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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1527633..1528739+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2485-T1 ID=CAN33_2485-T1|Name=CAN33_2485-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1107bp|location=Sequence derived from alignment at NKJJ01000004.1:1527633..1528739+ (Aspergillus niger FDAARGOS_311)
ATGGTCATCAAAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCGT
AAGAACTACCCCAACCATCATCATCATCACCACAGTATTATCTCCAAGAA
AGATCACCTCCCAGCTAACCTCCAAGAAATCCAGTCCGGCCGTGGCATTG
GCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTC
TTCGCCGACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAA
GCAATACGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTCAACG
TCACCGACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGAGAAG
TTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGAGTGAGTCCCATCCA
CCTCCACTCATCCACCATCATCCCTAAAGGATATCTACAACAACCTAGAA
CATAGTACTCTCCCACCAGACTAACTCAAAAGAACTAGGTCGACAACGGC
GTCCACACCCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTCCA
GACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGCCG
CCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCCGA
GACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTCGC
CGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCATGG
CAGTGACGAAGATGGTTGGTAAGTTTCTTCTTTTTCCCCTACCTACATAC
ATACATTATGCAAATTCATTTTCTCTCTAATATATGTTTCACTTCAGGAC
TGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGTGTGCCCCATCTGG
GTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGAACCCCCAGGTGCG
CGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCAGCTGAGAGTGATG
AGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTCGGCAAGTTATGTT
AATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGGCGACCTTGAGGTT
TCATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1527633..1528739+ >CAN33_2485-T1 ID=CAN33_2485-T1|Name=CAN33_2485-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3360bp|location=Sequence derived from alignment at NKJJ01000004.1:1527633..1528739+ (Aspergillus niger FDAARGOS_311)
ATGGTCATCAAAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCTC
CGGCCGTGGCATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCG
CCCGTGTCATCGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCT
GCCGAAGAGAGCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCA
CTTCACTGTCAACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACT
TTATAGTCGAGAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGA
GTCGACAACGGCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTT
CGACCGCGTCCAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCG
CCGAAGCCGCCGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGC
ACCGGCACCCGAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGC
CAACTCTTTCGCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGC
ATGCTTGCATGGCAGTGACGAAGATGGTTGGACTGGATCACTCCGCCGAA
GGCATCCGCTGCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCT
GGACGTCGAGTTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCG
TTATACCAATTAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATT
GTTTATTTGCTTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTT
GTTGGATGCGGCGGTGACGGCGACCTTGAGGTTTCATTGAATGGTCATCA
AAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCTCCGGCCGTGGC
ATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCAT
CGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGA
GCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTC
AACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGA
GAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGAGTCGACAACG
GCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTC
CAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGC
CGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCC
GAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTC
GCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCAT
GGCAGTGACGAAGATGGTTGGACTGGATCACTCCGCCGAAGGCATCCGCT
GCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTCGAG
TTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACCAAT
TAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATTTGC
TTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGATGCG
GCGGTGACGGCGACCTTGAGGTTTCATTGAATGGTCATCAAAGGCACCCA
ATTGGATGGCGTTGCCCTCGTCGTCGGCTCCGGCCGTGGCATTGGCCAAC
AAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTCTTCGCC
GACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAAGCAATA
CGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTCAACGTCACCG
ACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGAGAAGTTCGGA
CGGCTGGACTATGCCGTAAACGCTGCAGGAGTCGACAACGGCGTCCACAC
CCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTCCAGACCATCA
ACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGC
AAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCCGAGACATTGG
CCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTCGCCGGACTGC
CTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCATGGCAGTGACG
AAGATGGTTGGACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGT
GTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGA
ACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCA
GCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTC
GGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGG
CGACCTTGAGGTTTCATTGAATGGTCATCAAAGGCACCCAATTGGATGGC
GTTGCCCTCGTCGTCGGCTCCGGCCGTGGCATTGGCCAACAAGCCGCCTT
CTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTCTTCGCCGACATGAACA
CCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAAGCAATACGCCACGAAC
CCAGAATACCAATCCACTCACTTCACTGTCAACGTCACCGACCAAGACGG
CGTGCAAGCCATGGTTGACTTTATAGTCGAGAAGTTCGGACGGCTGGACT
ATGCCGTAAACGCTGCAGGAGTCGACAACGGCGTCCACACCCCCTTCGCC
GATACCGACATCGACAACTTCGACCGCGTCCAGACCATCAACGCCCGCGG
TATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGCAAGCAGGCCT
CGCGCACCTTCACCAGCCGCACCGGCACCCGAGACATTGGCCGCGGCGCC
ATTGTAAACGTCTGCTCAGCCAACTCTTTCGCCGGACTGCCTGGGAAGGG
ATCGTATACCGTCTCCAAGCATGCTTGCATGGCAGTGACGAAGATGGTTG
GACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGTGTGCCCCATC
TGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGAACCCCCAGGT
GCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCAGCTGAGAGTG
ATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTCGGCAAGTTAT
GTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGGCGACCTTGAG
GTTTCATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1527633..1528739 + |
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