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CAN33_24740-T1, CAN33_24740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24740-T1
Unique NameCAN33_24740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1842830..1843928-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24740-T1 ID=CAN33_24740-T1|Name=CAN33_24740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1099bp|location=Sequence derived from alignment at NKJJ01000002.1:1842830..1843928- (Aspergillus niger FDAARGOS_311)
ATGTGTACGTCTGGGACTTAGCGACAGGCACACTGCAGCAAACTGTTGAT
GGCCATATGTCCTCAGGCTTCAGAGGTTCTGGAGCCTCTGATGCAGTAGC
ATTTACACCTGACGGCAAGACACTGGCGTCCTGCTCTGCTGATGAAACAA
TACGTCTTTGGGACCTCACGGCGAGTGAGGTCACCCAAAACCATAACAGC
GATAGCTTTGAGCCTCCCCCTCAGATCATGACCTTCTCACCCGATGGCCT
TTTCCTAGCATCCGGCTCTTATGAGAGTCCGGTTGTGCGTATTTGGAATG
TAACGGAAGGTACAATCGCCTGGACTCTCGATGAGCATTCTGCTGCGATT
GAATCATTGGCCTTCTCACCAGATAATCGGATACTGGTGACCTGCTCTGC
AGATAACAGCGCATGCCTCTGGGACTTGACGACACGCACCCTTCTGCACA
CTATCGATAGCCACTCGGAATCCGTGAACTCTGTGGCGTTCTCTCCTAAT
GGTCAACTATTAGCATCCTGCTCTGATGACGATACAGTGTGTATCTGGGA
CTTTGCGACATACACACTACAACAGACTCTCATAGCCTGTCCTCATTCAG
GTGACTCAATTGGCGGCTATAAATCGGTAACTTTCTCACCTGATGGTAAG
TTACTAGCGTCTGGTACATATAGTGGCCTACTGTGCGTCTGGGACTTGGT
GACAGGCGCAATATATCGGACTATTAATGCTCATCTGGATACTATTGAGT
ATTTGGCCTTCGATCCTGATAGCCAATTACTGGCCTCCTGCTCTAGTGAT
GACACAATGCGCCTCTGGGCCTTGGAGGAGTATGCGCTCGTGCAAATTTG
GGACATCGAATGGGATGGCGATTCTTGCGGATTTTCCCATTATTTCGAAT
TTTTCCATGACGATCTATCTATTCATGGCAATTCAGCTGCATTTGTCGTT
GAACGTGGATCCGACCGCCAAATGTTATTATCACGTTCTGGGAATCTGGA
CATCTCTTTTGAGACCGAACGATGGGTAAAATTGCGCGGCAAACGAAAGC
TCTGGCTTCCTGTTGAGTATAAGCCTAACTGCTTTAGGATAAACGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1842830..1843928-

>CAN33_24740-T1 ID=CAN33_24740-T1|Name=CAN33_24740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3660bp|location=Sequence derived from alignment at NKJJ01000002.1:1842830..1843928- (Aspergillus niger FDAARGOS_311)
GATAAACGGTGAGCGCAATATATCGGACTATTAATGCTCATCTGGATACT
ATTGAGTATTTGGCCTTCGATCCTGATAGCCAATTACTGGCCTCCTGCTC
TAGTGATGACACAATGCGCCTCTGGGCCTTGGAGGAGTATGCGCTCGTGC
AAATTTGGGACATCGAATGGGATGGCGATTCTTGCGGATTTTCCCATTAT
TTCGAATTTTTCCATGACGATCTATCTATTCATGGCAATTCAGCTGCATT
TGTCGTTGAACGTGGATCCGACCGCCAAATGTTATTATCACGTTCTGGGA
ATCTGGACATCTCTTTTGAGACCGAACGATGGGCTTCAGAGGTTCTGGAG
CCTCTGATGCAGTAGCATTTACACCTGACGGCAAGACACTGGCGTCCTGC
TCTGCTGATGAAACAATACGTCTTTGGGACCTCACGGCGAGTGAGGTCAC
CCAAAACCATAACAGCGATAGCTTTGAGCCTCCCCCTCAGATCATGACCT
TCTCACCCGATGGCCTTTTCCTAGCATCCGGCTCTTATGAGAGTCCGGTT
GTGCGTATTTGGAATGTAACGGAAGGTACAATCGCCTGGACTCTCGATGA
GCATTCTGCTGCGATTGAATCATTGGCCTTCTCACCAGATAATCGGATAC
TGGTGACCTGCTCTGCAGATAACAGCGCATGCCTCTGGGACTTGACGACA
CGCACCCTTCTGCACACTATCGATAGCCACTCGGAATCCGTGAACTCTGT
GGCGTTCTCTCCTAATGGTCAACTATTAGCATCCTGCTCTGATGACGATA
CAGTGTGTATCTGGGACTTTGCGACATACACACTACAACAGACTCTCATA
GCCTGTCCTCATTCAGGTGACTCAATTGGCGGCTATAAATCGGTAACTTT
CTCACCTGATGATGTGATAAACGGTGAGCGCAATATATCGGACTATTAAT
GCTCATCTGGATACTATTGAGTATTTGGCCTTCGATCCTGATAGCCAATT
ACTGGCCTCCTGCTCTAGTGATGACACAATGCGCCTCTGGGCCTTGGAGG
AGTATGCGCTCGTGCAAATTTGGGACATCGAATGGGATGGCGATTCTTGC
GGATTTTCCCATTATTTCGAATTTTTCCATGACGATCTATCTATTCATGG
CAATTCAGCTGCATTTGTCGTTGAACGTGGATCCGACCGCCAAATGTTAT
