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CAN33_24895-T1, CAN33_24895-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24895-T1
Unique NameCAN33_24895-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1955867..1957772-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24895-T1 ID=CAN33_24895-T1|Name=CAN33_24895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1906bp|location=Sequence derived from alignment at NKJJ01000002.1:1955867..1957772- (Aspergillus niger FDAARGOS_311)
ATGGCCGACTACAACCCCCTCTATCAGCACGGTCTTTACCTGTCGCCAGA
TCAGCAGGATCTTCTTCTGGCTGCTCTATCCTCCAACAATCCGCCTGCAA
AACAGCAGAATAATTCTCATCCCCCGGCTTCCAAGTCAGACCCAGAGTCT
ACCCCTGGAACCACAGGTAGTTACAATATGAGCCCTGCATTCGACCCCTC
TAATCCTCACTCGGGTGGCCTGGGATATGGCGATGATGAAAGTCCCTTCC
TGGACTTCAACCCCGAGCTGGACTTTGACTTTCAAGGCTCCGAGAACTTG
ATCGGTGATATTCCCGACAGCCTGCCGCAATCGGAAGAACCTGAGCCGGG
AGAGAAGCGGAAGGACATCGATGGCGATGCGGATGAGAATGAAGCTTCTG
GTAAGAAGCGAAGAGAAAGCGATGAGAAGGCGGCAAAGAAGCCAGGAAGG
AAGCCCTTGACTTCCGAGCCAACCTCAGTACGTATACTCGGTTATCGCGA
TGTGGGCGCCGAGGGTATCGTGGTACTAACAAATTTGCAGAAGCGGAAGG
CACAGAACCGAGCTGCGCAGCGAGCGTTCCGTGAACGCAAGGAGAAACAC
TTGAAGGATCTGGAAACGAAGGTAGATGAGCTTCAGAAGGCTTCTGACAA
CGCGAATCAGGAAAATGGGTTGCTACGTGCTCAGATTGACCGCCTGCAAG
TCGAACTGAGAGAATACCGCAAGCGTCTCTCCTGGCTGACCACCGGAACT
GGTGTCTCTGCCATGAATGCCATCCCAGGGGCCTACCCCAACAGCAAGGG
ATCGTACGGCCTTCAGAACAACGATTTCATGTTTGACTTCCCCAAATTCG
GGGATCTTCCGGGCTCCCACATTTTCAATAATGGCCAATTATCCAAGACG
CAGCAGAGTGCTAAAGGGGAGCCATCAACAGCAACCCCGCGTAACGACTC
TCGTGTGCCAGGTGTTGTGAGCCGTAACTCTCTGAGCAGCTCTCAGTCCA
ACGGTGTACCCGCGGGCAGGACTCCCAGCTCCGTGTCCCAGCAGGGTTCC
ACTCCTGCGTCCACGAGGAAGTCCACGCCGAAGGTGTCCATATACAACGG
CACGGCGCACTCCACCTCTACGCACGACTCCTCTACAACTGACTCGCCAT
CCTCCTCGTCCGATTCCCACCAGAGCCAGAGTCTTTCTTCCAACGGCACA
TCCCCGGAACCGACCATTAATTCTCCTGCTACTAAGGCCCACCACAATCA
CGGTGCTCATGATGGCTGCACATATACCACCATCGATGGTGAGGAATCCT
TCTGCGCGCAACTTGGCATGGCATGTGGCAATATCAATAACCCCATTCCA
GCCGTCCGGCATAACAGCCAAAGCGCGTCAAATACTCCTAGTCAGGAGGC
TCCCCACGAGGATGTTGCGGGTCTGGATATGCTCGCTCAGCAGAACGGAG
GCCAGTTCGATCCTGTTCTCTTCGGAGACTGGCGTGAGCCTCAGGATGCC
ATCCTGTCTCAGGACTTCGGAACATTCTTTGACGATGCTTTCCCCCTGCC
CGATCTGGGAAGCCCTTCACACAACCTCACGGAAGCGGCCACCCAACAAC
CACCGAAGAAGGACTTGATCGCGGAGATTGACAGCAAGTTGGATGAAGAA
GTTGTGCCTGGAGAAGACAAGTCTCAGATGCTGAGTTGCACGAAGATATG
