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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1498511..1499992+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2450-T1 ID=CAN33_2450-T1|Name=CAN33_2450-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1482bp|location=Sequence derived from alignment at NKJJ01000004.1:1498511..1499992+ (Aspergillus niger FDAARGOS_311)
ATGACCGCGTGCGACATGGCAGGGATCCTGACTCTTGCGCTTGTCCTTTT
CCCACCCCGTCTCTAGACAGTGGATCCCTGTCTGCTTGCTCCAGCTAACA
CTTTCTCCCTCTACTAGCTTTCTTTGACGCATTTCTGCGAGGTGCATGGT
CCTACCTCGATCATCTGCTCGCAGGTCCTACCGTTCCCTTGTTCACAATG
CTATCCCGACAAATCTGATTCCTCTCCCGACGAAACCCCTGCCACCTCTC
ACGACACCGTTTCATCCCACGGCCTGCAGAGCCGCGCGAATACTAAATCT
ACCCCAAATAAACTCTCGGAAAAGAACATCGACTCCTCCGACAGGTCTCC
CAGGATAGAAGACCATCCCTATTTCCTCAAAGGCCAGGCCACGCCGGCTG
ACACTCAACAACGACCCAACTTCCTCGGCGGCGCAGACGGCGACACGTGC
GCCAGTTGCAGCTTGACTCTCCCTGAAGATGTGAGCAAGCAGCTGCCCCC
AGGTGCGCCAGGAACGGCCCGAAGTGACGGCAAAGGGAGGAACGGCAGTC
CGGTTTTGCGATCGAGAGAGGTCGTCTACTCTTGTGGGACCAGTCACGCC
GACCACGATGATACCACACACGACCCGCATGCTCATGCTTCATACCCCGA
CTCCCTTCATTCGGCCTCTGTTACATCGGACGCCTCCTGTCATACACACA
TCCTCACCTATCTTTCATTGCGCGGACCTCCCAATCCGGCTGATTACGCG
CTTCTGCGACGTTCCTCCATTCGAACCCTGAGTTGCGAACTTTTGCCACG
CGGTCTTTCCTCGGGCCCTCTATGTTTTGGCGATTCTACCGCTGGCTATA
CGATAGCTTACATCTTTCGCCTGCCCGACCCCATGGCTCGCGGGAAACGG
CGTAGCTATGCCCTTGTCGCATTGGCAGGAAAAGATGCCGGACGAGCCTT
CCGTGCCTGTCCTGTGATTTGGCGCGCATTTGGTCGGATTGCCACGGGCA
TTGTCAACTCAGCGGAGAAATACCAGGAAGAAGAAAAGCGTCGCGATGAA
CAAAACAACGCATCGAATAGACGCGGGAGCAAGCAGTATACACCTGTTTC
CTCTTTCCTCACAGGGCGCGCCCTTGACCCAGATGGACAGCTTCGCAGAC
CCGGTCAAGTGCGAGCGAGAAACCTTTCGGAAATCGTGGGAAACCAATAC
ATCTTTGCTGAAATACATGCACACTTTGTTGCGCTCCTGCAGCAGCTGGG
TACGATGTTTGGAGCCTCACCTATTTCAGAAGAACGATTCGTGTGCAGCA
CAGTGCGCGAAGAAGACGCCACTGCTTCACGGAAATCATCATTAGTTCCT
GGTGGCAAGGAGAAGCCGCAGGATAAGCTTTCGCGACAATACGAGGACAG
CGATCTGGGAATGTCCACTTTGGACATCTCCTCGGGGCCTAAGCCGATCC
CCATCGCACCTCGCCGACCAGTGATCGCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1498511..1499992+ >CAN33_2450-T1 ID=CAN33_2450-T1|Name=CAN33_2450-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2814bp|location=Sequence derived from alignment at NKJJ01000004.1:1498511..1499992+ (Aspergillus niger FDAARGOS_311)
ATGACCGCGTGCGACATGGCAGGGATCCTGACTCTTGCGCTTCTTTCTTT
GACGCATTTCTGCGAGGTGCATGGTCCTACCTCGATCATCTGCTCGCAGG
TCCTACCGTTCCCTTGTTCACAATGCTATCCCGACAAATCTGATTCCTCT
CCCGACGAAACCCCTGCCACCTCTCACGACACCGTTTCATCCCACGGCCT
GCAGAGCCGCGCGAATACTAAATCTACCCCAAATAAACTCTCGGAAAAGA
ACATCGACTCCTCCGACAGGTCTCCCAGGATAGAAGACCATCCCTATTTC
CTCAAAGGCCAGGCCACGCCGGCTGACACTCAACAACGACCCAACTTCCT
CGGCGGCGCAGACGGCGACACGTGCGCCAGTTGCAGCTTGACTCTCCCTG
AAGATGTGAGCAAGCAGCTGCCCCCAGGTGCGCCAGGAACGGCCCGAAGT
GACGGCAAAGGGAGGAACGGCAGTCCGGTTTTGCGATCGAGAGAGGTCGT