TATCACGTTCTGGGAATCTGGACATCTCTTTTGAGACCGAACGATGGGCT
TCAGAGGTTCTGGAGCCTCTGATGCAGTAGCATTTACACCTGACGGCAAG
ACACTGGCGTCCTGCTCTGCTGATGAAACAATACGTCTTTGGGACCTCAC
GGCGAGTGAGGTCACCCAAAACCATAACAGCGATAGCTTTGAGCCTCCCC
CTCAGATCATGACCTTCTCACCCGATGGCCTTTTCCTAGCATCCGGCTCT
TATGAGAGTCCGGTTGTGCGTATTTGGAATGTAACGGAAGGTACAATCGC
CTGGACTCTCGATGAGCATTCTGCTGCGATTGAATCATTGGCCTTCTCAC
CAGATAATCGGATACTGGTGACCTGCTCTGCAGATAACAGCGCATGCCTC
TGGGACTTGACGACACGCACCCTTCTGCACACTATCGATAGCCACTCGGA
ATCCGTGAACTCTGTGGCGTTCTCTCCTAATGGTCAACTATTAGCATCCT
GCTCTGATGACGATACAGTGTGTATCTGGGACTTTGCGACATACACACTA
CAACAGACTCTCATAGCCTGTCCTCATTCAGGTGACTCAATTGGCGGCTA
TAAATCGGTAACTTTCTCACCTGATGATGTGATAAACGGTGAGCGCAATA
TATCGGACTATTAATGCTCATCTGGATACTATTGAGTATTTGGCCTTCGA
TCCTGATAGCCAATTACTGGCCTCCTGCTCTAGTGATGACACAATGCGCC
TCTGGGCCTTGGAGGAGTATGCGCTCGTGCAAATTTGGGACATCGAATGG
GATGGCGATTCTTGCGGATTTTCCCATTATTTCGAATTTTTCCATGACGA
TCTATCTATTCATGGCAATTCAGCTGCATTTGTCGTTGAACGTGGATCCG
ACCGCCAAATGTTATTATCACGTTCTGGGAATCTGGACATCTCTTTTGAG
ACCGAACGATGGGCTTCAGAGGTTCTGGAGCCTCTGATGCAGTAGCATTT
ACACCTGACGGCAAGACACTGGCGTCCTGCTCTGCTGATGAAACAATACG
TCTTTGGGACCTCACGGCGAGTGAGGTCACCCAAAACCATAACAGCGATA
GCTTTGAGCCTCCCCCTCAGATCATGACCTTCTCACCCGATGGCCTTTTC
CTAGCATCCGGCTCTTATGAGAGTCCGGTTGTGCGTATTTGGAATGTAAC
GGAAGGTACAATCGCCTGGACTCTCGATGAGCATTCTGCTGCGATTGAAT
CATTGGCCTTCTCACCAGATAATCGGATACTGGTGACCTGCTCTGCAGAT
AACAGCGCATGCCTCTGGGACTTGACGACACGCACCCTTCTGCACACTAT
CGATAGCCACTCGGAATCCGTGAACTCTGTGGCGTTCTCTCCTAATGGTC
AACTATTAGCATCCTGCTCTGATGACGATACAGTGTGTATCTGGGACTTT
GCGACATACACACTACAACAGACTCTCATAGCCTGTCCTCATTCAGGTGA
CTCAATTGGCGGCTATAAATCGGTAACTTTCTCACCTGATGATGTGATAA
ACGGTGAGCGCAATATATCGGACTATTAATGCTCATCTGGATACTATTGA
GTATTTGGCCTTCGATCCTGATAGCCAATTACTGGCCTCCTGCTCTAGTG
ATGACACAATGCGCCTCTGGGCCTTGGAGGAGTATGCGCTCGTGCAAATT
TGGGACATCGAATGGGATGGCGATTCTTGCGGATTTTCCCATTATTTCGA
ATTTTTCCATGACGATCTATCTATTCATGGCAATTCAGCTGCATTTGTCG
TTGAACGTGGATCCGACCGCCAAATGTTATTATCACGTTCTGGGAATCTG
GACATCTCTTTTGAGACCGAACGATGGGCTTCAGAGGTTCTGGAGCCTCT
GATGCAGTAGCATTTACACCTGACGGCAAGACACTGGCGTCCTGCTCTGC
TGATGAAACAATACGTCTTTGGGACCTCACGGCGAGTGAGGTCACCCAAA
ACCATAACAGCGATAGCTTTGAGCCTCCCCCTCAGATCATGACCTTCTCA
CCCGATGGCCTTTTCCTAGCATCCGGCTCTTATGAGAGTCCGGTTGTGCG
TATTTGGAATGTAACGGAAGGTACAATCGCCTGGACTCTCGATGAGCATT
CTGCTGCGATTGAATCATTGGCCTTCTCACCAGATAATCGGATACTGGTG
ACCTGCTCTGCAGATAACAGCGCATGCCTCTGGGACTTGACGACACGCAC
CCTTCTGCACACTATCGATAGCCACTCGGAATCCGTGAACTCTGTGGCGT
TCTCTCCTAATGGTCAACTATTAGCATCCTGCTCTGATGACGATACAGTG
TGTATCTGGGACTTTGCGACATACACACTACAACAGACTCTCATAGCCTG
TCCTCATTCAGGTGACTCAATTGGCGGCTATAAATCGGTAACTTTCTCAC
CTGATGATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24740CAN33_24740Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24740-T1CAN33_24740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24740-T1.cdsCAN33_24740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24740-T1.exon4CAN33_24740-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_24740-T1.exon3CAN33_24740-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_24740-T1.exon2CAN33_24740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24740-T1.exon1CAN33_24740-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1842830..1843928 -
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