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CAN33_2475-T1, CAN33_2475-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2475-T1
Unique NameCAN33_2475-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1517994..1519738-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2475-T1 ID=CAN33_2475-T1|Name=CAN33_2475-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1745bp|location=Sequence derived from alignment at NKJJ01000004.1:1517994..1519738- (Aspergillus niger FDAARGOS_311)
ATGGTCACCGCTCCTTCTACCTCCGCGGCCCGGAAGGACACCACTTTGTC
CCGAAGGTATATTGAGGGCCTGATTTCAGAAGGCAAGCATGTCATCATCT
TCGACGGTCGCGTACTCAGAGTCGATGCTTGGATTCCCTACCATCCCGGA
GGAGACAAGTCCATCAGGCACATGGTTGGGAAAGATGCCACGGATGAGAT
CAACGCGTATGTGGCCCATGAACCCCGGGATGCCCGGATGCGAACAGACC
GTTGACTCCGACGTTTCTCTTCTACAGGTTACACTCCAAAGAAGCGCGCC
AACGAATGTTGTCCTTTCAGATCGGTCGCATCGAGGGCCCATGGGTGAAC
TTCCTGCCGCCCATCCAGGGCGGAAAGTTTCGTCCCTATACCGAGGATTG
TTTGTCCGATGAAGAGAGCTCTGGTCAAGAGAGTTCCGGTCAGGAAACGT
CACAGCCACCATCCCCGATCTTTGATGCCGTCGATAGCACGTCAGGTGCT
CGTCAGCGGAAACCTGCGCCCGCAACCCCAGCCTCGACCGCCAAAAGCGA
AGAGTTCAAACCGAAACCGTTCTTTCTCGATGCGCGTACGCAGGAAGAAC
TCGTCTTCGATACGGCCAAATACCCCTCCCTAGATTTGGAAAATCAGGAG
AAGATCAAGCAGAGGTATCGTGAGCTGGACCAGCAGATCCGTGCAGAGGG
GCTTTATGACTGTCGCTACTTCTCGTACTTTATCGAATGCTGCCGATATA
CGCTCTTCGCTGCCTTGTCCTACTATTTCCTACAGATTGGATGGTATGCG
ACTTCGGGATTCTTCCTTGGATGCTTTTGGCATCAGCTTGTCTTTACTGC
CCATGATGCTGGTCATATGGGCATTACGCACAATTTTCACGTCGACACGG
TGATTGGTATCATTATCGCCGACTACCTTGGAGGACTCAGCCTTGGGTGG
TGGAAACGCAGCCACAATGTCCACCATATCGTGACAAACGCCCCCGAACA
CGACCCGGATATCGAACACATGCCATTCTTCGCCGTTTCCCATCGCTTCC
TTACCAGCCTTCGCAGCACCTACTACGACCGCATCATGGAATTTGATGCT
GCTGCAAACTTCCTTCTCCGCTTCCAGAACTACCTCTACTACCCTATCCT
CCTGTTTGGACGTTTCAACTTGTATCGCCTGAGCTGGGAGTACCTCTTCA
TGGGCCAAGCCCCGAAAAAAGGTCCCGCCTGGTGGCATCGGTGGTTTGAG
ATTGGCGGCCAGGTCTTTTTCTGGATCTGGTTTGGCTATGGAGTGATGTA
CCGGTCGATCCCCGACTGGAGCAGCCGGCTTTCCTTCCTTTTCATCTCCC
ATATGGTTACCTCTCCGCTGCACGTGCAGATCACACTTTCTCACTTCGCC
ATGTCCACCTCCGACATGGGAGTCAACGAGTCTTTCCCACAACGAATGCT
CCGCACCACCATGGATGTCGACTGCCCGACCTGGCTCGACTTCTTCCACG
GCGGTCTGCAATTCCAAGCCATCCATCATCTCTACCCCCGTATTCCTCGG
CACAATCTGCGTCGGACTCAGCGCCTGGTGCTCGACTTTTGCCGCGACAC
TGGCATCCCTTATACCATCTTCACCTTCTACGATGGTAACAAAGAGGTGA
TTGGCAAACTCGGCGATGTCGCAAAGCAGGTTCGCATTCTTGAAGAGTGC