GTATGATCATCCTGTTGTACTTCCCAATAACCACATTCGTACTGACTTCT
TAAAGGGATCGTCTGCAATCAATGGAGAGATTCCGCAACGGAGAGCTCGA
TGTCGATCATCTTTGCTCCGAACTACGCATGAAGGCGCGGTGTTCTGAGG
GCGGTGTGGTCGTCAACCAGCAAGACGTTGACGACATCATGGGGCGGGCG
AAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1955867..1957772-

>CAN33_24895-T1 ID=CAN33_24895-T1|Name=CAN33_24895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5364bp|location=Sequence derived from alignment at NKJJ01000002.1:1955867..1957772- (Aspergillus niger FDAARGOS_311)
GGATCGTCTGCAATCAATGGAGAGATTCCGCAACGGAGAGCTCGATGTCG
ATCATCTTTGCTCCGAACTACGCATGAAGGCGCGGTGTTCTGAGGGCGGT
GTGGTCGTCAACCAGCAAGACGTTGACGACATCATGGGGCGGGCGAAGTA
GAAGCGGAAGGCACAGAACCGAGCTGCGCAGCGAGCGTTCCGTGAACGCA
AGGAGAAACACTTGAAGGATCTGGAAACGAAGGTAGATGAGCTTCAGAAG
GCTTCTGACAACGCGAATCAGGAAAATGGGTTGCTACGTGCTCAGATTGA
CCGCCTGCAAGTCGAACTGAGAGAATACCGCAAGCGTCTCTCCTGGCTGA
CCACCGGAACTGGTGTCTCTGCCATGAATGCCATCCCAGGGGCCTACCCC
AACAGCAAGGGATCGTACGGCCTTCAGAACAACGATTTCATGTTTGACTT
CCCCAAATTCGGGGATCTTCCGGGCTCCCACATTTTCAATAATGGCCAAT
TATCCAAGACGCAGCAGAGTGCTAAAGGGGAGCCATCAACAGCAACCCCG
CGTAACGACTCTCGTGTGCCAGGTGTTGTGAGCCGTAACTCTCTGAGCAG
CTCTCAGTCCAACGGTGTACCCGCGGGCAGGACTCCCAGCTCCGTGTCCC
AGCAGGGTTCCACTCCTGCGTCCACGAGGAAGTCCACGCCGAAGGTGTCC
ATATACAACGGCACGGCGCACTCCACCTCTACGCACGACTCCTCTACAAC
TGACTCGCCATCCTCCTCGTCCGATTCCCACCAGAGCCAGAGTCTTTCTT
CCAACGGCACATCCCCGGAACCGACCATTAATTCTCCTGCTACTAAGGCC
CACCACAATCACGGTGCTCATGATGGCTGCACATATACCACCATCGATGG
TGAGGAATCCTTCTGCGCGCAACTTGGCATGGCATGTGGCAATATCAATA
ACCCCATTCCAGCCGTCCGGCATAACAGCCAAAGCGCGTCAAATACTCCT
AGTCAGGAGGCTCCCCACGAGGATGTTGCGGGTCTGGATATGCTCGCTCA
GCAGAACGGAGGCCAGTTCGATCCTGTTCTCTTCGGAGACTGGCGTGAGC
CTCAGGATGCCATCCTGTCTCAGGACTTCGGAACATTCTTTGACGATGCT
TTCCCCCTGCCCGATCTGGGAAGCCCTTCACACAACCTCACGGAAGCGGC
CACCCAACAACCACCGAAGAAGGACTTGATCGCGGAGATTGACAGCAAGT
TGGATGAAGAAGTTGTGCCTGGAGAAGACAAGTCTCAGATGCTGAGTTGC
ACGAAGATATGATGGCCGACTACAACCCCCTCTATCAGCACGGTCTTTAC
CTGTCGCCAGATCAGCAGGATCTTCTTCTGGCTGCTCTATCCTCCAACAA
TCCGCCTGCAAAACAGCAGAATAATTCTCATCCCCCGGCTTCCAAGTCAG
ACCCAGAGTCTACCCCTGGAACCACAGGTAGTTACAATATGAGCCCTGCA
TTCGACCCCTCTAATCCTCACTCGGGTGGCCTGGGATATGGCGATGATGA
AAGTCCCTTCCTGGACTTCAACCCCGAGCTGGACTTTGACTTTCAAGGCT
CCGAGAACTTGATCGGTGATATTCCCGACAGCCTGCCGCAATCGGAAGAA
CCTGAGCCGGGAGAGAAGCGGAAGGACATCGATGGCGATGCGGATGAGAA
