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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1735297..1736053+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24530-T1 ID=CAN33_24530-T1|Name=CAN33_24530-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=757bp|location=Sequence derived from alignment at NKJJ01000002.1:1735297..1736053+ (Aspergillus niger FDAARGOS_311)
ATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACC
CGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTG
ATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGGT
GCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACC
CCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTGTCGATAGGGGCA
AAGGCAAGTAAAACCCTCTAGTCATCATCTACTACGAGTGCTATCACGTA
TCCACTGCCTCGAATTGTTTTGAATTCTTTCTCGCTCGAAAGTCAGCTTT
TCCGAGCTCCAAACTGGCCCCTCACTTTCCTAGTAACGTCATGTGGCTTA
TCGGGACAAGCCATATACTTGTCCGGAAACTAACGATGCAGCAGTTACCG
TGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTC
AAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAA
GAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATGTCAACAGTG
TATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGGTAAGC
CGCCTTGATACGTGGATTCGAGCCACCCATTTACTGACAGCATTCAGTGT
TTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCCGCTTT
TGGCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1735297..1736053+ >CAN33_24530-T1 ID=CAN33_24530-T1|Name=CAN33_24530-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1224bp|location=Sequence derived from alignment at NKJJ01000002.1:1735297..1736053+ (Aspergillus niger FDAARGOS_311)
ATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACC
CGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTG
ATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGTT
ACCGTGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGT
GTTCAAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCA
GGAAGAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATGTCAAC
AGTGTATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGTG
TTTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCCGCTT
TTGGCTGAATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCA
CCCAAACCCGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACA
ATCTTCTGATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACA
AGCACGTTACCGTGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAG
AACCGCGTGTTCAAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAA
ATTTCTCAGGAAGAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTT
ATGTCAACAGTGTATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTG
TGGAGGTGTTTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGAC
GCCCGCTTTTGGCTGAATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCC
AAAACTCACCCAAACCCGACCAGGCCAAACTCGCTCACAGGCCAGCCAAT
CGTAAACAATCTTCTGATTCTTCCTCGAATACCCAAAATGCACCTATACC
AGACGACAAGCACGTTACCGTGCGCTTTCAGCCACTGCCTTCAGCTCCCA
TCCTGAAGAACCGCGTGTTCAAGATTAGTGCCTCGCAAAAGTTCGAAACA
GTCGTGAAATTTCTCAGGAAGAAGCTGGACTGTAAAGAATCCGACTCGGT
TTTCTGTTATGTCAACAGTGTATTTGCCCCTGGGTTAGACGAAGGTGTTG
GTGGGTTGTGGAGGTGTTTCAAGACTGACGAGCAACTTATCGTCGCTTAC
TCTATGACGCCCGCTTTTGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000045 | autophagosome assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265EKJ |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR007242 |
| DBxref | PFAM:PF04110 |
| Product | Ubiquitin-like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1735297..1736053 + |
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