AGGAAGTCATGCGCGGAGAATGGTGTGTTCTCGGATCATCATTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1517994..1519738-

>CAN33_2475-T1 ID=CAN33_2475-T1|Name=CAN33_2475-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3348bp|location=Sequence derived from alignment at NKJJ01000004.1:1517994..1519738- (Aspergillus niger FDAARGOS_311)
GTTACACTCCAAAGAAGCGCGCCAACGAATGTTGTCCTTTCAGATCGGTC
GCATCGAGGGCCCATGGGTGAACTTCCTGCCGCCCATCCAGGGCGGAAAG
TTTCGTCCCTATACCGAGGATTGTTTGTCCGATGAAGAGAGCTCTGGTCA
AGAGAGTTCCGGTCAGGAAACGTCACAGCCACCATCCCCGATCTTTGATG
CCGTCGATAGCACGTCAGGTGCTCGTCAGCGGAAACCTGCGCCCGCAACC
CCAGCCTCGACCGCCAAAAGCGAAGAGTTCAAACCGAAACCGTTCTTTCT
CGATGCGCGTACGCAGGAAGAACTCGTCTTCGATACGGCCAAATACCCCT
CCCTAGATTTGGAAAATCAGGAGAAGATCAAGCAGAGGTATCGTGAGCTG
GACCAGCAGATCCGTGCAGAGGGGCTTTATGACTGTCGCTACTTCTCGTA
CTTTATCGAATGCTGCCGATATACGCTCTTCGCTGCCTTGTCCTACTATT
TCCTACAGATTGGATGGTATGCGACTTCGGGATTCTTCCTTGGATGCTTT
TGGCATCAGCTTGTCTTTACTGCCCATGATGCTGGTCATATGGGCATTAC
GCACAATTTTCACGTCGACACGGTGATTGGTATCATTATCGCCGACTACC
TTGGAGGACTCAGCCTTGGGTGGTGGAAACGCAGCCACAATGTCCACCAT
ATCGTGACAAACGCCCCCGAACACGACCCGGATATCGAACACATGCCATT
CTTCGCCGTTTCCCATCGCTTCCTTACCAGCCTTCGCAGCACCTACTACG
ACCGCATCATGGAATTTGATGCTGCTGCAAACTTCCTTCTCCGCTTCCAG
AACTACCTCTACTACCCTATCCTCCTGTTTGGACGTTTCAACTTGTATCG
CCTGAGCTGGGAGTACCTCTTCATGGGCCAAGCCCCGAAAAAAGGTCCCG
CCTGGTGGCATCGGTGGTTTGAGATTGGCGGCCAGGTCTTTTTCTGGATC
TGGTTTGGCTATGGAGTGATGTACCGGTCGATCCCCGACTGGAGCAGCCG
GCTTTCCTTCCTTTTCATCTCCCATATGGTTACCTCTCCGCTGCACGTGC
AGATCACACTTTCTCACTTCGCCATGTCCACCTCCGACATGGGAGTCAAC
GAGTCTTTCCCACAACGAATGCTCCGCACCACCATGGATGTCGACTGCCC
GACCTGGCTCGACTTCTTCCACGGCGGTCTGCAATTCCAAGCCATCCATC
ATCTCTACCCCCGTATTCCTCGGCACAATCTGCGTCGGACTCAGCGCCTG
GTGCTCGACTTTTGCCGCGACACTGGCATCCCTTATACCATCTTCACCTT
CTACGATGGTAACAAAGAGGTGATTGGCAAACTCGGCGATGTCGCAAAGC
AGGTTCGCATTCTTGAAGAGTGCAGGAAGTCATGCGCGGAGAATGGTGTG
TTCTCGGATCATCATTGAATGGTCACCGCTCCTTCTACCTCCGCGGCCCG
GAAGGACACCACTTTGTCCCGAAGGTATATTGAGGGCCTGATTTCAGAAG
GCAAGCATGTCATCATCTTCGACGGTCGCGTACTCAGAGTCGATGCTTGG
ATTCCCTACCATCCCGGAGGAGACAAGTCCATCAGGCACATGGTTGGGAA
AGATGCCACGGATGAGATCAACGCGTTACACTCCAAAGAAGCGCGCCAAC
GAATGTTGTCCTTTCAGATCGGTCGCATCGAGGGCCCATGGGTGAACTTC
CTGCCGCCCATCCAGGGCGGAAAGTTTCGTCCCTATACCGAGGATTGTTT
GTCCGATGAAGAGAGCTCTGGTCAAGAGAGTTCCGGTCAGGAAACGTCAC