CTACTCTTGTGGGACCAGTCACGCCGACCACGATGATACCACACACGACC
CGCATGCTCATGCTTCATACCCCGACTCCCTTCATTCGGCCTCTGTTACA
TCGGACGCCTCCTGTCATACACACATCCTCACCTATCTTTCATTGCGCGG
ACCTCCCAATCCGGCTGATTACGCGCTTCTGCGACGTTCCTCCATTCGAA
CCCTGAGTTGCGAACTTTTGCCACGCGGTCTTTCCTCGGGCCCTCTATGT
TTTGGCGATTCTACCGCTGGCTATACGATAGCTTACATCTTTCGCCTGCC
CGACCCCATGGCTCGCGGGAAACGGCGTAGCTATGCCCTTGTCGCATTGG
CAGGAAAAGATGCCGGACGAGCCTTCCGTGCCTGTCCTGTGATTTGGCGC
GCATTTGGTCGGATTGCCACGGGCATTGTCAACTCAGCGGAGAAATACCA
GGAAGAAGAAAAGCGTCGCGATGAACAAAACAACGCATCGAATAGACGCG
GGAGCAAGCAGTATACACCTGTTTCCTCTTTCCTCACAGGGCGCGCCCTT
GACCCAGATGGACAGCTTCGCAGACCCGGTCAAGTGCGAGCGAGAAACCT
TTCGGAAATCGTGGGAAACCAATACATCTTTGCTGAAATACATGCACACT
TTGTTGCGCTCCTGCAGCAGCTGGGTACGATGTTTGGAGCCTCACCTATT
TCAGAAGAACGATTCGTGTGCAGCACAGTGCGCGAAGAAGACGCCACTGC
TTCACGGAAATCATCATTAGTTCCTGGTGGCAAGGAGAAGCCGCAGGATA
AGCTTTCGCGACAATACGAGGACAGCGATCTGGGAATGTCCACTTTGGAC
ATCTCCTCGGGGCCTAAGCCGATCCCCATCGCACCTCGCCGACCAGTGAT
CGCTTAGATGACCGCGTGCGACATGGCAGGGATCCTGACTCTTGCGCTTC
TTTCTTTGACGCATTTCTGCGAGGTGCATGGTCCTACCTCGATCATCTGC
TCGCAGGTCCTACCGTTCCCTTGTTCACAATGCTATCCCGACAAATCTGA
TTCCTCTCCCGACGAAACCCCTGCCACCTCTCACGACACCGTTTCATCCC
ACGGCCTGCAGAGCCGCGCGAATACTAAATCTACCCCAAATAAACTCTCG
GAAAAGAACATCGACTCCTCCGACAGGTCTCCCAGGATAGAAGACCATCC
CTATTTCCTCAAAGGCCAGGCCACGCCGGCTGACACTCAACAACGACCCA
ACTTCCTCGGCGGCGCAGACGGCGACACGTGCGCCAGTTGCAGCTTGACT
CTCCCTGAAGATGTGAGCAAGCAGCTGCCCCCAGGTGCGCCAGGAACGGC
CCGAAGTGACGGCAAAGGGAGGAACGGCAGTCCGGTTTTGCGATCGAGAG
AGGTCGTCTACTCTTGTGGGACCAGTCACGCCGACCACGATGATACCACA
CACGACCCGCATGCTCATGCTTCATACCCCGACTCCCTTCATTCGGCCTC
TGTTACATCGGACGCCTCCTGTCATACACACATCCTCACCTATCTTTCAT
TGCGCGGACCTCCCAATCCGGCTGATTACGCGCTTCTGCGACGTTCCTCC
ATTCGAACCCTGAGTTGCGAACTTTTGCCACGCGGTCTTTCCTCGGGCCC
TCTATGTTTTGGCGATTCTACCGCTGGCTATACGATAGCTTACATCTTTC
GCCTGCCCGACCCCATGGCTCGCGGGAAACGGCGTAGCTATGCCCTTGTC
GCATTGGCAGGAAAAGATGCCGGACGAGCCTTCCGTGCCTGTCCTGTGAT
TTGGCGCGCATTTGGTCGGATTGCCACGGGCATTGTCAACTCAGCGGAGA
AATACCAGGAAGAAGAAAAGCGTCGCGATGAACAAAACAACGCATCGAAT
AGACGCGGGAGCAAGCAGTATACACCTGTTTCCTCTTTCCTCACAGGGCG
CGCCCTTGACCCAGATGGACAGCTTCGCAGACCCGGTCAAGTGCGAGCGA
GAAACCTTTCGGAAATCGTGGGAAACCAATACATCTTTGCTGAAATACAT
GCACACTTTGTTGCGCTCCTGCAGCAGCTGGGTACGATGTTTGGAGCCTC
ACCTATTTCAGAAGAACGATTCGTGTGCAGCACAGTGCGCGAAGAAGACG
CCACTGCTTCACGGAAATCATCATTAGTTCCTGGTGGCAAGGAGAAGCCG
CAGGATAAGCTTTCGCGACAATACGAGGACAGCGATCTGGGAATGTCCAC
TTTGGACATCTCCTCGGGGCCTAAGCCGATCCCCATCGCACCTCGCCGAC
CAGTGATCGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-23) |
| DBxref | InterPro:IPR037521 |
| DBxref | InterPro:IPR037520 |
| DBxref | PFAM:PF11704 |
| Product | Vesicle coat protein involved in Golgi to plasma membrane transport family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1498511..1499992 + |
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