTGAGCATATCCG
TACCATCCTCATCAAGGAAAGTCTACAGTGACAGCGAGTCAGAAACGGAA
GACGATGACGATGAAGATAATCCATTTGGCGACCGCAACGCCATCCACAC
CCCTGGCATTGAGAAGCACGAGCCTACCTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24495CAN33_24495Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24495-T1.exon1CAN33_24495-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_24495-T1.exon2CAN33_24495-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24495-T1.exon3CAN33_24495-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_24495-T1.exon4CAN33_24495-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24495-T1.cdsCAN33_24495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24495-T1CAN33_24495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262YQG
DBxrefInterPro:IPR008942
DBxrefInterPro:IPR038425
DBxrefInterPro:IPR002014
DBxrefPFAM:PF00790
ProductVHS domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1718573..1719962 +
Powered by Drupal