TGAAGCTTCTGGTAAGAAGCGAAGAGAAAGCGATGAGAAGGCGGCAAAGA
AGCCAGGAAGGAAGCCCTTGACTTCCGAGCCAACCTCAGGATCGTCTGCA
ATCAATGGAGAGATTCCGCAACGGAGAGCTCGATGTCGATCATCTTTGCT
CCGAACTACGCATGAAGGCGCGGTGTTCTGAGGGCGGTGTGGTCGTCAAC
CAGCAAGACGTTGACGACATCATGGGGCGGGCGAAGTAGAAGCGGAAGGC
ACAGAACCGAGCTGCGCAGCGAGCGTTCCGTGAACGCAAGGAGAAACACT
TGAAGGATCTGGAAACGAAGGTAGATGAGCTTCAGAAGGCTTCTGACAAC
GCGAATCAGGAAAATGGGTTGCTACGTGCTCAGATTGACCGCCTGCAAGT
CGAACTGAGAGAATACCGCAAGCGTCTCTCCTGGCTGACCACCGGAACTG
GTGTCTCTGCCATGAATGCCATCCCAGGGGCCTACCCCAACAGCAAGGGA
TCGTACGGCCTTCAGAACAACGATTTCATGTTTGACTTCCCCAAATTCGG
GGATCTTCCGGGCTCCCACATTTTCAATAATGGCCAATTATCCAAGACGC
AGCAGAGTGCTAAAGGGGAGCCATCAACAGCAACCCCGCGTAACGACTCT
CGTGTGCCAGGTGTTGTGAGCCGTAACTCTCTGAGCAGCTCTCAGTCCAA
CGGTGTACCCGCGGGCAGGACTCCCAGCTCCGTGTCCCAGCAGGGTTCCA
CTCCTGCGTCCACGAGGAAGTCCACGCCGAAGGTGTCCATATACAACGGC
ACGGCGCACTCCACCTCTACGCACGACTCCTCTACAACTGACTCGCCATC
CTCCTCGTCCGATTCCCACCAGAGCCAGAGTCTTTCTTCCAACGGCACAT
CCCCGGAACCGACCATTAATTCTCCTGCTACTAAGGCCCACCACAATCAC
GGTGCTCATGATGGCTGCACATATACCACCATCGATGGTGAGGAATCCTT
CTGCGCGCAACTTGGCATGGCATGTGGCAATATCAATAACCCCATTCCAG
CCGTCCGGCATAACAGCCAAAGCGCGTCAAATACTCCTAGTCAGGAGGCT
CCCCACGAGGATGTTGCGGGTCTGGATATGCTCGCTCAGCAGAACGGAGG
CCAGTTCGATCCTGTTCTCTTCGGAGACTGGCGTGAGCCTCAGGATGCCA
TCCTGTCTCAGGACTTCGGAACATTCTTTGACGATGCTTTCCCCCTGCCC
GATCTGGGAAGCCCTTCACACAACCTCACGGAAGCGGCCACCCAACAACC
ACCGAAGAAGGACTTGATCGCGGAGATTGACAGCAAGTTGGATGAAGAAG
TTGTGCCTGGAGAAGACAAGTCTCAGATGCTGAGTTGCACGAAGATATGA
TGGCCGACTACAACCCCCTCTATCAGCACGGTCTTTACCTGTCGCCAGAT
CAGCAGGATCTTCTTCTGGCTGCTCTATCCTCCAACAATCCGCCTGCAAA
ACAGCAGAATAATTCTCATCCCCCGGCTTCCAAGTCAGACCCAGAGTCTA
CCCCTGGAACCACAGGTAGTTACAATATGAGCCCTGCATTCGACCCCTCT
AATCCTCACTCGGGTGGCCTGGGATATGGCGATGATGAAAGTCCCTTCCT
GGACTTCAACCCCGAGCTGGACTTTGACTTTCAAGGCTCCGAGAACTTGA
TCGGTGATATTCCCGACAGCCTGCCGCAATCGGAAGAACCTGAGCCGGGA
GAGAAGCGGAAGGACATCGATGGCGATGCGGATGAGAATGAAGCTTCTGG
TAAGAAGCGAAGAGAAAGCGATGAGAAGGCGGCAAAGAAGCCAGGAAGGA
AGCCCTTGACTTCCGAGCCAACCTCAGGATCGTCTGCAATCAATGGAGAG
ATTCCGCAACGGAGAGCTCGATGTCGATCATCTTTGCTCCGAACTACGCA
TGAAGGCGCGGTGTTCTGAGGGCGGTGTGGTCGTCAACCAGCAAGACGTT
GACGACATCATGGGGCGGGCGAAGTAGAAGCGGAAGGCACAGAACCGAGC
TGCGCAGCGAGCGTTCCGTGAACGCAAGGAGAAACACTTGAAGGATCTGG
AAACGAAGGTAGATGAGCTTCAGAAGGCTTCTGACAACGCGAATCAGGAA
AATGGGTTGCTACGTGCTCAGATTGACCGCCTGCAAGTCGAACTGAGAGA
