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CAN33_24520-T1, CAN33_24520-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24520-T1
Unique NameCAN33_24520-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1730855..1731384+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24520-T1 ID=CAN33_24520-T1|Name=CAN33_24520-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=530bp|location=Sequence derived from alignment at NKJJ01000002.1:1730855..1731384+ (Aspergillus niger FDAARGOS_311)
ATGGGTATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGA
TGTAAGTTCAATCCTATAGTCCTTTACCGAAAAACAAGCGCACGCAACCA
ACACTCCTCCCTCCCTTTGCGCCCGACTCCACCAACCCTCTTCGCATCCA
TCATCTAGATGCCAAAACTAACTTATCTCCATCACCACAGCCCAACCACC
CCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCTACGGT
TACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCAGATCCGAGCTA
CCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCAGCGGACATCAG
AGTGAGCCACCCTTCACCACCAGTATGACAGAGATAGAGTATAGTCCAAT
ACTGATAACGTGCAACAGTTCCGTTATCGACATCTGGTCGCTCCAACCCC
AACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCTCCTT
CATCCTCCGATGGCGATGCGCCGCCCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1730855..1731384+

>CAN33_24520-T1 ID=CAN33_24520-T1|Name=CAN33_24520-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=972bp|location=Sequence derived from alignment at NKJJ01000002.1:1730855..1731384+ (Aspergillus niger FDAARGOS_311)
ATGGGTATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGA
TCCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAAC
CGGGCTACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCA
GATCCGAGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCA
GCGGACATCAGATTCCGTTATCGACATCTGGTCGCTCCAACCCCAACCGC
ATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCTCCTTCATCCT
CCGATGGCGATGCGCCGCCCGTGAATGGGTATCTGCGCCTCATGTCTCGG
ACGTAATCGTCAGGAACCCCACGATCCCAACCACCCCGAATCTTCCCGCC
TCCTCGATGAAGACATCTACCAACCGGGCTACGGTTACGGCGCCCTTCAC
CAAAGCACCCAAGGCAACCACCCAGATCCGAGCTACCTGAAGCGCGAACG
AGAAGCCCTTGAAGCAATCTGCCAGCGGACATCAGATTCCGTTATCGACA
TCTGGTCGCTCCAACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCC
AGCACTGTCCCCCTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAT
GGGTATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGATC
CCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCG
GGCTACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCAGA
TCCGAGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCAGC
GGACATCAGATTCCGTTATCGACATCTGGTCGCTCCAACCCCAACCGCAT
CTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCTCCTTCATCCTCC
GATGGCGATGCGCCGCCCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0045121membrane raft
GO:0031902late endosome membrane
GO:0071986Ragulator complex
Vocabulary: Biological Process
TermDefinition
GO:0001919regulation of receptor recycling
GO:0007040lysosome organization
GO:0042632cholesterol homeostasis
GO:0016197endosomal transport
GO:0071230cellular response to amino acid stimulus
GO:0043410positive regulation of MAPK cascade
GO:0032008positive regulation of TOR signaling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24520CAN33_24520Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24520-T1.exon1CAN33_24520-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_24520-T1.exon2CAN33_24520-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24520-T1.exon3CAN33_24520-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24520-T1.cdsCAN33_24520-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24520-T1CAN33_24520-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR028209
DBxrefPFAM:PF15454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1730855..1731384 +
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