You are here

Home

CAN33_24515-T1, CAN33_24515-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24515-T1
Unique NameCAN33_24515-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1728657..1729810-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24515-T1 ID=CAN33_24515-T1|Name=CAN33_24515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1154bp|location=Sequence derived from alignment at NKJJ01000002.1:1728657..1729810- (Aspergillus niger FDAARGOS_311)
ATGTTCGACCTCCCCAGCGCAAAGCGGTACGTCAAATACACCAACCTACT
AGCCTCAATTCCAACTTCAATCCCACTAACCCACGCCCCAACCACAGCGT
CCGTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTCTC
CACCCCCAGAATCCTCTCTCACAGACGTCCACCAACGTCTCGGCGCCCTC
CTAGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCCCCGCAACC
AACGACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATTCC
GACTGTTCAGCGCCCCTGCGAAATCCGAATCTAAAAAGGAAGAGCAAGCA
GCTGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGGGTACG
CTCACCCACGCCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGTGAATC
CGTTTCGCGGATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGGCTGGG
GTTAAGGAGGATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAGAAGAG
GAGACAGTTTGAGGACGCGGCTGTTTCGGGGTTGCAGGTGGTAAGGTTTG
CAGGTGTGGAGTGGGTAAGTCTACTTTTTTCTTTACTACCTTGAGCTCTA
TTGGAGTGGCTGAGTGGATGTTTTGCTGACACTTTCTGCGCTCTAGCCCG
GGTGTCATCTCCCGTGGAGGGTTGTGACACTGAAGAGTGAGAAGAAGGGT
AAGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGCCGAC
GTCTTTGAAGAAGCCGGGCAAGAAGCGCCGGATTCAGTTGCGGAAGCGGG
TCTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTTGTTG
GAGGCGGAGAAGCGGAATCGGAAGAATCGCGAGAAGAAGATCAAGCGGAG
GCAGAAGGCGAGAGAGGAGAAGGCTGCTAAGGCTGCCGCTGCTGCTGCGA
CTGGTGGTGGTGAGGCTCCGGCTGGTCAGATGGATGTGGATGTGTCTTCG
GATGAGGGCAGCGATTGACGGGATTGGTTATTTTATTGAGTGTATGTTCT
TCTAGCTCAGTTTCCGCTTATGATACCCAGGTTGATATCGAATCATGGAT
TTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:1728657..1729810-

>CAN33_24515-T1 ID=CAN33_24515-T1|Name=CAN33_24515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2292bp|location=Sequence derived from alignment at NKJJ01000002.1:1728657..1729810- (Aspergillus niger FDAARGOS_311)
CTCAGTTTCCGCTTATGATACCCAGGTTGATATCGAATCATGGATTTGAC
CCGGGTGTCATCTCCCGTGGAGGGTTGTGACACTGAAGAGTGAGAAGAAG
GGTAAGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGCC
GACGTCTTTGAAGAAGCCGGGCAAGAAGCGCCGGATTCAGTTGCGGAAGC
GGGTCTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTTC
GTCCGTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTC
TCCACCCCCAGAATCCTCTCTCACAGACGTCCACCAACGTCTCGGCGCCC
TCCTAGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCCCCGCAA
CCAACGACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATT
CCGACTGTTCAGCGCCCCTGCGAAATCCGAATCTAAAAAGGAAGAGCAAG
CAGCTGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGGATG
TTCGACCTCCCCAGCGCAAAGCGCTCAGTTTCCGCTTATGATACCCAGGT
TGATATCGAATCATGGATTTGACCCGGGTGTCATCTCCCGTGGAGGGTTG
TGACACTGAAGAGTGAGAAGAAGGGTAAGGGTGCGGCGGTGACGTGCGCG
AAGGACCCTGCGGAGAGGGCGCCGACGTCTTTGAAGAAGCCGGGCAAGAA
GCGCCGGATTCAGTTGCGGAAGCGGGTCTCGGCTGCGGATGAGAGAAAGA
AGAAAGAGGAGGAGAAGAAGTTCGTCCGTCGCGAAGAACTCCTATCCCGA
ACATCCACCTCGCCCTCCCCCTCTCCACCCCCAGAATCCTCTCTCACAGA
CGTCCACCAACGTCTCGGCGCCCTCCTAGACATCGACGCCCTCCTCGCGC
CACAACCCGACCCATCCCCGCAACCAACGACCGAAGCCAACCCCGACGAA
GACGAAGAACAAGAGTTCGAATTCCGACTGTTCAGCGCCCCTGCGAAATC
CGAATCTAAAAAGGAAGAGCAAGCAGCTGTCGAGTCCAGCACAACTCAAG
CCCAGAAATTACGCATCCGGATGTTCGACCTCCCCAGCGCAAAGCGCTCA
GTTTCCGCTTATGATACCCAGGTTGATATCGAATCATGGATTTGACCCGG
GTGTCATCTCCCGTGGAGGGTTGTGACACTGAAGAGTGAGAAGAAGGGTA
AGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGCCGACG
TCTTTGAAGAAGCCGGGCAAGAAGCGCCGGATTCAGTTGCGGAAGCGGGT
CTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTTCGTCC
GTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTCTCCA
CCCCCAGAATCCTCTCTCACAGACGTCCACCAACGTCTCGGCGCCCTCCT
AGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCCCCGCAACCAA
CGACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATTCCGA
CTGTTCAGCGCCCCTGCGAAATCCGAATCTAAAAAGGAAGAGCAAGCAGC
TGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGGATGTTCG
ACCTCCCCAGCGCAAAGCGCTCAGTTTCCGCTTATGATACCCAGGTTGAT
ATCGAATCATGGATTTGACCCGGGTGTCATCTCCCGTGGAGGGTTGTGAC
ACTGAAGAGTGAGAAGAAGGGTAAGGGTGCGGCGGTGACGTGCGCGAAGG
ACCCTGCGGAGAGGGCGCCGACGTCTTTGAAGAAGCCGGGCAAGAAGCGC
CGGATTCAGTTGCGGAAGCGGGTCTCGGCTGCGGATGAGAGAAAGAAGAA
AGAGGAGGAGAAGAAGTTCGTCCGTCGCGAAGAACTCCTATCCCGAACAT
CCACCTCGCCCTCCCCCTCTCCACCCCCAGAATCCTCTCTCACAGACGTC
CACCAACGTCTCGGCGCCCTCCTAGACATCGACGCCCTCCTCGCGCCACA
ACCCGACCCATCCCCGCAACCAACGACCGAAGCCAACCCCGACGAAGACG
AAGAACAAGAGTTCGAATTCCGACTGTTCAGCGCCCCTGCGAAATCCGAA
TCTAAAAAGGAAGAGCAAGCAGCTGTCGAGTCCAGCACAACTCAAGCCCA
GAAATTACGCATCCGGATGTTCGACCTCCCCAGCGCAAAGCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24515CAN33_24515Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24515-T1CAN33_24515-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24515-T1.cdsCAN33_24515-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24515-T1.exon4CAN33_24515-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_24515-T1.exon3CAN33_24515-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_24515-T1.exon2CAN33_24515-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24515-T1.exon1CAN33_24515-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
ProductFungal protein of unknown function (DUF2011) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1728657..1729810 -
Powered by Drupal