AGCCACCATCCCCGATCTTTGATGCCGTCGATAGCACGTCAGGTGCTCGT
CAGCGGAAACCTGCGCCCGCAACCCCAGCCTCGACCGCCAAAAGCGAAGA
GTTCAAACCGAAACCGTTCTTTCTCGATGCGCGTACGCAGGAAGAACTCG
TCTTCGATACGGCCAAATACCCCTCCCTAGATTTGGAAAATCAGGAGAAG
ATCAAGCAGAGGTATCGTGAGCTGGACCAGCAGATCCGTGCAGAGGGGCT
TTATGACTGTCGCTACTTCTCGTACTTTATCGAATGCTGCCGATATACGC
TCTTCGCTGCCTTGTCCTACTATTTCCTACAGATTGGATGGTATGCGACT
TCGGGATTCTTCCTTGGATGCTTTTGGCATCAGCTTGTCTTTACTGCCCA
TGATGCTGGTCATATGGGCATTACGCACAATTTTCACGTCGACACGGTGA
TTGGTATCATTATCGCCGACTACCTTGGAGGACTCAGCCTTGGGTGGTGG
AAACGCAGCCACAATGTCCACCATATCGTGACAAACGCCCCCGAACACGA
CCCGGATATCGAACACATGCCATTCTTCGCCGTTTCCCATCGCTTCCTTA
CCAGCCTTCGCAGCACCTACTACGACCGCATCATGGAATTTGATGCTGCT
GCAAACTTCCTTCTCCGCTTCCAGAACTACCTCTACTACCCTATCCTCCT
GTTTGGACGTTTCAACTTGTATCGCCTGAGCTGGGAGTACCTCTTCATGG
GCCAAGCCCCGAAAAAAGGTCCCGCCTGGTGGCATCGGTGGTTTGAGATT
GGCGGCCAGGTCTTTTTCTGGATCTGGTTTGGCTATGGAGTGATGTACCG
GTCGATCCCCGACTGGAGCAGCCGGCTTTCCTTCCTTTTCATCTCCCATA
TGGTTACCTCTCCGCTGCACGTGCAGATCACACTTTCTCACTTCGCCATG
TCCACCTCCGACATGGGAGTCAACGAGTCTTTCCCACAACGAATGCTCCG
CACCACCATGGATGTCGACTGCCCGACCTGGCTCGACTTCTTCCACGGCG
GTCTGCAATTCCAAGCCATCCATCATCTCTACCCCCGTATTCCTCGGCAC
AATCTGCGTCGGACTCAGCGCCTGGTGCTCGACTTTTGCCGCGACACTGG
CATCCCTTATACCATCTTCACCTTCTACGATGGTAACAAAGAGGTGATTG
GCAAACTCGGCGATGTCGCAAAGCAGGTTCGCATTCTTGAAGAGTGCAGG
AAGTCATGCGCGGAGAATGGTGTGTTCTCGGATCATCATTGAATGGTCAC
CGCTCCTTCTACCTCCGCGGCCCGGAAGGACACCACTTTGTCCCGAAGGT
ATATTGAGGGCCTGATTTCAGAAGGCAAGCATGTCATCATCTTCGACGGT
CGCGTACTCAGAGTCGATGCTTGGATTCCCTACCATCCCGGAGGAGACAA
GTCCATCAGGCACATGGTTGGGAAAGATGCCACGGATGAGATCAACGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2475CAN33_2475Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2475-T1CAN33_2475-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2475-T1.cdsCAN33_2475-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2475-T1.exon2CAN33_2475-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2475-T1.exon1CAN33_2475-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR012171
DBxrefInterPro:IPR036400
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR001199
DBxrefPFAM:PF00487
DBxrefPFAM:PF00173
ProductFatty acid desaturase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1517994..1519738 -
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