ATACCGCAAGCGTCTCTCCTGGCTGACCACCGGAACTGGTGTCTCTGCCA
TGAATGCCATCCCAGGGGCCTACCCCAACAGCAAGGGATCGTACGGCCTT
CAGAACAACGATTTCATGTTTGACTTCCCCAAATTCGGGGATCTTCCGGG
CTCCCACATTTTCAATAATGGCCAATTATCCAAGACGCAGCAGAGTGCTA
AAGGGGAGCCATCAACAGCAACCCCGCGTAACGACTCTCGTGTGCCAGGT
GTTGTGAGCCGTAACTCTCTGAGCAGCTCTCAGTCCAACGGTGTACCCGC
GGGCAGGACTCCCAGCTCCGTGTCCCAGCAGGGTTCCACTCCTGCGTCCA
CGAGGAAGTCCACGCCGAAGGTGTCCATATACAACGGCACGGCGCACTCC
ACCTCTACGCACGACTCCTCTACAACTGACTCGCCATCCTCCTCGTCCGA
TTCCCACCAGAGCCAGAGTCTTTCTTCCAACGGCACATCCCCGGAACCGA
CCATTAATTCTCCTGCTACTAAGGCCCACCACAATCACGGTGCTCATGAT
GGCTGCACATATACCACCATCGATGGTGAGGAATCCTTCTGCGCGCAACT
TGGCATGGCATGTGGCAATATCAATAACCCCATTCCAGCCGTCCGGCATA
ACAGCCAAAGCGCGTCAAATACTCCTAGTCAGGAGGCTCCCCACGAGGAT
GTTGCGGGTCTGGATATGCTCGCTCAGCAGAACGGAGGCCAGTTCGATCC
TGTTCTCTTCGGAGACTGGCGTGAGCCTCAGGATGCCATCCTGTCTCAGG
ACTTCGGAACATTCTTTGACGATGCTTTCCCCCTGCCCGATCTGGGAAGC
CCTTCACACAACCTCACGGAAGCGGCCACCCAACAACCACCGAAGAAGGA
CTTGATCGCGGAGATTGACAGCAAGTTGGATGAAGAAGTTGTGCCTGGAG
AAGACAAGTCTCAGATGCTGAGTTGCACGAAGATATGATGGCCGACTACA
ACCCCCTCTATCAGCACGGTCTTTACCTGTCGCCAGATCAGCAGGATCTT
CTTCTGGCTGCTCTATCCTCCAACAATCCGCCTGCAAAACAGCAGAATAA
TTCTCATCCCCCGGCTTCCAAGTCAGACCCAGAGTCTACCCCTGGAACCA
CAGGTAGTTACAATATGAGCCCTGCATTCGACCCCTCTAATCCTCACTCG
GGTGGCCTGGGATATGGCGATGATGAAAGTCCCTTCCTGGACTTCAACCC
CGAGCTGGACTTTGACTTTCAAGGCTCCGAGAACTTGATCGGTGATATTC
CCGACAGCCTGCCGCAATCGGAAGAACCTGAGCCGGGAGAGAAGCGGAAG
GACATCGATGGCGATGCGGATGAGAATGAAGCTTCTGGTAAGAAGCGAAG
AGAAAGCGATGAGAAGGCGGCAAAGAAGCCAGGAAGGAAGCCCTTGACTT
CCGAGCCAACCTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24895CAN33_24895Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24895-T1CAN33_24895-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24895-T1.cdsCAN33_24895-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24895-T1.exon3CAN33_24895-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_24895-T1.exon2CAN33_24895-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24895-T1.exon1CAN33_24895-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013910
DBxrefInterPro:IPR023167
DBxrefInterPro:IPR004827
DBxrefPFAM:PF08601
DBxrefPFAM:PF00170
ProductTranscription factor PAP1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1955867..1957772 -
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